LOC122324575 (LOC107659807,LOC107756058,LOC107659806)


Basic Information

Item Value
gene id LOC122324575
gene name LOC107659807,LOC107756058,LOC107659806
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26111476 ~ 26113724 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219107.1
ATCTCCACAGTGTGCTTAGCTGTTCAATCATGGCTGTAAGTTTGTTGTTGGCTGAGCTTTTAGCACTTTGTGCTCTCTGTTTTGCTGTTCCTCAGTGGAGTAATTTGCCCCAGAGTTCTCAAGCTCTGATGCTTCAAAATGCTAACCAGCAGGTtaagcagccggttcaacaACAGCCAGCCAGCCAGAAGGTTCAGCAGCCAGTTCAAcaacagccacccagccagtggcttcagcagccagttcaacagcagccacccagccagaaGGTTCAGCAGCCAGTGCAACcacagccacccagccagtgggttcaGCAGCCGGTTCAGcaacagccacccagccagtgggttcaGCAGCCGGTTCAGcaacagccacccagccagAAGGTTCAGCAGCCAGTGCAAcaacagccacccagccagtggcTTCAGCAGCCGGTTCAGcaacagccacccagccagtggcTTCAGCAGCCGGTTCAGcaacagccacccagccagtggcTTCAGCAGCCGGTTCAGcaacagccacccagccagtggcTTCAGCAGCCGGTTCAGcaacagccacccagccagtggcTTCAGCAGCCGGTTCAACAACAGCCACCTAACCAGCAGTTTCCACTTCAGAAGCCGGTGGCACAGACAGAGCCCATTGATAAGTGTACTGTAGCTGATTATGATCAGATCCCATGTGGACAACCTGGGATCAGTGGTGCTGAGTGTAACGCTATCAACTGCTGCTTTGATGGACAGCAGTGCTTCTATGGAAGAGCAGTGACTGTCCAGTGTATTCGAGATGGTCAGTTTGTGGTAGTGGTGGCTAGAGATGTTACTGTGCCTCAACTGAGTCTGGATTCGGTTCGTCTGCTGGGTGGAAGTGACCCACCTTGCGCTCCTGTGGATTCCACACCTTCCTTTGCTATATACCAGTTCCCTGTGACCGCATGCGGCACGAGTATGATGGATGACAGTGGATATGTGGTGTATGAGAACAGAATGACCTCCTCATACGAAGTTGGCGTTGGACCACTTGGATCCATCACGAGGGACAGTCACTTTGAGCTTCTCTTTCAGTGCAGATACTCTGGAACATCTGTGGAAGCTCTGGTTGTGGAGGTCAATTCtgttcctccacctccaccagtAGCTGCTCCTGGACCTCTCAGGGTGGAGCTCAGACTGGCCAATGGCCAGTGTGTCACCAAGGGCTGTGCTGAAGGGGATGAGGCCTACACGTCCTACTACAGTGACGCTGATTATCCCGTCACAAAAGTCCTGCGGGAGCCTGTGTATGTTGAAGTGCACATTATGGAGAGGACTGACCCCAACATTGTCCTGATGCTGGGACATTGCTGGGCGACCTCCACCTCCAGTCCACTCAGTCTGCCCCAGTGGGACCTTCTGATTGATGGATGCCCTTACCAGGATGACCGTTATCTGACCACGCTGGTTCCAGTAACTGGATCATCTGGTGTGCAGTTCCCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAACCTCACTGGCTCCACTGCAGGAAACGATCTTCATCCACTGCAGTACAGCGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCACCAGGAAACGAAGAGACACCCGTGTCGAGGCTCTCGCTAGTCAGCAGACTGTGGTTTCTAGTGGAGAAGTTACTGTGGTCATGTGAATGTAGTATTTAATAAACTTTGGACCACAAA

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG:

id description
K19926 ZP1; zona pellucida sperm-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219107.1 True 1746 mRNA 0.53 8 26111476 26113724

Neighbor

gene id symbol gene type direction distance location
LOC122324579 LOC107756053,LOC107659807,LOC107756058,LOC107659806 coding downstream 8253 26101333 ~ 26103223 (-)
cipcb NA coding downstream 23506 26083089 ~ 26087970 (-)
znf410 LOC107659809,LOC107712212,LOC107550151 coding downstream 31930 26072405 ~ 26079546 (-)
lrfn5b lrfn5b,LOC107659815,LOC107564320,LOC107712211,LOC108411613,LOC108257655 coding downstream 61709 26036394 ~ 26049767 (-)
magl NA coding downstream 134648 25963983 ~ 25976828 (-)
LOC122324578 LOC107659807,LOC107659806,LOC107756058 coding upstream 9629 26123353 ~ 26125448 (-)
LOC122324577 LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860 coding upstream 18836 26132560 ~ 26134793 (-)
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding upstream 26724 26140448 ~ 26144419 (-)
LOC122325523 LOC107659807,LOC107567392,LOC107756058,LOC107659806,LOC107713860 coding upstream 36167 26149891 ~ 26152523 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding upstream 45442 26159166 ~ 26163051 (-)
G142247 NA non-coding downstream 34403 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 55911 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 78278 26017371 ~ 26033198 (-)
G142261 NA non-coding downstream 99228 26010650 ~ 26012248 (-)
G142260 NA non-coding downstream 101088 26006269 ~ 26010388 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding upstream 36167 26149891 ~ 26174879 (-)
G142282 NA non-coding upstream 76339 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 116582 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 154188 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 155913 26269637 ~ 26270044 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 14505 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 57007 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 357468 25747667 ~ 25754008 (-)
G142058 NA other downstream 461383 25648492 ~ 25650093 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 734060 25326508 ~ 25377416 (-)
G142281 NA other upstream 71936 26185660 ~ 26187919 (-)
G142278 NA other upstream 118300 26232024 ~ 26234245 (-)
rps29 NA other upstream 369597 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 809091 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1116079 27229803 ~ 27257482 (-)

Expression


Co-expression Network