LOC122325332 (wdr20,LOC107730607,LOC107564583,LOC107704379)


Basic Information

Item Value
gene id LOC122325332
gene name wdr20,LOC107730607,LOC107564583,LOC107704379
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26569767 ~ 26574013 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220347.1
GTGCACAAAGCGGAATGAATACTAATGTGGAAGATGGCGGCGGAGGGAGGTGGGAAGGAGGCGAACGAAATTAAAACTCAGTTCAGCACACGGGAGGGCGTCTACAAACTTCTGCCGAACTCCGAGTACAGCCGACCGAACCGCGTGCCGTTCAACTCGCAGGGCTCGAACCCGGTCAAAGTGTCGTTCGTGAACGTGAACGACCAGTCCGGGAACGGCGAGAGAATCTGTTTCAATGTGGGCCGGGAgctttacttttacatttataaaggcGTCAAGAAGGCCGCCGACCTGAGCAAACCTGTGGACAAGAGGATCTATAAGGGAACGCTCCCCACGTGTCACGACTCCAACGCGCTGACGGCCACGGCGGAGAGCGTCTCGCTGCTGGTGGGCTTTTCCGCAGGGCAAGTACAGCTCATTGACCCCATCAAAAAGGAAACCAGCAAGCTTTTTAACGAAGACAGACTAATCGATAAGTCTGCGGTGACGTGTTTGAAGTGGGTCCCGGGTTCAGAGCACCTGTTCCTGGTGGCTCATGGCAGCGGTTGTTTGTACCTGTACAACGTGGAGCACACCTGCGGGACGACGCCGCCTCATTATCAGCTCCTCAAGCAAGGCGAGAGCTACGCCGTTCACACCGGCAAGAGCAAGTCGGCCCGCAATCCTCTCCTCCGCTGGACAGTGGGCGAAGGGGCGGTGAACGAATTCGCTTTCTCGCCCGACGGAAAGTTCCTGGCCTGCGTCAGTCAGGATGGATTCCTTCGTGTCTTCAGCTTCGACGCGACCGAGCTGCGAGGCACGATGAAGAGCTACTTCGGCGGGCTGCTATGCGTTTGCTGGAGCCCCGACGGACGGTTCATCGTAACCGGGGGCGAGGACGATCTCGTGACGGTCTGGTCGTTTTCGGACGCCAGGGTCGTCGCTCGAGGACGAGGCCACAAATCGTGGGTGAGCGTCGTTGCGTTCGATCATTGCATCACTAGCGTTCAGGACTGCGAAGCGCCGGCGGAGTTCAGCGGAAGCGACGAGGACTTCCGCGACAACGCGCAATACAACGGAAATCGCGAGCGGGCGAATAGCACGCAATCTAGAATATCCAAACGAAACTCTACGAACGGTAGCGTGACGTACCGGTTCGGCTCGGTCGGTCAGGACACTCAGCTATGCTTATGGGACCTCACGGAAGACGTTCTGTTTCCGTTATCAAGAACGAGGACTCAAACTAACGCGATGAGTGCGGAAACCGGCACTAACGGCAACAACAGCGCGAATTCTTCGCTGCCGCGCTCAAACAGTTTGCAGCACTCGACGGCCGGCAGCCCGAACAGCAACAAACCGGCCGGCATCGTAGACGGCGCTTTGATCGCGACCGGCGTCAGCAAGTTCGCGACGTTGGCTCTGCACGAGGTGCGCAAGGAGCGGAATCAGGAGAAGGAGCACAAGCGCAATCACAGCATAAGCTACATCAGCAACAAGAGCAGCGACAAGCTCAACCAGATCATCGGCCCTCGAGCGGCTAAAACGGACGTCGCGAAGACGCTGGGGACGACGTCGTGTCCGCGCATGGAGGAAATCCCGCTTCTGGAGCCGCTGGTGTGCAAGAAAATCTCCACGAGACTCACGGTGTTGATCTTCCTCGAGGACTGCTTGGTCACCGCCTGCCAGGAGGGATTCGTTTGCGCGATGGCGCGGCCTGGGAAAGTGGGTCTGTTGTCGTCTCAGAACCAGGCCAGCTCTCCCAGCGGGACAGTCGTATAGCGGCTCTTCGGACG

Function

symbol description
wdr20 Predicted to be located in nucleoplasm.

NR:

description
PREDICTED: WD repeat-containing protein 20-like

GO: NA

KEGG:

id description
K24741 WDR20; WD repeat-containing protein 20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220347.1 True 1775 mRNA 0.58 5 26569767 26574013

Neighbor

gene id symbol gene type direction distance location
LOC122325425 mdga2,LOC107704381,LOC107556994,LOC108257548,LOC108411484,LOC106571582,LOC106608140 coding downstream 129844 26325231 ~ 26439923 (-)
LOC122325330 NA coding downstream 261955 26307401 ~ 26307812 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding downstream 267892 26299497 ~ 26301875 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding downstream 277611 26289769 ~ 26292156 (-)
LOC122324888 NA coding downstream 281520 26287837 ~ 26288247 (-)
trnas-gcu_32 NA coding upstream 40630 26614643 ~ 26614730 (-)
ganaba zgc:171967,LOC107662060,LOC107702959,LOC107722752,LOC107548499,LOC108427707 coding upstream 352220 26926233 ~ 26940284 (-)
her7 LOC107548512,LOC107662101,LOC107740036,LOC107556023,LOC107722746,LOC107702916 coding upstream 373317 26947330 ~ 26948895 (-)
LOC122325133 LOC107560346,LOC107740038,LOC107662093 coding upstream 572463 27146476 ~ 27148045 (-)
mtif3 LOC107719760,LOC107662074,LOC107560337,LOC107702912,LOC107576280 coding upstream 762482 27336495 ~ 27339099 (-)
G142362 NA non-coding downstream 14214 26547188 ~ 26555553 (-)
G142356 NA non-coding downstream 89982 26479302 ~ 26479785 (-)
G142355 LOC102197881 non-coding downstream 90571 26478551 ~ 26479196 (-)
G142354 NA non-coding downstream 97007 26472357 ~ 26472760 (-)
G142349 NA non-coding downstream 188494 26364019 ~ 26381273 (-)
G142381 NA non-coding upstream 100416 26674429 ~ 26674883 (-)
G142384 NA non-coding upstream 142179 26716192 ~ 26716709 (-)
LOC122325367 NA non-coding upstream 176570 26750583 ~ 26758203 (-)
G142438 NA non-coding upstream 335113 26909126 ~ 26909381 (-)
G142439 LOC102197881 non-coding upstream 338856 26912869 ~ 26913858 (-)
rps29 NA other downstream 9380 26483321 ~ 26560387 (-)
G142278 NA other downstream 335522 26232024 ~ 26234245 (-)
G142281 NA other downstream 381848 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 472796 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 515298 26050829 ~ 26054469 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 348802 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 655790 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 902081 27476094 ~ 27478227 (-)

Expression


Co-expression Network