kcnip2 (kcnip2,LOC107714153,LOC107679051,LOC107551372)


Basic Information

Item Value
gene id kcnip2
gene name kcnip2,LOC107714153,LOC107679051,LOC107551372
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 14071476 ~ 14078380 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU226054
CCGGTTTCTGATTGGCTCCAGGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaaacagca
>XM_043222305.1
TGTACCGTGCCCAGACGCGCCGTCTGACACGGTCTCGGAGACACGAAGTCCTGATTCACCGAGCAGGTTCATTCATTTTGCAGCAGGGCAGAGCAGATGGCAGCGAGGCGGTGCGGAGACTCTTTTATAATAACAAAGAACGACTGACTTTGATAGTACAGTCAAAACAGTCTACACATGTTCTGCGCGAGCGAACCGGATACCGGAGCGAATTCAGCAGACGACCGACGGGAACTTCTAATGGAAACATAACAACGTTATTTACTCGCCAAAAAGCCTTGCACTCACATCTGCCGGCAGACAGATAATTCGATATTGTTTCTCACTCTAAAGGgattaaaggtgttttttttttccctgactGTATTGCGCGCGAAGGCAAAATGAAGGTGAAGTCTAGAGACGAGAGTTTGAACACTTCTGGAGAATGTGACGGATCCAATGACTTGCTGACAGgtaACCCTCCCTCAGGCCAGAGCAAAAAGAACATGAAGCAGCGCTTCCTCAAACTTCTGCCCTGCTGTCACGTTGACTCCACACCATCCGTCAGGCAAAACAGTATAGAGGAAGACTTTGAGCTGGCCACTGTGTGCTGCAGACCGGATAGTCTGGAAAAAGTTATGGAACAGACCAAATTCTCCAAAACAGAGCTACAAATCCTCTATAGAAgtttcaaaaatGAATGTCCCTCTGGATTAGTAAACGAAGAGACTTTTAAGTTAATCTACTCTCACTTTTTTCCTCACGGAGATTCTAGCGCGTACGcacatttcctgtttgaggCTTTTGACAGACACAAGAACGGAGCAGTAAGTTTTGAGGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaa
>XM_043222306.1
AATAATAGGCTGTCGTTCACTAAATGCGTGCGTGAACATTTTAGCGGATAAACCTCAACCGTCTTTCatgctaaaatgtgttttgaagttAAAGAACAGCTTAAACCGAAACCATGGCGTTCTGAACGCGTTAAGATTCGATTTATCCGTATTTTAGACTTATTTCGCGCATAATATGgtaACCCTCCCTCAGGCCAGAGCAAAAAGAACATGAAGCAGCGCTTCCTCAAACTTCTGCCCTGCTGTCACGTTGACTCCACACCATCCGTCAGGCAAAACAGTATAGAGGAAGACTTTGAGCTGGCCACTGTGTGCTGCAGACCGGATAGTCTGGAAAAAGTTATGGAACAGACCAAATTCTCCAAAACAGAGCTACAAATCCTCTATAGAAgtttcaaaaatGAATGTCCCTCTGGATTAGTAAACGAAGAGACTTTTAAGTTAATCTACTCTCACTTTTTTCCTCACGGAGATTCTAGCGCGTACGcacatttcctgtttgaggCTTTTGACAGACACAAGAACGGAGCAGTAAGTTTTGAGGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaa
>XM_043222307.1
TAGAAATAAGCTGAACAGGTGTTTGAAATAATTCACCAAAATGAAGTCTCGTGAAGTAGGCTGACGACAGATACGCAAATAAAGCTCGGTAAAGAAACACACTCGGTGAAACGCGTTTTTAAGgtaACCCTCCCTCAGGCCAGAGCAAAAAGAACATGAAGCAGCGCTTCCTCAAACTTCTGCCCTGCTGTCACGTTGACTCCACACCATCCGTCAGGCAAAACAGTATAGAGGAAGACTTTGAGCTGGCCACTGTGTGCTGCAGACCGGATAGTCTGGAAAAAGTTATGGAACAGACCAAATTCTCCAAAACAGAGCTACAAATCCTCTATAGAAgtttcaaaaatGAATGTCCCTCTGGATTAGTAAACGAAGAGACTTTTAAGTTAATCTACTCTCACTTTTTTCCTCACGGAGATTCTAGCGCGTACGcacatttcctgtttgaggCTTTTGACAGACACAAGAACGGAGCAGTAAGTTTTGAGGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaa
>XM_043222308.1
ctggttttgtttgtttttccacgCCGGTAGAAATAAGCTGAACAGGTGTTTGAAATAATTCACCAAAATGAAGTCTCGTGAAGTAGGCTGACGACAGATACGCAAATAAAGCTCGgtaACCCTCCCTCAGGCCAGAGCAAAAAGAACATGAAGCAGCGCTTCCTCAAACTTCTGCCCTGCTGTCACGTTGACTCCACACCATCCGTCAGGCAAAACAGTATAGAGGAAGACTTTGAGCTGGCCACTGTGTGCTGCAGACCGGATAGTCTGGAAAAAGTTATGGAACAGACCAAATTCTCCAAAACAGAGCTACAAATCCTCTATAGAAgtttcaaaaatGAATGTCCCTCTGGATTAGTAAACGAAGAGACTTTTAAGTTAATCTACTCTCACTTTTTTCCTCACGGAGATTCTAGCGCGTACGcacatttcctgtttgaggCTTTTGACAGACACAAGAACGGAGCAGTAAGTTTTGAGGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaa
>XM_043222309.1
TGTACCGTGCCCAGACGCGCCGTCTGACACGGTCTCGGAGACACGAAGTCCTGATTCACCGAGCAGGTTCATTCATTTTGCAGCAGGGCAGAGCAGATGGCAGCGAGGCGGTGCGGAGACTCTTTTATAATAACAAAGAACGACTGACTTTGATAGTACAGTCAAAACAGTCTACACATGTTCTGCGCGAGCGAACCGGATACCGGAGCGAATTCAGCAGACGACCGACGGGAACTTCTAATGGAAACATAACAACGTTATTTACTCGCCAAAAAGCCTTGCACTCACATCTGCCGGCAGACAGATAATTCGATATTGTTTCTCACTCTAAAGGgattaaaggtgttttttttttccctgactGTATTGCGCGCGAAGGCAAAATGAAGGTGAAGTCTAGAGACGAGAGTTTGAACACTTCTGGAGAATGTGACGGATCCAATGACTTGCTGACAGgtaACCCTCCCTCAGGCCAGAGCAAAAAGAACATGAAGCAGCGCTTCCTCAAACTTCTGCCCTGCTGTCACGTTGACTCCACACCATCCGTCAGGCAAAACAGTATAGAGGAAGACTTTGAGCTGGCCACTGTGTGCTGCAGACCGGATAGTCTGGAAAAAGTTATGGAACAGACCAAATTCTCCAAAACAGAGCTACAAATCCTCTATAGAAgtttcaaaaatGATTTTGTGGTTGGCCTGTCGATCATCTTGCGTGGTACTGTTACTGAAAGACTGTCCTGGGCCTTCAGTTTGTATGATCTCAATAAAGATGGCTGCATCACTAAAGAGGAGATGAATGACATTATGAAGTCTATTTATGATATGATGGGGAAGTATACGCATCCGTGTATGAAGGACAGCGCACCTAGAGAACATGTCGAAAGTTTCTTTCAGAAAATGGATCGCAACAATGATGGCGTCGTCACTATGGAGGAGTTCCTGGAAACATGTCAAAAGgaTGAAGCCATCATGGAGTCCATGCAGATGCTGGATCATGTCATTTAGCTCCGCATGACAGTCTGAGAACAGCAACGGTGTTCGATCTGTTGTGGCGTCTTCCTGATCCGTTGAtcctccaaaaaaaataaaaaagacagtgAACACATGAACAGGTGCAAAGTGAGCATGCTATTTTACACCCCGAGGAATATATGTCTTTAAAGATCAGCTGTTATACGCCGCTGTCTCTGCATCGTCTATTTCGTTAAATGTAACgtgaagaaatatttaaagccaattcaacaacaaaaaaaaggctGTGAAAAATAAGATCTTTTCAGTTTCTTAATTTGtcgattatatatttttaggtgCACTAACACCTTATATTATACCTTACATTATTCATGCCAGATGCAATTATTTAGATTATGTTGTAACACGCTACTTTGAAGTGTATGCATACGCACAGCACTTTGCAATCAATATCACTGATGGGAAGGATTATGGAATTATGTAATGAACTATGCAAAAAATGGAATAGGTGTTGGAAGATTCACATGGTGAACATGCTCtctaattaatacatttatgtatttatatttatttatccttttcttttttattgtttttagttcATGTAGTATATTTCTGATAaacaaacattgcatttttagtacttttaaa

