G150886


Basic Information

Item Value
gene id G150886
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8772636 ~ 8773635 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU223312
GGATCATCATAAATGGGGGTCCCTGacatcaaatgttaaaaaaagaaaaACTGAACTCACGTACAAAGTTTAATGGCAAGTTtcgttattttattattgaaatgtcCTAATTCTATTGTCCTCACAAGGTATAAATACCCTGAACATCCAATATTGACACGTTTCACAGTGAAGACATGTGTTGAGCCTCTGGAGTTACTGACAGAGAGAGCAGTAGTGAATAAATGTTACAGCTACGGGCCGAGAAAATAAGGAGGTGCAAGTTTCACAacaatttcacaatatatacaCCAACTTAAATCAATTCAAGTCATTCAGAGGCGACATTATCAAAAGGAGATACTGATGCGCTGTTAAAAGTCTACAAATGATAAGCCTGggccaaaaatattattacgtaacatctggagaaaaaaaacaaaaaaacgaaacaataCAACATACGGCTCATCAAAAACAAGGTCCAAAATGAAATGGCCTCCTCCGGCCAGGAGAAAGACCAGTAGGTAGTTGTGTATGGATTTCACTGCAGGAAATATCTGGTGACCAGCAGAGGACATGACAACCAAAGCTCTGCTGCTGTTCTCCAACTTAATACACAGAAGAACcgatgaaatatgttttatatccCCTGACGTATTACAAAGGGAACACGTGGTTTAGTGTTAAAATAGAACTTTGtaatacatacaataaaaacagccaaCCTCGAATGCAGTGCGTTTTAACTAGACTAGTGACAGACCGATACATCAGACTGATATCTGATCAATTTGGcttgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223312 True 783 lncRNA 0.38 2 8772636 8773635

Neighbor

gene id symbol gene type direction distance location
osbpl1a LOC107592705,LOC107757490,LOC107653641,LOC107715107 coding upstream 417 8755638 ~ 8772219 (+)
lrrc39 lrrc39,LOC107592708,LOC107715106,LOC107653639,LOC107588057 coding upstream 19770 8749524 ~ 8752866 (+)
dbt dbt,LOC107715105,LOC107669841,LOC107592709,LOC107588055,LOC107653638 coding upstream 25226 8740404 ~ 8747410 (+)
dph5 dph5,LOC107715097,LOC107669825 coding upstream 122167 8641672 ~ 8650469 (+)
serpinc1 LOC107592718,LOC107669814,LOC107715095,LOC107588063,LOC107757486,LOC107653628 coding upstream 167862 8599832 ~ 8604774 (+)
ankrd29 ankrd29,LOC107669827,LOC107653646,LOC107731532,LOC107715109 coding downstream 33531 8807166 ~ 8812866 (+)
LOC122327627 LOC107653644,LOC107715111,LOC107588053,LOC100711005,LOC102215641,LOC101481666 coding downstream 39797 8813432 ~ 8819594 (+)
si:dkey-121a11.3 si:dkey-121a11.3,LOC107669817,LOC107731537,LOC107715110,LOC107653549 coding downstream 55275 8828910 ~ 8847056 (+)
ier5 ier5,LOC107731541 coding downstream 84829 8858464 ~ 8860069 (+)
tal1 tal1,LOC107669848 coding downstream 106634 8880269 ~ 8886428 (+)
G150860 NA non-coding upstream 205323 8566961 ~ 8567313 (+)
G150858 NA non-coding upstream 211463 8560402 ~ 8561173 (+)
G150850 NA non-coding upstream 305006 8466155 ~ 8467630 (+)
G150847 LOC107757454,LOC107588074,LOC107653622,LOC107715088,LOC107561899,LOC107665497 non-coding upstream 307611 8464639 ~ 8465025 (+)
G150846 NA non-coding upstream 313742 8458588 ~ 8458894 (+)
G150916 NA non-coding downstream 20526 8794161 ~ 8795286 (+)
G150928 stx6,LOC107715114,LOC107669815,LOC107653648,LOC107731540 non-coding downstream 81187 8854822 ~ 8855251 (+)
G150936 NA non-coding downstream 118929 8892564 ~ 8894757 (+)
G150937 NA non-coding downstream 124585 8898220 ~ 8898434 (+)
G150938 NA non-coding downstream 125411 8899046 ~ 8899466 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other upstream 155031 8614289 ~ 8617605 (+)
G150756 NA other upstream 604364 8167449 ~ 8168272 (+)
G150369 NA other upstream 2063745 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 2262180 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 2533279 6236117 ~ 6239357 (+)
pdzk1ip1 NA other downstream 116987 8890622 ~ 8892199 (+)
G150940 NA other downstream 127508 8901143 ~ 8902311 (+)
G150945 NA other downstream 145644 8919279 ~ 8919780 (+)
G150946 NA other downstream 148063 8921698 ~ 8921967 (+)
G150965 NA other downstream 214551 8988186 ~ 8988691 (+)

Expression


Co-expression Network