fkbp3 (fkbp3,LOC107717646)


Basic Information

Item Value
gene id fkbp3
gene name fkbp3,LOC107717646
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26235419 ~ 26242824 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219090.1
GGCTGCTGACGGGCACGTGGTTCGTCGATGATGGCGGCCGATCCGGAGCGAGAGTGGAGCGATGAGCAGCTCAAGAGTGAAGAAGTCCCGAAGAAACATGTGATCAAATTCATCCAGGACAACGCAGCGCACTCGTTTCTAGTGGAGCACAAGCTTCTTGGAAGCATCAAGAATGTGGCGAAGACAGTGAAGAAGGAGCAGCTGGTGGAGGCCTATCAGCAGCTGTTTGAGAGCAAgAGGTTCAAGGGCTCAGAAGAGGACAGTGTGACGGAGCAGGTTCAAGCTGTTAAAATTAGTGACGCTCCCAAAGAAACCAAGACGGAGCCGGAGGATGAGGGGCCTCCGAAGTTCACTAAGAGCATCCTGAAGAAAGGAGACAAGACCAACTTCCCCCGGAAAGGAGACACTGTGAGCTGCTGGTATACAGGAACACTGGAGGACGGAAGTGTGTTCGACAGCAACATCCCCGCCActgcaaaaaagaagaaacagagcAAGCCGCTGAGTTTTAAGGTGGGGATGGGGAAAGTCATCCGAGGGTGGGATGAAGGTCTGCTGACGATGAGTAAAGGCGAGACGGCTCGGCTGGAGATCGAGTCTGAATGGGCGTACGGGAAGAAAGGTCTTCCAGACTCCAAAATCCCGCCGAACGCCAAGCTGATCTTCGAGGTGGAGCTCGTCTCCATCGACTGAGCGCTCGGGGAACGACGAGACCTTCAGTGAAACCTTCTTCAGTCTGGCAGAGATTTCTCTTTCTATTTTTGCATGattgtaaaaattacaataaaaaccaACCCTGAGTAA

Function

symbol description
fkbp3 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Is expressed in alar plate midbrain region; immature eye; nervous system; pectoral fin musculature; and pharyngeal arch 3-7 skeleton. Orthologous to human FKBP3 (FKBP prolyl isomerase 3).

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP3 isoform X2

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0005634 nucleus cellular_component
GO:0016020 membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09570 FKBP3; FK506-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219090.1 True 804 mRNA 0.52 7 26235419 26242824

Neighbor

gene id symbol gene type direction distance location
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding downstream 18956 26214663 ~ 26216463 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding downstream 24234 26197579 ~ 26211185 (-)
actr10 actr10,LOC106608088 coding downstream 51329 26176901 ~ 26184090 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding downstream 59349 26168534 ~ 26176070 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding downstream 72368 26159166 ~ 26163051 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding upstream 42989 26285813 ~ 26287605 (-)
LOC122324888 NA coding upstream 45013 26287837 ~ 26288247 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding upstream 46945 26289769 ~ 26292156 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding upstream 56673 26299497 ~ 26301875 (-)
LOC122325330 NA coding upstream 64577 26307401 ~ 26307812 (-)
G142280 NA non-coding downstream 3936 26230306 ~ 26231483 (-)
G142282 NA non-coding downstream 43501 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 60540 26149891 ~ 26174879 (-)
G142247 NA non-coding downstream 158346 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 179854 26018719 ~ 26055565 (-)
G142297 NA non-coding upstream 25088 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 26813 26269637 ~ 26270044 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 68387 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 77046 26319870 ~ 26320141 (-)
G142349 NA non-coding upstream 121195 26364019 ~ 26381273 (-)
G142278 NA other downstream 1174 26232024 ~ 26234245 (-)
G142281 NA other downstream 47500 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 138448 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 180950 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 481411 25747667 ~ 25754008 (-)
rps29 NA other upstream 240497 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 679991 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 986979 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1233270 27476094 ~ 27478227 (-)

Expression


Co-expression Network