G150936


Basic Information

Item Value
gene id G150936
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8892564 ~ 8894757 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU223379
gcttaaaatgaaaataactttattttctgGCACTTCAGATAAATTCTACTCGTCCAAAATAAAGTCACAGACATAACGACCGcttgtttgttttgcaaatgTTAATAAATCAGCTTTATTTCAGGCTAAGACCTGTATCTAATGTATGAATGGAGCTAAATGGTTTCTTTggactttaaaaacattacaccgaCAGAAAAATGGCAGATATAAAGGTCTAACTACTCGAGTCATCTGAGTGGAAGCCGTTTTTTGTAGTTCACAGCCCAAAAGGAAAGAACTAGCAGAAGGGAGCAGACTGAGGCGTTGCATTTCTTTAAGGAAAAAGGGGAAGACAGGCATAGGAGATACAGGCAATCTTTTTAAAGGGACGTAGCGCTGAACAGTTCAGAACATACTGTCCACATGGCACGAAAATTCAAGAGGCATTGTATGATGGTGTGCTTACGAAATCCTAGTGGAAGAGACGGTCTGGACGAGGTCTAAAACCTGGAGAGCCCTGATAGTCTCTGAAGAGCCTGCTACACTTCCTCTAGGAGAGAGACTGACACAGGATATCCTCATATTGTGACACGCAGACACACGCGGTGTCAAACTGGCATGTGTGGGACATCTTCATAAAGACAAAAGCAATGCATAAAAGCCctaaaaacaggaaataaattacatatttacactgAAATGATAGACGTGTGCAATCGAATTACAAAtggaattacaaaaatgtttaaaaaaacaaaaaaacaaaacatttctgtgaacCTCAACACACTATAATAAACTGATAGAGCGCCACAGTTCTTCCAAGAATTGaaattgtcatcatttgtgTTGTTGCACACTCGCATGGCTTCGTTTCTACTGTGGAGCCTAAAAGGAGATATTCCCATACAATTAAAAGTGAATGGGGACTGGGCGAAAACAACGGCGCGTGCTATTTTTAAGACTTCAAGCAAAACGACAGCTCTGTGCAAATAACGTTTGGATTTCTGAGATGAATTTGAAGCGAAAGCGTACTCGCAAAATAATAGTTGTGCATGAATTGCCTGAAgtttaaagtaacaaaaaaaaactaactaaaaaaatattcctCACGCAGAAGTATCGTACAAATCTCAACAAGATGTGAAATCTGTCACACGACTCGCCATCCATGTAGTGTAATAATGTCATTTATGAATTTCTAAAATCAGTCTCCATCCATTTTTAAGGAAAAGAGCAGcggtcattttaaatgaaaaattgcaaACATTAATACCTTAGTGTGAAAAATTGCCcgaaatttcactttttttcgcGAACAtcaacttacatttttaatatgccCCGCTATTTTAAAACGCAAAGCAGCTTTTGCgatatttttatgcacattttcgCCATTTCTAAATCGCAAAAAACTCCGGTCCCCGTCCACCTTAACTGTATGGAACAGAGCAGCGCGAACATTCTACAAAACATCTCGTTTTtagctccacagaagaaagggTAAGAAagagaagtgttttttttcttttctggcGAACTATTTCTCGAAAAATTCACGAAGCTACCCTGCAACGTAAAGAACCTGATTGAAATGATCCTAATAAATCTAACACTAGCTATACAAAACATCCCAGTACAGTCTGATCTGCCCGTTCCAAGGCACATCTGTCATCCCTTATTATTATTCATCTACACACAGTTCATCTGCTCTCTTCGTCCGTAGGTTGTGTTAGATGTGTATGTGGACTGAAAGGATGTTAATGCGTCTGCTACTTTAAGTTTTCCTCCTGGTCTTGAGTTACCAGCACtcatttcatcaaaataacCTTCTCTAACATTGCCCCGTAATTCATCCGCTGGAGAGGCTACGTGTCCGTGACTAAAACAAAGACGATACGATAAAGTTCCCTTTCCGAGCATTTCTCATCGATTTCGATACAGCGACAGGGCGGAGTTGAAACGTTCGAGTGCAAATCAGGAAGCAAGGCGGCCGAAAAACGGCCGATGCAAAGAGTCTCTTAAGACGCGCGTAtggaatgtgtgtgtggatgaagTCTTTAGTTAGGAGAGGACGGACAGCGTGACGCTTCCCCTCTGCTTCTTCAGTATGGCCACGGCCTGCTCGTGTGTGACGCCCTCCAGACTCTCTCCGTTGACCGACAGCAGCTGATCGCCGCGTTTCAGACGGCCGTCCACCGCCGCCGCC

