G142444 (slc25a45,LOC107722745,LOC107702892,LOC107662097)


Basic Information

Item Value
gene id G142444
gene name slc25a45,LOC107722745,LOC107702892,LOC107662097
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26922815 ~ 26924987 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210476
tatcccagcatgtTAATATCGTTTGAAAGCCATAATATGATCCTCTTTTCCTCCCACGTTTAAACTTACGATGGTGTGGATCGCTCATGAAATGGCAGGATTTTGCTGAGCGTCAGTAAAAGGGCTATGTTGCtacaactaataaaaatacGACACCGTCTGGTCGCTAGCTTTTAGCGTAATGAATAATGCAGCCTACGGAAACAGTCACCAAGAGAATCGGTGTGcaaaacatgaagaaaagaCTCCTATTCCAGTCACTGGACGTATCAAAATCGGCACAGAGCTTATTTATAGGTACTAACGGAGTTTTTGCAGGCCGACTCATCAGTTCGCATCATTCTGAATCTGTAGGATTTTCCCATTGGCTTTTGGATTACTGCAAAAAATATTGTAAGATCTGTAGCCAACGAAGGCTTCTTCAGTCTATAAATTTGAAAGCCTTGAAGCTATATATACAAACGCAGGCTATAAATGAACTACAAACGTGTTACCATCACTGACCTTCAGATTGAAATGTTGATTTTGTCACTAAAGTCTGAGTAAATCaatcatcaatttttttttttttttttttttttttacacaacctTGTTCCCAAACATTAGACATCCACGTCTGAAAGCAATGACCGCATTTATGGCATTTCGTGTGCTCGCTTTGAGGCGCAAGTAATTcatcataaatgaaaattattatattcgGTGGTTCtcttattttatacaatattccAGTTTTGAGCACAAGTGTTCACATTCTGTGGATGGAAACGACTACTGATGTATTTTACGGCCTAGAATAAACTGTGAAGATAGCTTGTGTTCACCACAGACCTTATTTCAgccatttaacaaaaaaaagaggaaagaatGATGGAACTgattgaaaatgctaatttgtgaACTCATTTTGGCTTGCaaaaatcatcatcatcctgCGGCCAACCCCTCAGTTCTGGGAGGAGTCGGTCATGGCTCTCAGCAGCATCTCGTAGCTGAGGAAGGTTACAGCGTTCACAGGGAACGCTCTCACGCTGTTCAGAAGAAGGCCTTTGAAGAAAACCCGCATGCCCTCCTCACGCACGCTTACAGTAATGCAGTTCAGCACACCGCTGTACATGCGACCGCCGCCGCCACACATCTGCAGTCGAGCCTTCACCACATCCATGGGGGTGGCACAGGCCCATGTGACCACACCAGCAACGCCACCAGCCACCAGCACAGCAGTGTTACCTGAAGACCACATTTTGCTTACCACTTGCTTTATCAGAACATGCATTTTGCTAACTATTTAGTAAATAATTAGTCCTAATGAATGAGTAAATTCTATGTATGTTCTATGTAATAATTCAGTGAtttgcaaaagtattcatacccctaTTTTTTCACATCGCCCTACATCAATATAATCCATACTGCCAAAGCAAAAACTTACctaaatatttagctgaagCATCTTTACACCCTCAAGGCTTTCTCATCGTCAATTTGGCAATTATCTGCCAGTCTTCTCAAGTTTCAACTCTGAAGCTCTGTCAGGTGGGGGAAGATGTACATGTTCAGGCTTCTCCAAAATAATTgatagggttttttttccaggcTGTGGCTGGGCCACTCAAGGACGTTCACAGAGTTGTCTATGTGTGCTTGGGGTCATTGTCCTATTAAAATGTGAACCTTCTGCAAAGTCTGAGTATCTGAATGAAGGCTATCTCTATATTGTGCTGCACTGAGTACTCCTTCTACTCTGATAAATTCTTTAATCCCTGGTGTTgaaaaacagccccacagcatgaggCTGCTACCAGCACACTTTATTTTTGGGATGTTTGCAGGTGATGAGCAGAGCTGGTTTCCTTCAAATATGATCCTTAGAAATTGAGGTTCATCAGAGCAgagaattaatttgttttaggtGCTTATTTGCAAATTTCCAAAAGTGTgtatgaatacttttgcaaaGGCACTGTATGATACTACAAagatactaatatatatataatatgctatacatttaatacataaaaataaacaacataagataaaatattctattatgaatgtactgtaaatctaaattcatatttttgaaaagaattttgaatcattaaaattaaatatgcaacattttaaatgtaatatcatcaccatcatcaactacaagcttaaaaatg

Function

symbol description
slc25a45 Predicted to enable acyl carnitine transmembrane transporter activity. Predicted to be involved in acyl carnitine transport and amino acid transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: solute carrier family 25 member 45-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210476 True 2173 TUCP 0.39 1 26922815 26924987

Neighbor

gene id symbol gene type direction distance location
trnas-gcu_32 NA coding downstream 308085 26614643 ~ 26614730 (-)
LOC122325332 wdr20,LOC107730607,LOC107564583,LOC107704379 coding downstream 348802 26569767 ~ 26574013 (-)
LOC122325425 mdga2,LOC107704381,LOC107556994,LOC108257548,LOC108411484,LOC106571582,LOC106608140 coding downstream 482892 26325231 ~ 26439923 (-)
LOC122325330 NA coding downstream 615003 26307401 ~ 26307812 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding downstream 620940 26299497 ~ 26301875 (-)
ganaba zgc:171967,LOC107662060,LOC107702959,LOC107722752,LOC107548499,LOC108427707 coding upstream 1246 26926233 ~ 26940284 (-)
her7 LOC107548512,LOC107662101,LOC107740036,LOC107556023,LOC107722746,LOC107702916 coding upstream 22343 26947330 ~ 26948895 (-)
LOC122325133 LOC107560346,LOC107740038,LOC107662093 coding upstream 221489 27146476 ~ 27148045 (-)
mtif3 LOC107719760,LOC107662074,LOC107560337,LOC107702912,LOC107576280 coding upstream 411508 27336495 ~ 27339099 (-)
zgc:152816 LOC107719757,LOC107662076,LOC107560316,LOC107702950,LOC107573841,LOC107752252 coding upstream 462303 27387290 ~ 27404395 (-)
G142440 LOC107397203 non-coding downstream 8534 26913969 ~ 26914281 (-)
G142439 LOC102197881 non-coding downstream 8957 26912869 ~ 26913858 (-)
G142438 NA non-coding downstream 13434 26909126 ~ 26909381 (-)
LOC122325367 NA non-coding downstream 164612 26750583 ~ 26758203 (-)
G142384 NA non-coding downstream 206106 26716192 ~ 26716709 (-)
G142464 NA non-coding upstream 115238 27040225 ~ 27093696 (-)
G142515 NA non-coding upstream 290645 27215632 ~ 27298876 (-)
G142520 slc25a11,LOC107560342,LOC107702890,LOC107752240,LOC107557769 non-coding upstream 350384 27275371 ~ 27276189 (-)
G142521 NA non-coding upstream 353933 27278920 ~ 27281441 (-)
G142529 NA non-coding upstream 408310 27333297 ~ 27333716 (-)
rps29 NA other downstream 362428 26483321 ~ 26560387 (-)
G142278 NA other downstream 688570 26232024 ~ 26234245 (-)
G142281 NA other downstream 734896 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 825844 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 868346 26050829 ~ 26054469 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 304816 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 551107 27476094 ~ 27478227 (-)

Expression


Co-expression Network