tp53bp2b (LOC107717669,LOC107704550,LOC107667887,LOC107602677)


Basic Information

Item Value
gene id tp53bp2b
gene name LOC107717669,LOC107704550,LOC107667887,LOC107602677
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13438187 ~ 13459632 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223077.1
GGGATATTCGGGATCTCGCGCGGCGTCATCTTGGGTTGGGTTGCGTTTGTTGATCCAGCGGAAAAACCTCGCCCCGCACGGATATAACGTGGACGTGCAATCGGCTTAGCGGATACTAGCTGATACGTTCGCGGACGACCGTTATATCTTTATTTCGCTTATGTTGTATCGCGGTGGCGAATCTCTGCGTACACAAATGGTTCGGTGCGATCGGTGGTCTGCGGTTCCCCACGTCTGAACGATTCGTATGAGAAACTTCTGCTGTATTTACCGAGTTCATCTCGGGTTCATTCCGCAACAGGTTTCTATAATAAATCAACGCTGCGAAGTTGTCGCGCAACATCAGAGGAGACTGATCTAAAATAATGATACGTAAAAGAAGAGGATTTTTGcctgcataaaacaaaaataagcaaCAATTCTTGGGAGACCAGGGAAAGGTCTTTATATTCTTCATTATAAGGAATACCGAATATCTGGAGGTCTTTTTCAATATGATGCCGATGTTCCTAACGGTGTACCTCAGCAATAGCGACAAGCACTTCACAGAGCTTCCCATCACGCCGGAGACACTGTGTCGAGATGTGGTGGACATGTGTAAAGAGCCCGGGGAGGTGGACTGCTATCTGGCCGAGATGTGGAGAGGATCTGAGCGTGTGATTGGTGACAGTGAGCGAATTATCGAAGTTCTGCAGCGCTGGGGTCAGCAAAGGGCAGAAGTGCGATTCTTCCTGCGCCATGACCGAGCACCTGGCCATGATacagGAGGCCACAGGGCTCCAGAGTCTCTTGCCAGAAGAAACGCAGTAAAGGGGACAATAGACAGACACATGGAAAATGGAatggcaGCTCCTCATATGGATATCACTCTCAGTGAATTGCAAGAAATGGCATCacggcaacaacaacaaatcaacGCACAACAACAACTCCTGGCCACAAAGGAACAGCGACTGCGCTTCCTGAAGCTGCAGGACCAGCGGCAGCAGCATCAACAGGAGTCCGAGCAGGAGAAACTGCGACTGCTGCGGGAGAACGCGGAGAACCAGGAGGCCAAACTGCGCAGGGTTCGAGCTCTAAAAGGACAAGTGGAACAGAAACGCATCAGCAATAGTAAACTAGtgGAGGAGATCGAGCAGATGAACGGTCTGTTCCAGCAGAAGCAGCGGGAGCTGGTGGTGGCCGTCAGCAGGGTAGAGGAGTTGAGTCGACAACTGGACATGCTGCGTGGCGGCAAAATGGATGTCCCACATGAAGCTGGACCAAGCTCAAGTGGAGAACTAGAAAGGCTGTACAAAGAGCTCCAGCTGAGGAATAAATTGAACCAGGAGCAAAGTGCCAAACTccagcagcagagagagaatCTAAACAAGAGGAACGTAGAAATGGCCGCCATGGACAAAAGAGTGGCTGAACTGAGAGAGAGGCTCTGGAAGAAAAAAGCGGCTCTCCAGCAGAAAGAGAACTTGCCTCAGCCCTCTGAAGGACAGAGCTCTCAGCCCATGGGTCCTTCCAGGGTTGCCGCTGTTGGGCCGTACATCCAGACCACCCCAGCTCCTCCAGTTCCTCCCAGACAGGAGATTCTAGTGAAGCCTGCTTATCCTGATGGCACTGCCACCCTTCCCAAACCTCTCCCTAAACCGACCACAGGTATTGGTTTCTTGACAAGTAAGATCTCCAAGGTGTCAGATTTGTTTTCCAACACAGAAACTAACAGCAACACCCATGGCCACTCCTCCACCCTTCCTCGCATGACCAGCCATGGATCCCAGGAGAAAGATTTTGAAGCAGATTTGAAACCTCCGCCATTGCCCTTACGCAAGAACCAGAGTAGTGAGGACCTCTTGAGGGACACCCAGTCTGCAGGTAGAAGCTTTGGGAAGGTTCCTCCTCCTGTTCCAAGCAAGCCCAAACCTGCTCTACCAGGCCAGTCCACCTTCAGTAAACCTCCTTACAGCACGGGCACATTCCCTGGCAAAGCTAGACCTGCCACTCAGAAACCCCCAGTGCCCCTTCCATCTCATAACAACACATTACCCCTACCTCTGCCCCCTAAACCGGACACCTTACCTGCCGCGACAGTACGTCCTTTCACGACGGATACTTTAACAGGGAAAGAGAACTCCACCCCCACTACCCTTCACAAACCCCAGACGGTGGCAGCGAGATCCATCTACTCCATGTATACCCAACAAAGCACCCTTGGGAAGGGTTATCAAGGGCAAAGTACCCTGACCCGTTCACAGCCTCGATTATATGGTAAACCAGTCATCCCATCCAGTGGGGGCCAGCAGTCTCTTATCCAGGACAGCAGTCATCTTGAGAAAACTGGAGGTCTAGATGGTGACCAAGTGGACCAGGGAAACAATATGGCCACTGCATCCTCCTCTGTTGAGGGGCAGGAGGTTGAACGTGCTCCCCGGCCCCTCAGCCCAACAAAACTTCTTCCATTCCTCTCAAATTCTCATCGGCTACAGAGCGATGCTGATTTGGAGGCACTGAGGAAGAGACTGCACCATGCTCCCAGACCTCTTAAAAAGCGTGGTTCTATAACAGAATCTGAGGGGCCTGGTGGACCCAACATCCAGAAGCTCCTCTACCAGAAGACAACGTTGGCAGCCATGGAGACCACTATAACCCCAGCTGCCTTCTTTCAGGCAGAAGGTGAAGATGGATGCAGGCCAGTAGCTGACGAGAACACTAGACCCCATGAGGGACACCGTGATACTACGATACCTGAGTgtgagaaagaggaggaggatcTGACACCTCCACCACTTCCACCTCGATCGCCTATCCTGGAGGACAGCAGCATTCCCAGCATTGTACTGAAGGAACCACCGCTGAAGGAAGAACAGGAAGTCTATGGCCCAGCTGCTCCAGAACCATATGTTGAGGAGTACCCACCTTACCCTCCACCTCCATATCCCAGCATGACAGAGCAGGAGGGAACAGGCGAGGACAGTGTCAATATGAAGGCTCCAGAGGTCACAGGACAGGTCATGCTACCACCGGGCAAAAGAACAAACCTGCGTAAAACAGGCTCGGAGCGCATCAACCACGGGATGCGTGTCCGCTTTAACCCTCTGGCCCTTCTGTTGGACTCCTCTTTAGAGGGCGAGTACGACCTCGTCCAGAGGATCATATATGAGGTGGAAGACCCCAGTTTACCCAATGATGAGGGCATTACCGCTCTGCACAATGCTGTGTGCGCTGGACACACGGAAATCGTAAAGTTCCTGGTGCAGTTTGGAGTAAACGTGAACGCAGCAGACAGTGATGGATGGACTCCCCTGCACTGCGCTGCTTCCTGTAATAACGTGCAAGTATGTAAATTCCTGGTGGAATCTGGAGCTGCCGTATACGCCACAACCTACAGCGATATGCAGACGGCGGCTGACAAGTGTGAGGAGATGGAAGAAGGTTACGCACAATGTTCACAGTTTCTCTATGgtgTTCAGGAGAAGATGGGCATCATGAACAGGGGCGTTGTTTACGCCCTGTGGGACTATGACGTTGAGAGCCTGGACGAATTGTCCTTTAAGGAAGGAGACTGTCTGACCGTCCTACGAAGAGAGGACAGTGAAGAAACGGAGTGGTGGTGGGCGAGATGTGCCGACAATGAGGGCTACATACCTCGCAACCTCCTCGGGCTTTACCCCAGAATCAAGCCCAGACAGAGGAGCCTTGCGTAAACTCTCCAAATCAGCGCTGATGTGCCTGGAGTTTTGTCTACCATTTCAACAGTTGCTTAATTCTGCaaagcaaaattacattttgaagatGAACTCATCCCATTTACATGGTGAAAAGATTAAGAATAGTTTCATGTTGGTAtgttatacatgtttttaaggTTAAAAGCTTTGGTAGAAGAAGTAGACTTGGATGAACATTTCAGAAGGTTTAAGCATGTAAAGTTAAGTGAAAGAGGAATGAAGAATTTAAGAATAGTATTACGGCTCAAATGAAGGATGTCAGATGTAGTGAtgtcatttttcatctttttgaaCAAAGTGTCCGTTTTCACAAATGCTGATTTGTTTCGCAAATCGCGaaacgaaaaaaaaagcattcatctTTTGAAGGAAAATAAgagttttatataatatttttttcttttttattttattcataacgCCATGTTACGTAAAACCTATTCTTATGGTGCTTGCTGCTACGCTACAACAGTGTGTTCTGTGaacaattaacaatttattgCGCAAAGTTAGCTTTCATTTATCATAATAAAACTTGTCAAAACTCTTAAA
>XM_043223078.1
GGGATATTCGGGATCTCGCGCGGCGTCATCTTGGGTTGGGTTGCGTTTGTTGATCCAGCGGAAAAACCTCGCCCCGCACGGATATAACGTGGACGTGCAATCGGCTTAGCGGATACTAGCTGATACGTTCGCGGACGACCGTTATATCTTTATTTCGCTTATGTTGTATCGCGGTGGCGAATCTCTGCGTACACAAATGGTTCGGTGCGATCGGTGGTCTGCGGTTCCCCACGTCTGAACGATTCGTATGAGAAACTTCTGCTGTATTTACCGAGTTCATCTCGGGTTCATTCCGCAACAGGTTTCTATAATAAATCAACGCTGCGAAGTTGTCGCGCAACATCAGAGGAGACTGATCTAAAATAATGATACGTAAAAGAAGAGGATTTTTGcctgcataaaacaaaaataagcaaCAATTCTTGGGAGACCAGGGAAAGGTCTTTATATTCTTCATTATAAGGAATACCGAATATCTGGAGGTCTTTTTCAATATGATGCCGATGTTCCTAACGGTGTACCTCAGCAATAGCGACAAGCACTTCACAGAGCTTCCCATCACGCCGGAGACACTGTGTCGAGATGTGGTGGACATGTGTAAAGAGCCCGGGGAGGTGGACTGCTATCTGGCCGAGATGTGGAGAGGATCTGAGCGTGTGATTGGTGACAGTGAGCGAATTATCGAAGTTCTGCAGCGCTGGGGTCAGCAAAGGGCAGAAGTGCGATTCTTCCTGCGCCATGACCGAGCACCTGGCCATGATacagGAGGCCACAGGGCTCCAGAGTCTCTTGCCAGAAGAAACGCAGTAAAGGGGACAATAGACAGACACATGGAAAATGGAatggcaGCTCCTCATATGGATATCACTCTCAGTGAATTGCAAGAAATGGCATCacggcaacaacaacaaatcaacGCACAACAACAACTCCTGGCCACAAAGGAACAGCGACTGCGCTTCCTGAAGCTGCAGGACCAGCGGCAGCAGCATCAACAGGAGTCCGAGCAGGAGAAACTGCGACTGCTGCGGGAGAACGCGGAGAACCAGGAGGCCAAACTGCGCAGGGTTCGAGCTCTAAAAGGACAAGTGGAACAGAAACGCATCAGCAATAGTAAACTAGtgGAGGAGATCGAGCAGATGAACGGTCTGTTCCAGCAGAAGCAGCGGGAGCTGGTGGTGGCCGTCAGCAGGGTAGAGGAGTTGAGTCGACAACTGGACATGCTGCGTGGCGGCAAAATGGATGTCCCACATGAAGCTGGACCAAGCTCAAGTGGAGAACTAGAAAGGCTGTACAAAGAGCTCCAGCTGAGGAATAAATTGAACCAGGAGCAAAGTGCCAAACTccagcagcagagagagaatCTAAACAAGAGGAACGTAGAAATGGCCGCCATGGACAAAAGAGTGGCTGAACTGAGAGAGAGGCTCTGGAAGAAAAAAGCGGCTCTCCAGCAGAAAGAGAACTTGCCTCCCTCTGAAGGACAGAGCTCTCAGCCCATGGGTCCTTCCAGGGTTGCCGCTGTTGGGCCGTACATCCAGACCACCCCAGCTCCTCCAGTTCCTCCCAGACAGGAGATTCTAGTGAAGCCTGCTTATCCTGATGGCACTGCCACCCTTCCCAAACCTCTCCCTAAACCGACCACAGGTATTGGTTTCTTGACAAGTAAGATCTCCAAGGTGTCAGATTTGTTTTCCAACACAGAAACTAACAGCAACACCCATGGCCACTCCTCCACCCTTCCTCGCATGACCAGCCATGGATCCCAGGAGAAAGATTTTGAAGCAGATTTGAAACCTCCGCCATTGCCCTTACGCAAGAACCAGAGTAGTGAGGACCTCTTGAGGGACACCCAGTCTGCAGGTAGAAGCTTTGGGAAGGTTCCTCCTCCTGTTCCAAGCAAGCCCAAACCTGCTCTACCAGGCCAGTCCACCTTCAGTAAACCTCCTTACAGCACGGGCACATTCCCTGGCAAAGCTAGACCTGCCACTCAGAAACCCCCAGTGCCCCTTCCATCTCATAACAACACATTACCCCTACCTCTGCCCCCTAAACCGGACACCTTACCTGCCGCGACAGTACGTCCTTTCACGACGGATACTTTAACAGGGAAAGAGAACTCCACCCCCACTACCCTTCACAAACCCCAGACGGTGGCAGCGAGATCCATCTACTCCATGTATACCCAACAAAGCACCCTTGGGAAGGGTTATCAAGGGCAAAGTACCCTGACCCGTTCACAGCCTCGATTATATGGTAAACCAGTCATCCCATCCAGTGGGGGCCAGCAGTCTCTTATCCAGGACAGCAGTCATCTTGAGAAAACTGGAGGTCTAGATGGTGACCAAGTGGACCAGGGAAACAATATGGCCACTGCATCCTCCTCTGTTGAGGGGCAGGAGGTTGAACGTGCTCCCCGGCCCCTCAGCCCAACAAAACTTCTTCCATTCCTCTCAAATTCTCATCGGCTACAGAGCGATGCTGATTTGGAGGCACTGAGGAAGAGACTGCACCATGCTCCCAGACCTCTTAAAAAGCGTGGTTCTATAACAGAATCTGAGGGGCCTGGTGGACCCAACATCCAGAAGCTCCTCTACCAGAAGACAACGTTGGCAGCCATGGAGACCACTATAACCCCAGCTGCCTTCTTTCAGGCAGAAGGTGAAGATGGATGCAGGCCAGTAGCTGACGAGAACACTAGACCCCATGAGGGACACCGTGATACTACGATACCTGAGTgtgagaaagaggaggaggatcTGACACCTCCACCACTTCCACCTCGATCGCCTATCCTGGAGGACAGCAGCATTCCCAGCATTGTACTGAAGGAACCACCGCTGAAGGAAGAACAGGAAGTCTATGGCCCAGCTGCTCCAGAACCATATGTTGAGGAGTACCCACCTTACCCTCCACCTCCATATCCCAGCATGACAGAGCAGGAGGGAACAGGCGAGGACAGTGTCAATATGAAGGCTCCAGAGGTCACAGGACAGGTCATGCTACCACCGGGCAAAAGAACAAACCTGCGTAAAACAGGCTCGGAGCGCATCAACCACGGGATGCGTGTCCGCTTTAACCCTCTGGCCCTTCTGTTGGACTCCTCTTTAGAGGGCGAGTACGACCTCGTCCAGAGGATCATATATGAGGTGGAAGACCCCAGTTTACCCAATGATGAGGGCATTACCGCTCTGCACAATGCTGTGTGCGCTGGACACACGGAAATCGTAAAGTTCCTGGTGCAGTTTGGAGTAAACGTGAACGCAGCAGACAGTGATGGATGGACTCCCCTGCACTGCGCTGCTTCCTGTAATAACGTGCAAGTATGTAAATTCCTGGTGGAATCTGGAGCTGCCGTATACGCCACAACCTACAGCGATATGCAGACGGCGGCTGACAAGTGTGAGGAGATGGAAGAAGGTTACGCACAATGTTCACAGTTTCTCTATGgtgTTCAGGAGAAGATGGGCATCATGAACAGGGGCGTTGTTTACGCCCTGTGGGACTATGACGTTGAGAGCCTGGACGAATTGTCCTTTAAGGAAGGAGACTGTCTGACCGTCCTACGAAGAGAGGACAGTGAAGAAACGGAGTGGTGGTGGGCGAGATGTGCCGACAATGAGGGCTACATACCTCGCAACCTCCTCGGGCTTTACCCCAGAATCAAGCCCAGACAGAGGAGCCTTGCGTAAACTCTCCAAATCAGCGCTGATGTGCCTGGAGTTTTGTCTACCATTTCAACAGTTGCTTAATTCTGCaaagcaaaattacattttgaagatGAACTCATCCCATTTACATGGTGAAAAGATTAAGAATAGTTTCATGTTGGTAtgttatacatgtttttaaggTTAAAAGCTTTGGTAGAAGAAGTAGACTTGGATGAACATTTCAGAAGGTTTAAGCATGTAAAGTTAAGTGAAAGAGGAATGAAGAATTTAAGAATAGTATTACGGCTCAAATGAAGGATGTCAGATGTAGTGAtgtcatttttcatctttttgaaCAAAGTGTCCGTTTTCACAAATGCTGATTTGTTTCGCAAATCGCGaaacgaaaaaaaaagcattcatctTTTGAAGGAAAATAAgagttttatataatatttttttcttttttattttattcataacgCCATGTTACGTAAAACCTATTCTTATGGTGCTTGCTGCTACGCTACAACAGTGTGTTCTGTGaacaattaacaatttattgCGCAAAGTTAGCTTTCATTTATCATAATAAAACTTGTCAAAACTCTTAAA

