LOC122324577 (LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860)


Basic Information

Item Value
gene id LOC122324577
gene name LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26132560 ~ 26134793 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219108.1
TTTCCACATTGTGCTTAGTTGTTCAATCATGGCTCtaaatttgttgttgtttaggaTTTTAGCACTGTCTGCTCTTTGTCATGCGGTTCCTCAGTGGAGTAATCTACCCCAGAGTTCTCAAGCTGTGATGCCAGTACAACAACCACCCAGTCAGTGGGTTCAGCAGCTGATTCAACAACCACTCAGTCAGAAGGTTCAGCAGCCGGTTCAAcaacagccacccagccagAAGGTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAAcaacagccacccagccagAAGGTTCAGCAGCCGGTTCAAcaacagccacccagccagAAGGTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAACAACAGCCACCGAGCCAGTGGCTTCAGCAGCCGGTTCAACAACCTAACCAGCAGTTTCCCCTTCAGAAGCCAGTGGCACAGACAGAGCCCATTGATAAGTGTACTGTAGCTGATTATGATCAGATCCCATGTGGACAACCTGGGATCAGTGGTGCCGAGTGTACCGCTATCAACTGCTGCTTTGATGGACAGCAGTGCTTCTATGGAAGAGCAGTGACTGTCCAGTGTATTCGAGATGGTCAGTTTGTGGTAGTGGTGGCTAGAGATGTTACTGTGCCTCAACTGAGTCTGGATTCGGTTCGTCTACTGGGTGGAAGTGACCCGCCTTGTGCTCCTGTGGATTCCACACCTTCCTTTGCTATATACCAGTTCCCTGTGACTGCATGCGGCACGAGTATGATGGAGGACAGTGGATATGTGGTGTATGAGAACAGAATGACCTCCTCATACGAAGTTGGCGTTGGACCACTTGGATCCATCACGAGGGACAGTCACTTTGAGCTTCTCTTCCAGTGCAGATACTCTGGAACATCTGTGGAAGCTCTGGTTGTGGAGGTCAATTCtgttcctccacctccaccagtAGCTGCTCCTGGACCTCTCAGGGTAGAGCTCAGACTGGCCAATGGCCAGTGTGTCACCAAGGGCTGTGCTGAAGGGGATGAGGCCTACACGTCCTACTACAGTGACGCTGATTATCCCGTCACAAAAGTCCTGCGGGAGCCTGTGTATGTTGAAGTGCACATTATGGAAAGGACTGACCCCAACATTGTCCTGATGCTGGGACATTGCTGGGCGACCTCCACCTCCAGTCCACTCAGTCTGCCCCAGTGGGACCTTCTGATTGATGGATGCCCTTACCAGGATGACCGTTATCTGACCACATTGGTTCCAGTAACTGGATCATCTGGTGTGCAGTTCCCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAACCTCATTGGCTCCTCTGCAGGAAACGATCTTCATCCACTGCAGTACAGAGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCACCAGGAAAcGAAGAGACACCCGTGTCAAGGCCCTCGCTAGTCAGCAGACTGTGGTTTCTAGTGGAGAAGTTACTCTGGTCATGTGAATgtagtatttaataaattttggACCACAAA

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219108.1 True 1742 mRNA 0.52 8 26132560 26134793

Neighbor

gene id symbol gene type direction distance location
LOC122324578 LOC107659807,LOC107659806,LOC107756058 coding downstream 7112 26123353 ~ 26125448 (-)
LOC122324575 LOC107659807,LOC107756058,LOC107659806 coding downstream 18836 26111476 ~ 26113724 (-)
LOC122324579 LOC107756053,LOC107659807,LOC107756058,LOC107659806 coding downstream 29337 26101333 ~ 26103223 (-)
cipcb NA coding downstream 44590 26083089 ~ 26087970 (-)
znf410 LOC107659809,LOC107712212,LOC107550151 coding downstream 53014 26072405 ~ 26079546 (-)
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding upstream 5655 26140448 ~ 26144419 (-)
LOC122325523 LOC107659807,LOC107567392,LOC107756058,LOC107659806,LOC107713860 coding upstream 15098 26149891 ~ 26152523 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding upstream 24373 26159166 ~ 26163051 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding upstream 33741 26168534 ~ 26176070 (-)
actr10 actr10,LOC106608088 coding upstream 42108 26176901 ~ 26184090 (-)
G142247 NA non-coding downstream 55487 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 76995 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 99362 26017371 ~ 26033198 (-)
G142261 NA non-coding downstream 120312 26010650 ~ 26012248 (-)
G142260 NA non-coding downstream 122172 26006269 ~ 26010388 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding upstream 15098 26149891 ~ 26174879 (-)
G142282 NA non-coding upstream 55270 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 95513 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 133119 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 134844 26269637 ~ 26270044 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 35589 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 78091 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 378552 25747667 ~ 25754008 (-)
G142058 NA other downstream 482467 25648492 ~ 25650093 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 755144 25326508 ~ 25377416 (-)
G142281 NA other upstream 50867 26185660 ~ 26187919 (-)
G142278 NA other upstream 97231 26232024 ~ 26234245 (-)
rps29 NA other upstream 348528 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 788022 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1095010 27229803 ~ 27257482 (-)

Expression


Co-expression Network