actr10 (actr10,LOC106608088)


Basic Information

Item Value
gene id actr10
gene name actr10,LOC106608088
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26176901 ~ 26184090 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220325.1
GGCAGCCATTCCGAAGGACCCCGCCCTTCCCTCAGAGGCTATGAGTGACAGCGCAGTGTTTACACGTCTATAATTCTGTTTTCTGATATTTGTATTCGTTTCAAGCGATAAACATGCCCTTGTTCGAAGGCTTGGGCAGCGGAGGAGAGAAGACAGCAGTAGTCATTGATCTAGGAGCGGCCTACACGAAATGTGGTTTTGCTGGCGAGACGGGGCCGAGGTTCATCATTCCCAGCGAAATTAAACCCGCCGGATCTCAGGAGGCTGTGAGAGTCGTTCAGTACAACATCAACACCGAGGAGCTCTACAACATCCTGAAGGAGTTCGTTCATCAGCTGTACTTCCGGCATCTGCTGGTGAATCCCCGAGACCGGCGCGTGGTGGTCATTGAATCCATCCTGTGTCCTTCACACTTCAGAGAGACACTCTCCAGAGTCTTCTTCAAGCACTTTGAGGTCCCGTCGGTCCTGTTCGCTCCGAGTCATCTGATGTCCGTCATGACTCTGGGCATCCAGTCTGCTCTCGTCATGGACTGTGGATATACAGAGACGCTGGTGTTACCAATCTACGAGGGCATCCCGATCCTGTCTGCGTGGGAAGCTCTGCCGATGGGAGGAAAAGCCATTCATGAGGAGCTGCACAGTCTTCTGAGCGAGCAGTGCACACTAGACACCGACTCTGGCACCGGCCTCAGTCTGCCCACCGTCATCAGCTCTGTTCCAGAGGACGTTGTGGAGGATATCAAAGtgcgAACGTGTTTTGTCAGTGACCTGCAGAGGGGCCTGAAGATCCAGGAGGCCAAATTTAACATGGACGGATCTGCTGAGAGACCGGCTCCTCCCCCGGATGTGGAATATCCACTGGATGGCCGGAAGATTCTCCATATCAAGGGATCGATCAGAGACTCGGTGGCCGAGATGTTGTTTGAGCAGGATAATGAAGAGAAGTCCATCGCCACGCTGCTGCTGGACACTCTGGTGAAGTGTCCCATCGACACCCGCAAGGTTCTGTCGGAGAACGTGGTGGTAATCGGCGGTACGGCCATGCTGCCCGGCTTCCTGCACCGCCTGCTGTCCGAGATCCGCTCGCTGGTGGAGAAACCCAAGTACTGCGACGCTCTGGCCACCAAGAGCTTCCGGATCCACAGCCCTCCCGCCAAACCCAACTGCACCGCCTGGTTAGGAGGTGCTATATTTGGAGCGTTGCAGGACATCTTGGGGAGTCGCTCGGTTTCCAGAGACTACTACAACCAGACGGGCCGTATCCCAGACTGGTGTTGTCTCAGCACCCCACTACCAGATTCGGTCTACGAGGCAGGAAAGACGCCTCCGCCTCTCATGAAGAGGGCCTTCTCCACAGAGAAATGaactgagatatatatatatatatatatatatatatatatatatagagatgtAACCTCGTCGACGTCTGCTTATTCAGATACGCTCTTGTATGTTTACAGCACAGACATGTCTCGAGTCCTGGTCTACGATGATTTAAAGTCTGTCATATTAATCAGCTATACTTAATTTGAACAGTAGGTGAAACCAAAACCACTATCACCATCGGCTCGTCTGCAATGAGagaaaaatcttttcaaatgcacattttatccAGCCTAAATCAGTCAGTACCTATGTAGATTAGATAGACCTTActctttttttgtgctatttGCACCATCAAAGACATGGAAGACAACTTGACTGTAGCCAAGAAATAACGTCATCTCAATTGCATTTAACAGTGAGTTTGAAGCGCTGAACATGTTGAGAAGTTTGCTGTATTTATTGGGtttgtgataaaataaacattccaaAAGTA

Function

symbol description
actr10 Acts upstream of or within central nervous system myelin formation and retrograde axonal transport of mitochondrion. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of dynactin complex. Is expressed in brain and posterior lateral line ganglion. Orthologous to human ACTR10 (actin related protein 10).

NR:

description
PREDICTED: actin-related protein 10

GO: NA

KEGG:

id description
K16576 ACTR10, ARP11; actin-related protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220325.1 True 1827 mRNA 0.50 13 26176901 26184090

Neighbor

gene id symbol gene type direction distance location
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding downstream 831 26168534 ~ 26176070 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding downstream 13850 26159166 ~ 26163051 (-)
LOC122325523 LOC107659807,LOC107567392,LOC107756058,LOC107659806,LOC107713860 coding downstream 24378 26149891 ~ 26152523 (-)
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding downstream 32482 26140448 ~ 26144419 (-)
LOC122324577 LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860 coding downstream 42108 26132560 ~ 26134793 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding upstream 13489 26197579 ~ 26211185 (-)
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding upstream 30573 26214663 ~ 26216463 (-)
fkbp3 fkbp3,LOC107717646 coding upstream 51329 26235419 ~ 26242824 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding upstream 101723 26285813 ~ 26287605 (-)
LOC122324888 NA coding upstream 103747 26287837 ~ 26288247 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 2022 26149891 ~ 26174879 (-)
G142247 NA non-coding downstream 99828 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 121336 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 143703 26017371 ~ 26033198 (-)
G142261 NA non-coding downstream 164653 26010650 ~ 26012248 (-)
G142282 NA non-coding upstream 5973 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 46216 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 83822 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 85547 26269637 ~ 26270044 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 127121 26311211 ~ 26311698 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 79930 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 122432 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 422893 25747667 ~ 25754008 (-)
G142058 NA other downstream 526808 25648492 ~ 25650093 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 799485 25326508 ~ 25377416 (-)
G142281 NA other upstream 1570 26185660 ~ 26187919 (-)
G142278 NA other upstream 47934 26232024 ~ 26234245 (-)
rps29 NA other upstream 299231 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 738725 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1045713 27229803 ~ 27257482 (-)

Expression


Co-expression Network