G152578


Basic Information

Item Value
gene id G152578
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13540257 ~ 13540795 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU225860
GTGAAATGAAGAACAACGAGACGTGGGTTGAACTCAAAGTATCAGTCTTTAATGATCTAAAatattctatttatatttaaactaatacattttaggttttactataatttcatataaaattgttaaataaagaatAGAAAATAAGATATTCATTATTGACGTACTTTAAtgttagttcattttaatatctaaaacaTGCAAACGTC

Function

NR:

description
PREDICTED: RNA pseudouridylate synthase domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225860 True 206 lncRNA 0.23 2 13540257 13540795

Neighbor

gene id symbol gene type direction distance location
LOC122327695 ncf4,LOC107704554,LOC107667893,LOC107559542 coding upstream 1231 13517128 ~ 13539026 (+)
pla2g6 pla2g6,LOC107667889,LOC107704553,LOC107602675 coding upstream 43032 13480546 ~ 13497225 (+)
tp53bp2b LOC107717669,LOC107704550,LOC107667887,LOC107602677 coding upstream 80625 13438187 ~ 13459632 (+)
abi3bpb abi3bpb,LOC107566041,LOC107717674,LOC107704546,LOC107720343,LOC108436625 coding upstream 237501 13278371 ~ 13302756 (+)
senp7b LOC107717676,LOC107704544,LOC107704674,LOC107566043 coding upstream 313419 13202689 ~ 13226838 (+)
LOC122327135 LOC107704540,LOC107717663 coding downstream 395 13541190 ~ 13548429 (+)
arhgap19 arhgap19,LOC107679052,LOC107714154,LOC107706113,LOC107657488,LOC107588461,LOC107551371,LOC107551358 coding downstream 538155 14078950 ~ 14088700 (+)
slit1b slit1b,LOC107588453,LOC107714155,LOC107551370,LOC107657487,LOC107679047 coding downstream 549755 14090550 ~ 14130334 (+)
si:ch211-126j24.1 si:ch211-126j24.1,LOC107550685,LOC107697062,LOC107588448 coding downstream 661333 14202128 ~ 14246917 (+)
klc4 klc4,LOC107753482,LOC107697060,LOC107550686,LOC102783141,LOC102306811,LOC102210354 coding downstream 707701 14248496 ~ 14270825 (+)
G152571 LOC107717667,LOC107704552,LOC107602676 non-coding upstream 63749 13472195 ~ 13476508 (+)
G152569 LOC107559555,LOC107667899,LOC107704551,LOC107720376,LOC107717670 non-coding upstream 72014 13465360 ~ 13468243 (+)
G152557 col8a1b,col8a1,LOC107717673,LOC107602679,LOC107704548,LOC107667898,LOC107571642,LOC107720377,LOC108436628 non-coding upstream 157684 13379693 ~ 13382573 (+)
G152526 LOC107667894,LOC107571641,LOC107720378 non-coding upstream 184589 13354567 ~ 13355668 (+)
G152521 NA non-coding upstream 229896 13309841 ~ 13310361 (+)
G152585 NA non-coding downstream 42990 13583785 ~ 13689603 (+)
LOC122327079 NA non-coding downstream 110706 13651501 ~ 13653037 (+)
LOC122328069 LOC107602652,LOC107717663,LOC107704540 non-coding downstream 112270 13653065 ~ 13653510 (+)
G152644 NA non-coding downstream 262039 13802834 ~ 13803281 (+)
G152643 NA non-coding downstream 290508 13831303 ~ 13833186 (+)
baiap2l2b baiap2l2b,LOC107717666,LOC107704557,LOC107602661,LOC107559544,LOC107720338 other upstream 31005 13404842 ~ 13509252 (+)
G152565 NA other upstream 121850 13417464 ~ 13418407 (+)
G152558 col8a1b,LOC107717673,LOC107720377,LOC107704548,LOC107667898,LOC107602679,LOC107571642 other upstream 156480 13383153 ~ 13383777 (+)
LOC122327212 NA other upstream 359982 13176427 ~ 13180275 (+)
LOC122327162 NA other upstream 427524 13107506 ~ 13112733 (+)
G152584 LOC107691164,LOC107602672,LOC107720370,LOC107559552,LOC107667897,LOC107736246,LOC107717652 other downstream 34943 13575738 ~ 13681947 (+)
LOC122327219 cunh10orf76,zgc:63733,LOC107551381,LOC107714152,LOC107588454,LOC107657489 other downstream 499926 14040721 ~ 14058580 (+)
kcnip2 kcnip2,LOC107714153,LOC107679051,LOC107551372 other downstream 530681 14071476 ~ 14078380 (+)
ptk7a ptk7a,LOC107702250,LOC107732247,LOC107588446,LOC107550662,LOC107697061 other downstream 743097 14283892 ~ 14313136 (+)
G152767 cp,LOC107572087,LOC107732248 other downstream 917354 14458149 ~ 14462660 (+)

Expression


Co-expression Network