G151820 (LOC102206479,LOC100709852,LOC101484522,LOC107676966,LOC107729686)


Basic Information

Item Value
gene id G151820
gene name LOC102206479,LOC100709852,LOC101484522,LOC107676966,LOC107729686
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 11387632 ~ 11388850 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU224646
AAACAGTCCAGCTGGGCCATCGGGCTCTTGCTGCCCGGTTGGCTGATGTCCCACACTTTGACGCAGCCTTTCCCGCCGGTGTAGACGTGACGCGTGGAGGTGCTGATGGTCACCGCACACACCACCTCTCCATGACTGAGGGTGTGGATCTGACGGGCGTGACGCGGGATGCCGGGGCCGAGGAGGGCGTCGGGAGGGAAGGGCACCGGCTGCATTTGACCATCTGCGCTCACGTGGAACGAGTACGCTCTGGGGGCGGGAACAAGGTGGATGCAAAAAAGCTGTCAGCGGGGGACTTGAGAGAGGATTGTATTACATGTGCGGCAAACAAAAGCACTATTTTGGACTAACAGTCGATACGCTGCCCATCGCTGTGCAAATCAAGGGAGGtaaaagaaagaggagaaacTCACGGCTTGCCACCGGACGAGCCAGGCAGAGAGGAGGACAGCCCCGAGGGCCTAAGATGTGAACGGGATTCATACGCTACCTGCAGAGCAAAGCATTCGTAAGCGTCAAAATGGTGTCGCGTAAACGTCTGTCAATTGCGAGAGATTCAAAAACGGTCACCATAGGGCTGCGTGTGTAGGCACTGGCTGCAGCACTGATTTGGGGCGAGAGGGTGAGCGAGCCTCCGAAGCCGCCCGGGCTGGCCAGCTCTCCGTTAAGCCCGGCGTGGGACACCACCCCGAAGTGAGCCGGGTAAGAACCGGGCGTCATGGTCAAGGGACTCCGCAGAGCTGCAGGacacacaattaaacaattattttcgTTGAATGGTAGCATGTGTTTGCTTGTAAACGCAAACAGACAATGTCTTACCCAGAGGGTCTGCCGAGGAGGCAGATTTGTTGACCAGGCGTA

Function

NR:

description
PREDICTED: transducin-like enhancer protein 1 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224646 True 864 lncRNA 0.57 2 11387632 11388850

Neighbor

gene id symbol gene type direction distance location
tle2a tle2,LOC107699413,LOC107586403,LOC107593318,LOC107729686,LOC107719561,LOC108430092 coding upstream 5895 11353277 ~ 11381737 (+)
plpp2b plpp2b,LOC107676990,LOC107593320,LOC107729714,LOC107719563,LOC107586402,LOC107699401 coding upstream 42618 11330705 ~ 11345014 (+)
shdb shdb,LOC107676987,LOC107729709,LOC107719565,LOC107586400 coding upstream 92109 11268948 ~ 11295523 (+)
shc2 shc2,LOC107729700,LOC107593314,LOC107586398,LOC107719564 coding upstream 138076 11232735 ~ 11249556 (+)
odf3l2b odf3l2,LOC107593346,LOC107676969,LOC107729669,LOC107699397,LOC107586461 coding upstream 157853 11226160 ~ 11229779 (+)
LOC122327738 LOC107717981,LOC107676948,LOC107593360,LOC107699418,LOC107586443,LOC107719634 coding downstream 118611 11507461 ~ 11512935 (+)
LOC122327737 LOC107717980,LOC107676979,LOC107719556,LOC107699417,LOC107586407 coding downstream 133154 11522004 ~ 11535741 (+)
LOC122327862 NA coding downstream 398736 11787586 ~ 11792458 (+)
LOC122328196 mrpl14,LOC107676385 coding downstream 403700 11792550 ~ 11793165 (+)
b3galt2 b3galt2,LOC107741544,LOC107715722,LOC107564918,LOC107664691,LOC107560698,LOC107655413 coding downstream 608370 11997220 ~ 12003856 (+)
G151813 NA non-coding upstream 3050 11334169 ~ 11384582 (+)
G151815 NA non-coding upstream 90479 11296908 ~ 11297153 (+)
G151750 NA non-coding upstream 204552 11182841 ~ 11183080 (+)
G151707 NA non-coding upstream 223304 11128526 ~ 11164328 (+)
LOC122327758 NA non-coding upstream 247254 11128906 ~ 11140378 (+)
G151832 NA non-coding downstream 38110 11426960 ~ 11427334 (+)
G151841 NA non-coding downstream 77013 11465863 ~ 11468274 (+)
G151903 NA non-coding downstream 161344 11550194 ~ 11550870 (+)
G151905 NA non-coding downstream 162616 11551466 ~ 11551789 (+)
G151906 NA non-coding downstream 163043 11551893 ~ 11552311 (+)
mier2 LOC107729715,LOC107593358,LOC107676949,LOC107699399,LOC107719562,LOC107586401 other upstream 59402 11318107 ~ 11328230 (+)
peak3 LOC107676959,LOC107729697,LOC107593354,LOC107655164,LOC107586433,LOC107719638,LOC107593339 other upstream 392688 10935035 ~ 10994944 (+)
si:dkey-172o19.2 LOC107729689,LOC107676945,LOC107596881,LOC107719578 other upstream 465601 10918089 ~ 10922031 (+)
onecut3a onecut3,onecut3a,LOC107596910,LOC107676954,LOC107586457,LOC107719659,LOC107655183,LOC105938949 other upstream 495609 10874428 ~ 10892023 (+)
G151620 NA other upstream 550267 10806052 ~ 10837365 (+)
LOC122327289 capn8,LOC107565180,LOC107755343,LOC107722658,LOC107655376,LOC107655329,LOC107566058,LOC107571859 other downstream 434084 11822934 ~ 11825207 (+)
LOC122327134 senp7,si:dkey-100n23.3,LOC107748206,LOC107600307,LOC107655520,LOC107571594,LOC107717676,LOC107704544,LOC107566043,LOC107704674 other downstream 437715 11826565 ~ 11835134 (+)
LOC122327127 vtg6,LOC107563524,LOC107664867,LOC107715697,LOC107664873,LOC107741562,LOC107570371,LOC107734844,LOC107570369,LOC107664832,LOC107564925,LOC107563523,LOC107715728,LOC107655401,LOC107715731,LOC107655402,LOC107576112,LOC107570370,LOC107734958,LOC107579406 other downstream 621619 12010469 ~ 12276608 (+)
LOC122327107 LOC107563522,LOC107715696,LOC108430069,LOC108271041,LOC105898241 other downstream 786837 12175687 ~ 12189006 (+)
G152032 NA other downstream 904550 12293400 ~ 12294717 (+)

Expression


Co-expression Network