Function

NR:

description
PREDICTED: apoptosis-stimulating of p53 protein 2-like isoform X4

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0045786 negative regulation of cell cycle biological_process
GO:0007165 signal transduction biological_process
GO:0008134 transcription factor binding molecular_function

KEGG:

id description
K17554 PPP1R13B, ASPP1; apoptosis-stimulating of p53 protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223077.1 True 4271 mRNA 0.49 18 13438187 13459632
XM_043223078.1 False 4268 mRNA 0.49 18 13438187 13459632

Neighbor

gene id symbol gene type direction distance location
abi3bpb abi3bpb,LOC107566041,LOC107717674,LOC107704546,LOC107720343,LOC108436625 coding upstream 135431 13278371 ~ 13302756 (+)
senp7b LOC107717676,LOC107704544,LOC107704674,LOC107566043 coding upstream 211349 13202689 ~ 13226838 (+)
LOC122327210 NA coding upstream 363274 13063303 ~ 13074913 (+)
si:dkey-246e1.3 NA coding upstream 481879 12950609 ~ 12956308 (+)
tmem186 NA coding upstream 562853 12863320 ~ 12875334 (+)
pla2g6 pla2g6,LOC107667889,LOC107704553,LOC107602675 coding downstream 20914 13480546 ~ 13497225 (+)
LOC122327695 ncf4,LOC107704554,LOC107667893,LOC107559542 coding downstream 57496 13517128 ~ 13539026 (+)
LOC122327135 LOC107704540,LOC107717663 coding downstream 81558 13541190 ~ 13548429 (+)
arhgap19 arhgap19,LOC107679052,LOC107714154,LOC107706113,LOC107657488,LOC107588461,LOC107551371,LOC107551358 coding downstream 619318 14078950 ~ 14088700 (+)
slit1b slit1b,LOC107588453,LOC107714155,LOC107551370,LOC107657487,LOC107679047 coding downstream 630918 14090550 ~ 14130334 (+)
G152557 col8a1b,col8a1,LOC107717673,LOC107602679,LOC107704548,LOC107667898,LOC107571642,LOC107720377,LOC108436628 non-coding upstream 55614 13379693 ~ 13382573 (+)
G152526 LOC107667894,LOC107571641,LOC107720378 non-coding upstream 82519 13354567 ~ 13355668 (+)
G152521 NA non-coding upstream 127826 13309841 ~ 13310361 (+)
G152520 LOC107695509,LOC107701922 non-coding upstream 129115 13307044 ~ 13309072 (+)
G152519 NA non-coding upstream 131268 13306427 ~ 13306919 (+)
G152569 LOC107559555,LOC107667899,LOC107704551,LOC107720376,LOC107717670 non-coding downstream 5728 13465360 ~ 13468243 (+)
G152571 LOC107717667,LOC107704552,LOC107602676 non-coding downstream 12563 13472195 ~ 13476508 (+)
G152578 NA non-coding downstream 80625 13540257 ~ 13540795 (+)
G152585 NA non-coding downstream 124153 13583785 ~ 13689603 (+)
LOC122327079 NA non-coding downstream 191869 13651501 ~ 13653037 (+)
G152565 NA other upstream 19780 13417464 ~ 13418407 (+)
G152558 col8a1b,LOC107717673,LOC107720377,LOC107704548,LOC107667898,LOC107602679,LOC107571642 other upstream 54410 13383153 ~ 13383777 (+)
LOC122327212 NA other upstream 257912 13176427 ~ 13180275 (+)
LOC122327162 NA other upstream 325454 13107506 ~ 13112733 (+)
LOC122327156 NA other upstream 339431 13067414 ~ 13098756 (+)
G152584 LOC107691164,LOC107602672,LOC107720370,LOC107559552,LOC107667897,LOC107736246,LOC107717652 other downstream 116106 13575738 ~ 13681947 (+)
LOC122327219 cunh10orf76,zgc:63733,LOC107551381,LOC107714152,LOC107588454,LOC107657489 other downstream 581089 14040721 ~ 14058580 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other downstream 611844 14071476 ~ 14078380 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other downstream 824260 14283892 ~ 14313136 (+)
G152767 cp,LOC107572087,LOC107732248 other downstream 998517 14458149 ~ 14462660 (+)

Expression


Co-expression Network