G151345 (LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463)


Basic Information

Item Value
gene id G151345
gene name LOC107655225,LOC107554818,LOC107728568,LOC107687715,LOC107599463
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10151480 ~ 10162446 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU223986
ttattacctaaaaaaagaaaatgtcctATCACAAGTCACACTGAAATGTATtgcttaagaaaaaaatatatttagatattttcctttttttaacttgattatttccattatattccacaaaaacaaaacagggcaCAGCAACGCCCTTTTCCACCTTTCCGcccactttaaaaaaagcacaaagaaaTACATAATTCACAGTTACCATTTTGGTTTCATAAATTAATACAGTCACACATGTGCTACACCGGTCTATAGCTAGAACattgtaaattgtttttttttttctcaactctTGTAATCAGTTTTCATTGGCTACAAGAAAGAACAGGCAACTTAAATGATGTGATCAGAACTCCAACAAACTATTGAAAATGCCCCCCGTTCCCTCCCTCCACCCTCATTCAATTACCCTATCCTAAAACTCAGATCATCTCCTatgctttttttcaattttcactttttttttttttttactgttttacatATAGGTGAGGCACACACAGAgtatatttcatacatatataaaaattaaataatgattttcttGGGGGAGAGGGAGAAATCGTCCATTGAAGTCATTTATCTAAGAAGGGAAGTGCATGTTGTCAACGTGTCCTTAAAGGACATCTCAATTGAGAGTTAGGGCACTTTGTTGCTATAGCACTGCAGTTgaaacttcctttttttttttttttttttttcaattaaatttgtaaatttgtTGCTTCTTTGTAGGACAGCAGGGTTCAAGGGACGTAATCAAACAAACAACGGAACACACTGATGGAACCTGTTTGAACTCCAGGTCGTGACTTGTAACAATCAAACcataaaacagacaatattcTACCAGAGCTCCTAGAAATTGATAAAAACCTGCATAAATGCGAATAATTtgttcagatatttttttttttcgtacacACCGAAGGGGCAAAACTTTAAGGCACTGAAGCCTTGACATAATAGAGCCTCCACCTCCTAAACACAAAAATTGCCCCCGAAAAATTGATGctttaacaaaaacacaggacaaaaacaacaaaaacatcccTATGTTGTCCACCACTCTGCAAGTGTTTCGATAATGAACGTTAAGGCCActtgaacagaaaaaaaaggaaaagacaaTGTTCCCCTTCAGGTAGGTAATCTCATTGCAAACTCAGTGAGTGCAACATCGATGTGGTTCAGGACATTTTGACGTTTATTTCCAAGTAGTCATTAGGGGCGAACGTCGGTTTCTAACATCCCTGTTAGCCCGCATCTGGACAAGGTCGATGGGAGTGTTGGGGTTTGCTCTGAGGATCCCTTGAATGTTCCATTGTTCCTTAGTTAGTCCAGGAATGATCCATGTACAGTAGACTTCCAGTCCCGTTTTGGTTTGCGACTGATATGTAACATCACATTCCTAATCGAAAATCCCAAGTAGCTggagcaaatgtttttttgttttttttttcacaaattcatGCTTGTATATCTTTTCAGCACCACTTTCtcagtattgttattattaatattattttctataaaaatgatcaGGATAATTCACACTTTTGCATGCAAAGAGAAGTCCCGTATAGCAGCAGAACCGTCTGTCTGTGGAACGCCTGATAGAATATGTCAGTTCGTCTACGTATGAGGCACTATCAAGAGTGTGAAGGCGGGGGGCGGGGGGCGAATACGCTCCGGTCTGGATGTTTACGTGGGAATCTGCAAAGAGGTCCGGACAAACGGATGGGTAAATATGGGTAGCCTTGTTAAAACCGTATCACAACTGTAAGTGTTTGCTGGGATAAAACCCTCGAATGGTGGTTTTTGTagtcaaatgcataaatgagaGATTCCACTTTGGCAGAGCAAGCCATTATAATGCACAATTGTAAACTATTCCTCTGGCACCCCACCACTCTCTCTATTATACACATTTAGACAGTAACAGGAGAGATacagtgtgtatttaaatgattatataacATCAGATTCATTTCACAGCTTGACTCGAGCCTTGCTGAGCAACTGCTGTTTTACGtttggttggtttgtttgtttttcgcggaggtaaaaaaaaaaccaaaaaacaaaaaaaaagtcactttatatattctaaaaataaccGACTTCACAAACCTTGTGTCTTCCATCACATCAGCATATTTTCCTTTTGTGTCATGTTTTACTTTCCTACTTGAACCTCTGACTCTACACTGAGCTGTTGttgagaaagcattttttgtatttttatttttatatatttatatactaaacATGCACTGTGCCATCTCTTGGTTATGTTATGATATTGTCTATTTCAAATCACAGGTGTGTGTGCAAATGACCCTCCTCGTCTACGAGATAAAAAACCTGAATGCTTTGTGGGTAATGCtacatattttgtttcataaatcATCATGATTCAAGAAAAACAGGACTTAAAACCAAAGAAGGTAACCCCCTTCAAAACGATTCTTGAACTGTGAATGCCcatttgtaatgaaaaaaaaaggaggaagtAGGATCAGTATCTGATTTTGTTAGTTCATCGTGCCTGTATTTGGCCTGTATGGATCTTTCCCCTggggtaaaaagaaaaacaaaaaaaggaaagagaaaaacaaatccCAACACCGATGACGTCTGCTATGCTCATTTGTGTTGACTTCTTGGACGTTCTGAGTCCAAATTCTGGCTATTCATCAGTCCAATCCATATCCAAACATCGTCATTTGAAAATTTAGTCTATTCCAAGATCATAGTCTATCAAGGACGCAAGGTAAGTAAAAGTCTGTGAATCTTCCTTTGTGTAAAGTCTTTGTGGTCACAGGATAGACGAGGAGTGAAGCCTACGAGATTCTGCCTTCGGACACAGTCTTCGGGAAATTCTCCTCTCTAAAATGTAAACCCCAGTCATCCTTGATGAGGATGGCGCAACTGTTGCTGCTTCAGGCCATGATGAATTCTGATTTCATATCGGCTTTGACATCGGGCTTCCACACAGAGTCCTCAAAGTCTAGGTCCAGGGAGCCTTCACTAGACATACTGCTGTTACTGTTGCTCCGTCCAGCCTTGCGGTTGGGGAGCCAGTGGTAAGGAGCACGGGAGTCTCGCCGGGCCTTCCTGCGCAAACGCTTCTGCTGCATGAGCAGCTGCAGTCGCTCTACTTTGCAGCGTGTAGCTCGGTTCTCTGTTTGACGCAGCCGGTCACCTGAGGAaCCAGGAGGCTTGCACATGCGGATCTGACTCTGGCACTGCACCAGTGGGTGGAGAGTGGGCTGGGTCTCAGACGGCACTGTAGTAGGCAGGCTGTTTAGTCCAGGGGTGTGGGGAGGTGAAGGCGGTGGCGACGGTGTTGGTGAATTAGGGCTGTTGCACTGGGTCTGGTAACGGAGCTGCGTGAGCGACGGTGGCATGCCCTGGTAATGCCGGGTGGCACTTAAAAGGTCATTCAAGATTTGAAGGATGGTGCCTATATCTCGCCTGGGACGTCCAGTGCTGTCCTGACAGTTGGGATGCAAAGTGCCtAAAATGTCCCAGAAAAGACCCCAGGAGCATGGTTCACAAAACTTTCAATGATAGCCCCTGGCTTGCGGGATCGCGAAGGAGTGTTACAATTGCCAGACGTCTTTGCTGGGCAGTTGGCCTGTGCAAGATATGGGCCAGTGGTCAACTGcaagtacatttacatattttgtaaatgtaatttaacaccattattatatgaaattatttaattggaTAAGGTGGGACAAATTGTGACTAACCTCTGGACAGGAAGCTGAGGGGTTAGGGCTGCTTGGAGAGGTGGGGCAGGCTGAAGATGGCTGCTGGGAGTGAAGAAAACTTCCAGGGAGTTGAGAGGGGTGCGGTGGAGGGCTACAGTGCCCTGAGGCTGAGGTGGGGTACATTGGAGGAACGGATGGGATAGAGGGTGAAGGTGGGAAGGCCACTGGGTTAGATGGGAGCGTTGTGTTTGGATGATGGGGGTGTGGGTGATGTGGGTGAGGGTTGTGTGAAACCCGTGCCATCCCAGAGGCAGAGCCTGAAGCTGGATGAGACTGTCCTGTCGTGCCCTCTGAACTCCCACGTGATATGAGATGCCGATGCTGTAACTGTGGGCCGCCCGAGTGCTGCGCTGCCAACTGCAGTTGGACAAACATCATATGATCGCCTACTCGCAGAGCCAGGGTTAAAGGAGACCGGCCAGACAGGAAGTCACTGACCT

