G129635


Basic Information

Item Value
gene id G129635
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056717.1
NCBI id CM032086.1
chromosome length 20532727
location 719320 ~ 722311 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU191441
CAGTCAAGATGTTTATTTCTCATCTTATTTCACATTCAAGCCTTTGTAACGTATTTTGAAAAGGAGCTCAAATACAAACTTTGCAAGTAACCCACACGCCGTATCTACACGTTCGGTGTGTGGGATCTCTTCAGCATTGACAGACACTTACACGACGTTACGTCCTCTCACGTGAGGGTTCAGAGGAAGAACGTTCAAGACCTCCACGACGCGATGTGGGCATATGATGTTTTAGCACCGTTTCACCAAAAAGGAGCGATGAAAACCATTACACAGCTGTCGGAGTCTCTTTCTTGAGTGTGAAACAAAACCTCcatattccaaaaaataaaaaggatgcGTACCGAGAAAACAGCAATAGAGGTTTTAACGTGTGCCGCTAGCTCGAAACAAAAGCGtttatttgctgaataaaatgcagCAGTCGCATTTTGTAGAACTCTGGAATGATTGCTTCTCTACTGATTAACTAGGTGCCGATGTATTATTGTAAATCAAATTTCAAACAGGACCCCCGTATTGCTTTACATAAAGCACTACAGCATTCTTTAAGAGGACCCGATCCAAATCGCTCAAACTGGACATATACATTCAAGTGGAAGGTCGAAAGCGGATCCACCTGGCGAGATGAATCCAATCAGCAGCAATATTTTGAGCCCACTGATACAGTATGACGCCGGTTGAAACGTCAAAACGATTGCTGTTTTGGAATGTCTAGCATGCACATAGATTCAACGCGTTCTAATCGAACGTTCTCAATGAACGATTCATGCATACAAGCCGCTATTGTAAAGTGCCGTTATAACAACAGTTTTAAATTCGAAATAAAAACCTCGGACCGTATATAGGGAGAGTTACATCTCAGGGTTATACCACAAATGTTATTTACAGGTTAACAAGTGCCTGACGAGATAGGAACGGTCCCGTTTAATCGGAATAAACAAACCAAACttacaaaacctaaaaaaatgcGGTGCAGATTATAAACGAAATCGTCTTGCACGAAAACAACAGACATTCAGCAACATATTGTGATAAAACACAGCTGTACATCGCCGATGATCACTTATTGGCCAGTAGAGGGCAGTGATGTGCAAGACCACAATGACGGCGTCATTTCAGACCACCTATTCACCAAGGTATAAAAAGCATTAAGTAATGATATTAGCAAACGATTCCTCACATTCAGGGCTACAGTGACAAAACACAGCAaccaaatattgtaaaatgttgagAAGCCTATCGCAATTAACTCTTTTACAAATCGCCGGGGGCGGGTCTCGAGTCTCTATGGCTATGacctgaaaataaacacaaaagcacagaCATGTTTAATGCATGTACAACTGCTTAACtctgaaaaaaaaggattaGCTTGATTTCTGATCCTGTTCAGGTTTTGTTTACGCTTGTTGGTATCCCAGCTAGGCTAGCTGCTGTAGTGCCTAAAACTAGTTTGAAACCGGTAAACCAGACCACCTTAGGCTGTTCGTTTTAGAAGTAGGTGTTAAGCGCGCAAACTCGGTAAAACCCCAATCCGACCGCTCTGAATGAACTTCACACAGTGGCTATGGCAAATTCTGCTCTCCGGGCAGCAGTCAGAGTGAAACATTCATTTGGTCTCGGTCCAAACTGCAGCCTCAGTGTCCCAAAATGTGGTTCTCTCTGCCAGCGGTGACCCTGTACTCAGTAACGAGGAGAAAAGCAGTGCACAATACAATCAATGGTGCCATTACACTCTTGAGGTCAAACCGCAATGCTCTGAAACGACAAACAGCAGCATGGATCCATCTAGAACATATCGCTCTAAAGATCTGTACCGACTGCTGAGCGTTAATAAATCTTTGGCTGAATGTGAATGTCCTGCTATGAGATGGATGTGAGAACCCTCATCCTCCCAAGTCTTTATTTCTCCTGAGTTGAGAGCGAATGTGACAGAAAGCATTATCAAAGTGGCTTAGTTGTACCCTGTGCGTAAGAAAGACAAGATATACGAGTATCATTGCAGAACCTGATAGCACAGACACAAAATGGACATTTTCCTCAGCAGTATCAAAGTATAAGATCCTCACTGACTAAAATGGCTTCTAGCTGTTCGTTTATGACTGCAAACATGCTTTTGATGTGGCATAGACCGTGatacatatatttctatatcATAAGCGTTTCTGGATTGAAACAAgctttaactaaaactaaagatACATGTGCGCAATTTTGGCGAAACGCTGTGGGCCAAAAAGGGTAACTGTATAATGTCAACAGTGAATTATGAAGCGCAGCTCACGCAAAAGTCACACCAAGCAGATATCTGTTGGTCAATGTGGCAAATTCACAAGCAAAATCTGCAAGTTGAAATCAATTGCcctcttgtaaaaaaaaaaaaaatccagattcCTACCCAGATTTTGTCTGTGAAAATTCGCCTAGAAACGGTAAATGTGATCGCATCTTAACACCGAtcaaagagagaagagaaaaacaaatcttcAAGCGGATGTAGCAAAAACACATAATGAAAGCTGGCATTCGGCTGAGAAGTGCGTACACGCTCTACCTTGCGAATGACacttctgttctctctctgaGTATGTGACTGTTTGAAGGCAAGCATGAGAATCTGGCTCTGAGAATGAGGGAGGTAGAGACTCTGCTTCGGTTGCGATCGTCTAATCGACTCCCCAAAGTGTTCGCTCCTACAATCTGTTCCCCTTCTGCTGTCAGTCAGTCGTGGCGCTAACTGAGCCCAACCAATTCAAACACGCTGTCCCGCTATCTCTCTGTGACGTCATCACTTCCACACGTGTGACCCGAGCATTGGATTTGAACCGGGAGCAGCCGCCCCACCCATGGGCTGCCCGTATCCCATCATGTTATTGGCACCGTAGAAATTCGTTCCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191441 True 2903 lncRNA 0.43 2 719320 722311

Neighbor

gene id symbol gene type direction distance location
col9a2 col9a2,LOC107722164,LOC107669993,LOC107698977,LOC107712764 coding downstream 13647 688221 ~ 705673 (-)
phf14 phf14,LOC107722156,LOC107670007,LOC107712766,LOC107698992 coding upstream 14711 737022 ~ 810882 (-)
nxph1 nxph1,LOC107670023,LOC107566937,LOC107555956,LOC107712631,LOC107722163,LOC108410782,LOC108272426,LOC107698976 coding upstream 200575 922886 ~ 955788 (-)
LOC122323800 thsd7aa,LOC107670038,LOC107722152,LOC107698991,LOC108410784 coding upstream 237132 959443 ~ 993648 (-)
LOC122323802 LOC107664710 coding upstream 372679 1094990 ~ 1112229 (-)
dlgap3 dlgap3,LOC107664711,LOC107563279,LOC107698989,LOC107712634,LOC107722119 coding upstream 394660 1116971 ~ 1248823 (-)
G129618 adgrb2,LOC107722142,LOC107669951,LOC107712761 non-coding downstream 181517 521875 ~ 537803 (-)
LOC122324168 NA non-coding upstream 140978 863289 ~ 894898 (-)
G129714 cx39.4,LOC107563282,LOC107664709,LOC107726142,LOC107712627,LOC107698984,LOC107555947 non-coding upstream 534234 1256545 ~ 1258314 (-)
G129717 NA non-coding upstream 549913 1272224 ~ 1272429 (-)
G129728 NA non-coding upstream 570320 1292631 ~ 1293279 (-)
G129731 NA non-coding upstream 589875 1312186 ~ 1313269 (-)
thsd7aa NA other upstream 294844 1017155 ~ 1052124 (-)
LOC122323272 NA other upstream 349840 1072151 ~ 1094903 (-)
smim12 smim12,LOC107664707,LOC107726140,LOC107563281,LOC107712635,LOC107555952,LOC107698988 other upstream 556601 1278912 ~ 1280509 (-)
pef1 pef1,LOC107664714,LOC107726139,LOC107698987,LOC107712637 other upstream 559228 1281539 ~ 1287206 (-)
G129738 NA other upstream 776377 1498688 ~ 1499406 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014212 NA non-coding NC_007130.7 CM002903.2 38378399 ~ 38384624 (+)
grasscarp (Ctenopharyngodon idella) CI01000054_03964701_03964965 NA coding CI01000054 null 3964690 ~ 3964965 (-)