Function

symbol description
kcnip2 Predicted to enable calcium ion binding activity. Orthologous to human KCNIP2 (potassium voltage-gated channel interacting protein 2).

NR:

description
PREDICTED: Kv channel-interacting protein 2-like isoform X2

GO: NA

KEGG:

id description
K23855 KCNIP; Kv channel-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU226054 False 972 lncRNA 0.37 4 14076182 14078380
XM_043222305.1 True 1766 mRNA 0.41 9 14071476 14078374
XM_043222306.1 False 1488 mRNA 0.39 9 14073453 14078374
XM_043222307.1 False 1433 mRNA 0.39 9 14073822 14078374
XM_043222308.1 False 1425 mRNA 0.39 9 14073795 14078374
XM_043222309.1 False 1625 mRNA 0.41 7 14071476 14078374

Neighbor

gene id symbol gene type direction distance location
LOC122327135 LOC107704540,LOC107717663 coding upstream 523047 13541190 ~ 13548429 (+)
LOC122327695 ncf4,LOC107704554,LOC107667893,LOC107559542 coding upstream 532450 13517128 ~ 13539026 (+)
pla2g6 pla2g6,LOC107667889,LOC107704553,LOC107602675 coding upstream 574251 13480546 ~ 13497225 (+)
tp53bp2b LOC107717669,LOC107704550,LOC107667887,LOC107602677 coding upstream 611844 13438187 ~ 13459632 (+)
abi3bpb abi3bpb,LOC107566041,LOC107717674,LOC107704546,LOC107720343,LOC108436625 coding upstream 768720 13278371 ~ 13302756 (+)
arhgap19 arhgap19,LOC107679052,LOC107714154,LOC107706113,LOC107657488,LOC107588461,LOC107551371,LOC107551358 coding downstream 570 14078950 ~ 14088700 (+)
slit1b slit1b,LOC107588453,LOC107714155,LOC107551370,LOC107657487,LOC107679047 coding downstream 12170 14090550 ~ 14130334 (+)
si:ch211-126j24.1 si:ch211-126j24.1,LOC107550685,LOC107697062,LOC107588448 coding downstream 123748 14202128 ~ 14246917 (+)
klc4 klc4,LOC107753482,LOC107697060,LOC107550686,LOC102783141,LOC102306811,LOC102210354 coding downstream 170116 14248496 ~ 14270825 (+)
soul4 soul4,LOC107702255,LOC107588447,LOC107753484,LOC107697063 coding downstream 195505 14273885 ~ 14280638 (+)
G152708 NA non-coding upstream 43562 14027491 ~ 14027914 (+)
G152707 NA non-coding upstream 72228 13993072 ~ 13999248 (+)
LOC122328230 NA non-coding upstream 104251 13967107 ~ 13967225 (+)
LOC122328070 NA non-coding upstream 105664 13963124 ~ 13965812 (+)
LOC122327202 NA non-coding upstream 219040 13848734 ~ 13852436 (+)
G152725 NA non-coding downstream 68390 14146770 ~ 14147192 (+)
G152726 NA non-coding downstream 68837 14147217 ~ 14147664 (+)
G152727 LOC107551379,LOC107657486 non-coding downstream 70796 14149176 ~ 14149494 (+)
G152728 NA non-coding downstream 92783 14171163 ~ 14171473 (+)
G152729 NA non-coding downstream 93564 14171944 ~ 14172255 (+)
LOC122327219 cunh10orf76,zgc:63733,LOC107551381,LOC107714152,LOC107588454,LOC107657489 other upstream 12896 14040721 ~ 14058580 (+)
G152584 LOC107691164,LOC107602672,LOC107720370,LOC107559552,LOC107667897,LOC107736246,LOC107717652 other upstream 389529 13575738 ~ 13681947 (+)
baiap2l2b baiap2l2b,LOC107717666,LOC107704557,LOC107602661,LOC107559544,LOC107720338 other upstream 562224 13404842 ~ 13509252 (+)
G152565 NA other upstream 653069 13417464 ~ 13418407 (+)
G152558 col8a1b,LOC107717673,LOC107720377,LOC107704548,LOC107667898,LOC107602679,LOC107571642 other upstream 687699 13383153 ~ 13383777 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other downstream 205512 14283892 ~ 14313136 (+)
G152767 cp,LOC107572087,LOC107732248 other downstream 379769 14458149 ~ 14462660 (+)
G152808 LOC107588428,LOC107689379,LOC107573874,LOC107753503 other downstream 608124 14686504 ~ 14691808 (+)
sirt7 sirt7,LOC107667823,LOC107705833,LOC107569249,LOC107706268 other downstream 704002 14782382 ~ 14788693 (+)
kif14 kif14,LOC107679839,LOC107699428,LOC107719633,LOC107586446,LOC107717989 other downstream 1117536 15195916 ~ 15219764 (+)

Expression


Co-expression Network