cilp2 (cilp2,LOC107728576,LOC107687716,LOC107655229,LOC107719612,LOC107599460)


Basic Information

Item Value
gene id cilp2
gene name cilp2,LOC107728576,LOC107687716,LOC107655229,LOC107719612,LOC107599460
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10030870 ~ 10044212 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223410.1
ACTATCAGACTTGATTTTGAAGGACGGGGGAAAGAAATTAATTGGTCCAGCTGTGCAAAAACttgacaaactttttttttggtgtgtgtctttaatttatttagtgttaCCAACCCATCAGTGGCTGCGGCACTATGTGGGACTTCACAGTCGTGACGTTGGTGCTGTCTGCCGTCTTTGTTGTGTCTCTGGCACAAGGACCCATCTGGGACAACTCACATCTTCGGAGGTTAAACAAAACAGACAGGAACAGAAAGCTGGCTTACAACAGCCTTGTGGAGCCACAGACCACAGGTGTAACCGAGTGGACATCCTGGTTCAATATCGACCATCCGGGAGGAAACGGTGACTATGAGAGGTTAGAAGCCATACGCTTCTACTACAGAGAAAGGGTCTGCTCACGACCTGTAGCCATGGAGGCCCGTACCACGGACTGGGTTGCAGCTGCGGATACGGGGGAGGTTGTCCATTCCAGTCTGGAGAAAGGCTTCTGGTGTATCAATAAGGAGCAGCCATTTGGTCGCAGCTGTTCCAACTACCATGTGCGATTCCAGTGTCCACCAGTCCACTCGTACTGGACCGACTGGAGTGAATGGACGCCTTGCTCTGCCACCGCCTGTAATGATGTTGGCATCCAAGTCCGTCAGAGGAAATGCATGAGCACACAACCTCTTCCACTGCTTCTTTCACCTGTCTGCGTGGGACCTCACATTGAACGCAGAGAGTGTTCAACTCCTCCATGTCAAGCTTTGTGGAGCCAGTGGGGTTTATGGAGTACTTGCTCAGTGACCTGTGGAAAGGGCCGTAGAACAAGACGTAGGACATGTCACAGATCTTCTACTAAGATTCAGTGTACAGGACGACCTGTGGAGGTCCAAAAGTGTGGAAATCCATGTCCAGtggcATGCAAACGTGTCTGTCCTGGGGGACGTCCCAGCAAGGACTGTAGCTACTGTATCTGTGATGGGCCAACGCTGCACGGGGAGGTCTTTAGTGTTACAGGTGTTCCTGTGCCAAATGCCACAGTGGCTCTGGCTAGCCAAGCCAAGGTTGTCCGTGCCCACACTGATGCCAAGGGTCATTTCAAGATTGATGGACTGTGCACCAGTCCACAGACCCGAGTGGTCATAAGAAAGGATAAATTTTCACCTGTTACTCTTCCTGTTTTCAACAACAGTACTGATGAATTCTGGGTACGGGCCATCTTACAATCCTcagAAAAGCCCTATATTGAAAAGCACCCAGAAGACAAGGTGCGTTACGAGGGACAACGTGCAACCCTTTGCTGTAGAGCGACAGGATCACCAAAACCTGACAAATATTACTgGTACCACAATGGAACCTTACTGAATCGCACAATATACAAGTATGATGAAGATTTGATATTGCGGGACCTGAAACCAGAGCACTCAGGCAAATATCACTGCAAAGCAACTAGTCTGACAGGCAGCATAAAGTCTACTTCAGCCGTCCTCACTGTTTTCGctAAAGGAACACCAGCATGCAACTCAACACCTGAAACTCACCTGATTAAATTGCCATTAGACTGCAAGCAGCATGGAACAGACTCCAAGTTTTACAATGCAGGTCGTTGTCTACATAACAAATGCCCTGGATCGCTGGACTTTGACATGCGTTGCAGGGATGGATCTGGCTTCTGCTGTGGGGTCAAACAAATGGAAGCTAGAGAGATCAACTGTGGCCGTTACACACTGCCTATCAAGGTTGTTAGTGAGTGTGGCTGCCAGAATTGTGTGGAGCCCAAAATTCTTGTACGGGGCAGGGTGGTGTCAGCAGACAGTGATGAACCCCTGCGCTTTGGACATATTTACATAGGGAAAGAACGGATAGGTACCACAGGATATCAGGGTGGGTTTACAATCCAGGTATCTCCAGATACACAACGTCTTGTGGTAAACTTTGTGGATCCATCTGAGAAGTTCATTGACACAGTCAAGGTTTTTATCTTTGACAAGAGAGGAGGTTCTGTCTATCATGATGTAAAAGTGATGAGGAAGCAGGAACCTGTTGATATAAATGCTGCAGAAAGCAATACCATTTACCTGGGTGAAATCAAAGATGAGGACCCCATCGGTCAACTGGTCATACCTCCAAACTCTTTCCATAAAAACACAGGGGAAGTGTACGAAGGGACTGTTAAGGCCAGTGTCACGTTCCTTGACCCACGCAACATTACAAtggctgctgctgctcctgGCGATCTCAACTTTGTAGACAATGAAGGAGACATGCTACCTCTCAGGACATATGGAATGTTTTCAGTAGATTTCCGAGATGGAGCAAACCAGGAGGTTCTAGGAGCTGGCGCAGTCCAGGTACTTCTTGATACAGAGCATGTAAAAATGCAGGAGCACATCCCTGCTATGAAACTCTGGTCCCTCAATCCTGATACAGGTATTTGGGAGGAGGAGAGTAACTTTCAACCCACACAAACTACTGTTGCTGGCAAAGGAAGGAACAAACGTGAGGAGCGCACCTTCCTGATAGGGAATATGGAAATCAGGGAGCGTAGGTTGTTCAATCTCGATGTACCTGAGAATCGCCGGTGCTATGTCAAAGTGAGGGCGTACATGAGCGACAAGTTCCTTCCCAACGAGCAACTAGAGGGAGTGGTAATAAACTTGATAAACCTGGAGCCTAAGCCTGGCTACTCATCAAATCCAAGGGCTTGGGGACGCTTTGATAGTGTGATAACAGGACCAAACGGTGCTTGTCTTCCAGCTTTCTGTGATGCTCAGAGGCCTGATGCATACATGGCTTACGTCACAGCTATTATGGGAGGTGAGGAACTGGAAGCAGCCCCCTCAATGCCAAAGATGAACCCAAATATTATTGGTGTGTCTCAGCCGTACTTAGGGAAGTTAGATTACCAGCGCTCCGATCATGAGGATCCAGCACTTAAGAAAACAGCCTTCCGAATCAACCTAGCCAAACCAAACCCTAACAATTTTGATGAAACGAATGGACCAATCTATCCTTATCAGAGTTTAATTGCCTGTGAAAATGCACCTGTTGATGCCAACCACTTTCGCTTCTTCCGTGTCGAAAAagataaatatgaatacaatgtGGTACCTTTTGAGGAGAGTGACCTTACATCTTGGACAGGAGATTATCTTTCATGGTGGCCAAATCCACAAGAGTTCAGGGCTTGCTACATCAAAGTTAAGATTCATGGAGCTACAGAAATCATGGTAAGGTCAAGAAACCTGGGTGGCACTCATCCTCAGACAAGAGGTCAGTTGTATGGCATTAGAGACATTCGTAGTACCCGTGATTTGCACCATCCTAACACCTCTGCTGCTTGTCTTGAGTTCAAGTGCAGTGGGATGCTCTTTGACCAAGGTATTGTAGACAGGTCACTAATTTCTATTATCCCACAAGGTAACTGCCGTCGTGTAGGTATTAATGGTCTTCTGCAAGAGTACCTGATAAAGCATCCTCCTGTTCTTCAAAACAATGAGTCTCATGCATTCAATATGTTAGCTCCTGTTGATCCACTTGGACACAATTATGGAATATACACTGTCACCGACCAGAACCCACGGGTTGCCAAAGAGATTGCCATTGGCCGTTGCTTTGATGGAACTTCAGATGGTTTTTCCAGGGAGATGAAGTCAGATTCTGGAGTGGCACTGACGTTCAGCTGCCCTAAAAGGACTGTGAATCGTGAGAGCTTATTTCAGCGCCTGCAAACAAATCCTGGCCTAACACTAACACAGATGGCGCGGGAGATGAGGGAGTCCCAGGGACTGCAAGTCAGAAGAGGGTCAACCCAAATGGTGGCCTACCCTTTTGGCCAACAGGGCAGGAGCCAGAACCGCAGAGCCACAAACACTAACAGAAGAAGACCAGCTACAAGGACACAACCAAGACAGTAGATCTTTCTTTAGGTCTTTTGGGTTGAAGAGAGTGAAGAAAAAGAGACTCAAAAAACCTGCTATGGAAATCCCAAACTTGGCCAGCCGGGTGATATTGGATGCTCTGTCCTAACGGAGCAAAATCCTCACCTGATTTATCCGAACACATTTAAACTCTTTCTACTTGTGTATGGAAAACTGTCCTCTCATACTTCCTCAAAGTTTACTTCATTgtttaagacatttatttttagtgattagGCCCATACAGActgatgtcatttatttatttccaaagTCAAAACTTGCTTATGTGGAGCGTCCTACTTTTAGATCCGTAATTATTCGCTTATTTTTCTAATTGATCAGGGTCTTCCATTGGCGATAGGCTAAATAGGTAAGACAATTCTGTATAGATTGAGGTCAAGTGTGACAGCTGCTAAACCACATATTCTACTCTATTGGATGCAATGATCAAGAATTGAGGCAGCAAAGATGCCAGTTTTGTTTCGCCTCCTTTTCCACGTCGCCATTCAAGTTATGATTTGGCCAACTATTGGTCTGACCAAAGCATGACTGACCCCTGCCAAGAATAGCATCCCTTAACAGAATAGATCGCCAAGGTAGACTAAACAAACCTGTGGTGAGACAAAGAATAATATAATGGCCCtaacttcaaaaacaaattaatgtttaattttttatttaatgccctCTTCATACTTTTGACCATATGGCTGGCCTAATCAAAATTTCTTTTGATATGAAATCCAACTAATACAGTATCTCAGTGTATGATGTCTAGATCTTAGAGTTAACtgattgtattttgtttcttgtttctgtttgtttcataAGTGCAATATTATGTTCCAGTAATGACTTGAGAGTCCTGACAAAAACATCCTATGTTATGAGCCAATCAACCATAGGTCTGTTAAAATGTTGGGCTATTCCCTTAGTAATTGCATATCTGAATTTCAAATTAcacctgttcttttttttaattaatcctaataaattagattttactaATCCAATTCAACCTCCTCTCATATAGCCAGCTGACAATGCAACATGAATGCAGTTGCAGTATTTAACTCCACCCTAAAGTAACAAAAATTCAATtgtgtgatttaaaaacaatcaatgcaccattaaaaaaataaaccatgtgGACCCGCATAAGCTGGACATTTATATCCTTTGAGGTATATTTTGTAGGTAGCATtgcaaatagaaaaaagtaTTTGCCTAATCCCTTATGCTCACAATATTCTGCATTGGCTCAAAgcaaaaagttaattaaattgAGTGCATGCTTTTATAGATATGGTTGCAAAAGTTTGTTTTGGCTTTTATTCAAAGGTGTACAGCTGGACCAATGCAGgtgaaatatatacaaaacttaatattttaaaatcaaatcatcaaatttaaataatattctaaaatcaAATCATCAAATTTTTActcagtttaaaaaacaaattatcaactgaataaagtctttaaagtctttaaaaaaatccagtaaagtaatattattgtacattttttctaaaattgcAGTTGAAGACAAAGTTGCAGAGTCTTATAACAGACTATTTGTAATCATTATAatctgagatttaaaaaaaaaaattgctatatttaaaaaaaaaatgtcaaaatgtgacatttacagGACAATTTTTACAGTCATGGCCGAccagaaaaatatgtaatcataaggaaatataatgtaatgaaacacattttgtaaactgtaaaacgCATCGCTTCAGGCCAAGTGCAAACGTAAAATTACTGAACACCATTATTTTCTATCCCAGACAATTTCATCTGTATGTGATGTTGAGTAGTACATATGTAACTTGAATAAATTTAAACTTctgtaattttgtaatatatcCAATTAAAGTAATCTTTGGtcttttagcatttatatactgtacatttttgtttcagaggATAGATGTAGTGGGATATTGGATGAATATggtgctaaaaaaaattgttggcttttaaaagtgtttgtcCTCGCTTCAACTGTCTGGCTGGTCTCAGGGAGACTACAACTTTTCCAGGAATAACCTCTGGCAAAATGTGCATTGATACCTCTACCACTACACTACAAAGTGAGAGTTGAATAATTGTCTTTGCACTCTCAGAAATCTCTTTTCATGCTTGCTTAGCAAACATTTTACATACAACACATCTTAAAAATCATATTGTAACTTATACTGCATGAAATTTCCCGTCTTGCGATCTCAAAAGCCAGTTTTATGTGTAAATTGTGGATTACAATGTCTGTCAAATTTACCAGAATGTAAATAAAGATCTCTTGTAAACA

