G151210 (LOC107669820,LOC107592722,LOC107655244,LOC107599472)


Basic Information

Item Value
gene id G151210
gene name LOC107669820,LOC107592722,LOC107655244,LOC107599472
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 9514740 ~ 9515568 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU223789
CTAGCGCAAGCTTCTTCTCAACGTAGCCGATCAGATCCTTCATGTATTTGGAGATGGTTTTAGCGTACGTCAGAGCAGAGTCAACACCTCCTTCACTGCGCTGCAGGATAATGTCTACCTCTTCAGCGCTCATCGCaagctcagatGAATCGCTCCGTGTGTGTGAAGACTCGTGTCCCGAGAGGTTCTCCATCGACTGAACATTCAAAGAGAATAAACATCTTAGATTTATAAAA

Function

NR:

description
PREDICTED: minor histocompatibility protein HA-1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223789 True 236 lncRNA 0.46 2 9514740 9515568

Neighbor

gene id symbol gene type direction distance location
polr2eb polr2e,polr2eb,LOC107669821,LOC107599482 coding upstream 8449 9503550 ~ 9506291 (+)
hnrnpm hnrnpm,LOC107599446,LOC107728570,LOC107592680 coding upstream 42238 9465508 ~ 9472502 (+)
rab11ba rab11b,LOC107599444,LOC107592688,LOC107655249,LOC108429533,LOC102310619 coding upstream 60393 9449289 ~ 9454347 (+)
rabgap1l rabgap1l,LOC107728556,LOC107715121,LOC106613570,LOC107592725,LOC106574055,LOC107655181,LOC107669795 coding upstream 154425 9283786 ~ 9360315 (+)
gpr52 gpr52,LOC107599442,LOC107715120,LOC107655251,LOC107592687,LOC107728559,LOC107669811 coding upstream 197733 9309806 ~ 9317007 (+)
tm6sf2b tm6sf2,LOC107599483,LOC107719666 coding downstream 86882 9602450 ~ 9612501 (+)
hapln4 hapln4,LOC107728536,LOC107599484,LOC107719665,LOC107687742,LOC107554801 coding downstream 98311 9613879 ~ 9619115 (+)
LOC122327676 nr2c2ap,LOC107687739,LOC107728548,LOC107554809,LOC107719618,LOC107599487 coding downstream 368944 9884512 ~ 9886217 (+)
yjefn3 yjefn3,LOC107687717,LOC107655232,LOC107719609,LOC108429551,LOC107554805,LOC103041169,LOC108271278 coding downstream 480911 9996479 ~ 10028474 (+)
cilp2 cilp2,LOC107728576,LOC107687716,LOC107655229,LOC107719612,LOC107599460 coding downstream 515302 10030870 ~ 10044212 (+)
G151194 NA non-coding upstream 39709 9472986 ~ 9475031 (+)
G151178 NA non-coding upstream 149418 9360428 ~ 9365322 (+)
G151163 NA non-coding upstream 231736 9277690 ~ 9283004 (+)
G150983 NA non-coding upstream 367352 9145211 ~ 9147388 (+)
LOC122327612 NA non-coding upstream 443568 9068732 ~ 9071172 (+)
G151294 NA non-coding downstream 84988 9600556 ~ 9667133 (+)
G151308 NA non-coding downstream 246586 9762154 ~ 9762419 (+)
G151333 NA non-coding downstream 379478 9895046 ~ 9895327 (+)
G151334 NA non-coding downstream 381013 9896581 ~ 9896839 (+)
G151337 cirbpb,cirbp,LOC108271114 non-coding downstream 538350 10053918 ~ 10080145 (+)
G150965 NA other upstream 526049 8988186 ~ 8988691 (+)
G150946 NA other upstream 592773 8921698 ~ 8921967 (+)
G150945 NA other upstream 594960 8919279 ~ 8919780 (+)
G150940 NA other upstream 612429 8901143 ~ 8902311 (+)
pdzk1ip1 NA other upstream 622541 8890622 ~ 8892199 (+)
G151232 NA other downstream 62111 9577679 ~ 9580151 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other downstream 372595 9888163 ~ 9893507 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other downstream 379873 9895441 ~ 9910793 (+)
LOC122328159 NA other downstream 407979 9923547 ~ 9963634 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other downstream 455054 9970622 ~ 9993441 (+)

Expression


Co-expression Network