G15151


Basic Information

Item Value
gene id G15151
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3847474 ~ 3847704 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU16935
GTGTTGTATGTTCAAAACACCGGCAGGCCAAAAGGCCACATACTGAAACTTTAAGAGTTCCATCAGCGAGAACTCACGGATTTGTAGACTCAGAACCGCCACGTAATCATCGAAAATCAGATCAAACAGCGTTTTACATTAAAGGCACAATATGTAAGATTTTTGGATTAAAAACATAAAACAAAAAAATAGAACAATGTTATATATTTTGTTGACTTGTGTAGTTACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16935 True 231 lncRNA 0.35 1 3847474 3847704

Neighbor

gene id symbol gene type direction distance location
CI01000001_03779021_03796563 RAPGEF3 coding downstream 50911 3777809 ~ 3796563 (-)
CI01000001_03623291_03628923 DAZAP2 coding downstream 218551 3623223 ~ 3628923 (-)
CI01000001_03603684_03607612 NA coding downstream 239862 3603346 ~ 3607612 (-)
CI01000001_03534862_03537560 NA coding downstream 309914 3534307 ~ 3537560 (-)
CI01000001_03515448_03525499 CS, CS.L coding downstream 321975 3514972 ~ 3525499 (-)
CI01000001_03848621_03850592 NA coding upstream 709 3848413 ~ 3850798 (-)
CI01000001_03853690_03853904 NA coding upstream 5966 3853670 ~ 3853904 (-)
CI01000001_04060101_04062122 NA coding upstream 211806 4059510 ~ 4062793 (-)
CI01000001_04334653_04338081 NA coding upstream 486459 4334163 ~ 4338769 (-)
CI01000001_04343042_04345953 NA coding upstream 495330 4342041 ~ 4346641 (-)
G15097 NA non-coding downstream 11551 3804334 ~ 3835923 (-)
G15099 NA non-coding downstream 109105 3735786 ~ 3738369 (-)
G15113 NA non-coding downstream 145245 3693592 ~ 3702229 (-)
CI01000001_03497808_03500098 RUXG, SNRPGP15, SNRPG.S, SNRPG non-coding downstream 347266 3497483 ~ 3500208 (-)
G15030 NA non-coding downstream 360067 3485842 ~ 3487407 (-)
G15093 NA non-coding upstream 16468 3864172 ~ 3867265 (-)
G15186 NA non-coding upstream 48683 3896387 ~ 3896634 (-)
G15246 NA non-coding upstream 133765 3981469 ~ 3981676 (-)
G15267 NA non-coding upstream 143046 3990750 ~ 3990978 (-)
G15272 NA non-coding upstream 147946 3995650 ~ 3995885 (-)
CI01000001_02258523_02262621 NA other downstream 1550262 2258442 ~ 2263103 (-)
G14228 NA other downstream 1790996 2055974 ~ 2056478 (-)
G14219 NA other downstream 1852576 1994210 ~ 1994898 (-)
G14104 NA other downstream 2080016 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 3450341 361614 ~ 378213 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 544610 4392314 ~ 4399804 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 628580 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 721378 4725927 ~ 4728210 (-)
G15736 NA other upstream 953197 4800901 ~ 4801395 (-)
G16332 NA other upstream 1102985 4950689 ~ 4957842 (-)

Expression


Co-expression Network