G15443


Basic Information

Item Value
gene id G15443
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4215518 ~ 4220189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17264
GCAGGTCTGGTTCCCAAAAAGCACAGTGACTCTGCTGCCCGCCCCCAGGTTTTCCCCCATTATGGTCACTTTAGTTCCTCCAGACTCTGGACCTCGACTGGGGGACAAACCTGTGACTGATGGCATCACAAAGGAATAGAGCTGAGAAGAGCGGGTCTGGAGCTCCGGTTTACACTCCCCTACACACAAATGGACAGGGCCGGGCTTACTGTCCTTAGGAGTTGCATCCATCTCACAAACAATCCTGAGAAAGAAGAAATATACTATGTTACATTACATTTTAATCTTGGCTTGAATGAAAGTCACCTAAATGAATGGCTATCACCATTATCACCCCTTCATAGCTTCTGTACAAACAGATCCCTGTTCCTATGATTACAAAGCTTCTGGACTTCATCCAGACTAAGGAACCAAAGCATTGGAAGTCATCTCCAGTCCTGCTGAGTGATCAGTATGCATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17264 True 461 lncRNA 0.37 2 4215518 4220189

Neighbor

gene id symbol gene type direction distance location
CI01000001_04060101_04062122 NA coding downstream 152725 4059510 ~ 4062793 (-)
CI01000001_03853690_03853904 NA coding downstream 361614 3853670 ~ 3853904 (-)
CI01000001_03848621_03850592 NA coding downstream 364720 3848413 ~ 3850798 (-)
CI01000001_03779021_03796563 RAPGEF3 coding downstream 418955 3777809 ~ 3796563 (-)
CI01000001_03623291_03628923 DAZAP2 coding downstream 586595 3623223 ~ 3628923 (-)
CI01000001_04334653_04338081 NA coding upstream 113974 4334163 ~ 4338769 (-)
CI01000001_04343042_04345953 NA coding upstream 122845 4342041 ~ 4346641 (-)
CI01000001_04378975_04384527 SDCBP2, SDCB1, SDCBP coding upstream 158696 4378885 ~ 4384586 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 175184 4392314 ~ 4399804 (-)
CI01000001_04402985_04419845 NA coding upstream 182591 4402780 ~ 4419877 (-)
G15489 NA non-coding downstream 108849 4106154 ~ 4106669 (-)
G15442 NA non-coding downstream 158937 4042783 ~ 4056581 (-)
G15272 NA non-coding downstream 219633 3995650 ~ 3995885 (-)
G15267 NA non-coding downstream 224540 3990750 ~ 3990978 (-)
G15246 NA non-coding downstream 233842 3981469 ~ 3981676 (-)
G15563 NA non-coding upstream 32795 4252984 ~ 4255024 (-)
G15533 NA non-coding upstream 49943 4270132 ~ 4317068 (-)
G15529 NA non-coding upstream 79379 4299568 ~ 4311601 (-)
G15605 NA non-coding upstream 119095 4339284 ~ 4341218 (-)
CI01000001_02258523_02262621 NA other downstream 1918306 2258442 ~ 2263103 (-)
G14228 NA other downstream 2159040 2055974 ~ 2056478 (-)
G14219 NA other downstream 2220620 1994210 ~ 1994898 (-)
G14104 NA other downstream 2448060 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 3818385 361614 ~ 378213 (-)
CI01000001_04468566_04523431 DNMT3BB.1 other upstream 256095 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 348893 4725927 ~ 4728210 (-)
G15736 NA other upstream 580712 4800901 ~ 4801395 (-)
G16332 NA other upstream 730500 4950689 ~ 4957842 (-)

Expression


Co-expression Network