Function

GO:

id name namespace
GO:0032838 plasma membrane bounded cell projection cytoplasm cellular_component
GO:0042995 cell projection cellular_component
GO:0120025 plasma membrane bounded cell projection cellular_component
GO:0005929 cilium cellular_component
GO:0005930 axoneme cellular_component
GO:0097014 ciliary plasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223379 True 2194 lncRNA 0.41 1 8892564 8894757

Neighbor

gene id symbol gene type direction distance location
tal1 tal1,LOC107669848 coding upstream 6136 8880269 ~ 8886428 (+)
ier5 ier5,LOC107731541 coding upstream 32495 8858464 ~ 8860069 (+)
si:dkey-121a11.3 si:dkey-121a11.3,LOC107669817,LOC107731537,LOC107715110,LOC107653549 coding upstream 45508 8828910 ~ 8847056 (+)
LOC122327627 LOC107653644,LOC107715111,LOC107588053,LOC100711005,LOC102215641,LOC101481666 coding upstream 72970 8813432 ~ 8819594 (+)
ankrd29 ankrd29,LOC107669827,LOC107653646,LOC107731532,LOC107715109 coding upstream 79698 8807166 ~ 8812866 (+)
tm2d1 tm2d1,LOC107715116,LOC107653653,LOC107669801,LOC106574044 coding downstream 101214 8995971 ~ 9004905 (+)
frem1b frem1b,LOC107669836,LOC107599441,LOC107592728,LOC107728586,LOC107715059,LOC107653550 coding downstream 303267 9198024 ~ 9223536 (+)
atpaf1 atpaf1,LOC107653579,LOC107715059 coding downstream 329053 9223810 ~ 9227301 (+)
rab3b rab3b,LOC107592692,LOC107653655,LOC107669838,LOC108429523,LOC103027359,LOC108270584,LOC105904424 coding downstream 333651 9228408 ~ 9235230 (+)
nrd1b nrd1b,LOC107669832,LOC107592727,LOC107728531 coding downstream 341342 9236099 ~ 9248034 (+)
G150928 stx6,LOC107715114,LOC107669815,LOC107653648,LOC107731540 non-coding upstream 37313 8854822 ~ 8855251 (+)
G150916 NA non-coding upstream 97278 8794161 ~ 8795286 (+)
G150886 NA non-coding upstream 118929 8772636 ~ 8773635 (+)
G150860 NA non-coding upstream 325251 8566961 ~ 8567313 (+)
G150858 NA non-coding upstream 331391 8560402 ~ 8561173 (+)
G150937 NA non-coding downstream 3463 8898220 ~ 8898434 (+)
G150938 NA non-coding downstream 4289 8899046 ~ 8899466 (+)
G150939 NA non-coding downstream 4819 8899576 ~ 8900972 (+)
G150941 patj,inadl,LOC107715056,LOC107731530,LOC107669802 non-coding downstream 8317 8903074 ~ 8905934 (+)
G150942 NA non-coding downstream 12640 8907397 ~ 8908479 (+)
pdzk1ip1 NA other upstream 365 8890622 ~ 8892199 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other upstream 274959 8614289 ~ 8617605 (+)
G150756 NA other upstream 724292 8167449 ~ 8168272 (+)
G150369 NA other upstream 2183673 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 2382108 6502914 ~ 6510456 (+)
G150940 NA other downstream 6386 8901143 ~ 8902311 (+)
G150945 NA other downstream 24522 8919279 ~ 8919780 (+)
G150946 NA other downstream 26941 8921698 ~ 8921967 (+)
G150965 NA other downstream 93429 8988186 ~ 8988691 (+)
march2 march2,LOC107728591,LOC107669840,LOC107655247,LOC107592682,LOC107599445 other downstream 560081 9454838 ~ 9530165 (+)

Expression


Co-expression Network