Function

symbol description
cilp2 Predicted to be located in extracellular region. Orthologous to human CILP2 (cartilage intermediate layer protein 2).

NR:

description
cartilage intermediate layer protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223410.1 True 6237 mRNA 0.42 11 10030870 10044212

Neighbor

gene id symbol gene type direction distance location
yjefn3 yjefn3,LOC107687717,LOC107655232,LOC107719609,LOC108429551,LOC107554805,LOC103041169,LOC108271278 coding upstream 2396 9996479 ~ 10028474 (+)
LOC122327676 nr2c2ap,LOC107687739,LOC107728548,LOC107554809,LOC107719618,LOC107599487 coding upstream 144653 9884512 ~ 9886217 (+)
hapln4 hapln4,LOC107728536,LOC107599484,LOC107719665,LOC107687742,LOC107554801 coding upstream 411755 9613879 ~ 9619115 (+)
tm6sf2b tm6sf2,LOC107599483,LOC107719666 coding upstream 418369 9602450 ~ 9612501 (+)
polr2eb polr2e,polr2eb,LOC107669821,LOC107599482 coding upstream 524579 9503550 ~ 9506291 (+)
si:ch211-212d10.1 NA coding downstream 26604 10070816 ~ 10072852 (+)
cbarpb LOC107655224,LOC107554820,LOC107719602,LOC107728578,LOC107687734 coding downstream 145002 10189214 ~ 10208785 (+)
fstl3 fstl3,LOC107687713,LOC107728592,LOC107569933,LOC107655223,LOC107554822,LOC107719601 coding downstream 179378 10223590 ~ 10231309 (+)
bsg bsg,LOC107728565,LOC107719600,LOC107569932 coding downstream 194865 10239077 ~ 10249861 (+)
hcn2b hcn2b,LOC107569045,LOC107569931,LOC107719599,LOC107655221,LOC108429559 coding downstream 206655 10250867 ~ 10279453 (+)
G151334 NA non-coding upstream 134031 9896581 ~ 9896839 (+)
G151333 NA non-coding upstream 135543 9895046 ~ 9895327 (+)
G151308 NA non-coding upstream 268451 9762154 ~ 9762419 (+)
G151294 NA non-coding upstream 363737 9600556 ~ 9667133 (+)
G151210 LOC107669820,LOC107592722,LOC107655244,LOC107599472 non-coding upstream 515302 9514740 ~ 9515568 (+)
G151337 cirbpb,cirbp,LOC108271114 non-coding downstream 9706 10053918 ~ 10080145 (+)
G151358 NA non-coding downstream 37570 10081782 ~ 10082620 (+)
LOC122327864 NA non-coding downstream 93088 10137300 ~ 10140154 (+)
G151345 LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463 non-coding downstream 107268 10151480 ~ 10162446 (+)
G151373 NA non-coding downstream 141423 10185635 ~ 10187583 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 37429 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 67236 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 120077 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 137363 9888163 ~ 9893507 (+)
G151232 NA other upstream 450719 9577679 ~ 9580151 (+)
G151620 NA other downstream 761840 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 830216 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 873877 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 890823 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 1273895 11318107 ~ 11328230 (+)

Expression


Co-expression Network