Function

NR:

description
PREDICTED: midnolin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223986 True 4228 lncRNA 0.43 3 10151480 10162446

Neighbor

gene id symbol gene type direction distance location
si:ch211-212d10.1 NA coding upstream 78628 10070816 ~ 10072852 (+)
cilp2 cilp2,LOC107728576,LOC107687716,LOC107655229,LOC107719612,LOC107599460 coding upstream 107268 10030870 ~ 10044212 (+)
yjefn3 yjefn3,LOC107687717,LOC107655232,LOC107719609,LOC108429551,LOC107554805,LOC103041169,LOC108271278 coding upstream 123006 9996479 ~ 10028474 (+)
LOC122327676 nr2c2ap,LOC107687739,LOC107728548,LOC107554809,LOC107719618,LOC107599487 coding upstream 265263 9884512 ~ 9886217 (+)
hapln4 hapln4,LOC107728536,LOC107599484,LOC107719665,LOC107687742,LOC107554801 coding upstream 532365 9613879 ~ 9619115 (+)
cbarpb LOC107655224,LOC107554820,LOC107719602,LOC107728578,LOC107687734 coding downstream 26768 10189214 ~ 10208785 (+)
fstl3 fstl3,LOC107687713,LOC107728592,LOC107569933,LOC107655223,LOC107554822,LOC107719601 coding downstream 61144 10223590 ~ 10231309 (+)
bsg bsg,LOC107728565,LOC107719600,LOC107569932 coding downstream 76631 10239077 ~ 10249861 (+)
hcn2b hcn2b,LOC107569045,LOC107569931,LOC107719599,LOC107655221,LOC108429559 coding downstream 88421 10250867 ~ 10279453 (+)
fgf22 fgf22,LOC107687712,LOC107569930,LOC107719646,LOC107655219,LOC107728567,LOC107569044 coding downstream 163129 10325575 ~ 10347666 (+)
LOC122327864 NA non-coding upstream 11326 10137300 ~ 10140154 (+)
G151358 NA non-coding upstream 68860 10081782 ~ 10082620 (+)
G151337 cirbpb,cirbp,LOC108271114 non-coding upstream 71335 10053918 ~ 10080145 (+)
G151334 NA non-coding upstream 254641 9896581 ~ 9896839 (+)
G151333 NA non-coding upstream 256153 9895046 ~ 9895327 (+)
G151373 NA non-coding downstream 23189 10185635 ~ 10187583 (+)
G151382 NA non-coding downstream 26132 10188578 ~ 10189172 (+)
G151487 NA non-coding downstream 185383 10347829 ~ 10348886 (+)
G151516 NA non-coding downstream 226104 10388550 ~ 10421036 (+)
G151592 NA non-coding downstream 503610 10666056 ~ 10669212 (+)
gatad2ab gatad2ab,gatad2a,LOC107599456,LOC107728574,LOC107554816 other upstream 158039 9970622 ~ 9993441 (+)
LOC122328159 NA other upstream 187846 9923547 ~ 9963634 (+)
mef2b LOC107687723,LOC107554810,LOC107728551,LOC107719669,LOC107655235,LOC107599488 other upstream 240687 9895441 ~ 9910793 (+)
borcs8 borcs8,LOC107728595,LOC107554813,LOC107599453 other upstream 257973 9888163 ~ 9893507 (+)
G151232 NA other upstream 571329 9577679 ~ 9580151 (+)
G151620 NA other downstream 643606 10806052 ~ 10837365 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other downstream 711982 10874428 ~ 10892023 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other downstream 755643 10918089 ~ 10922031 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other downstream 772589 10935035 ~ 10994944 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other downstream 1155661 11318107 ~ 11328230 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000030_02785349_02803666 MIDN coding CI01000030 null 2783629 ~ 2803666 (-)