birc7 (birc7,LOC107724202,LOC107601340,LOC107696998,LOC107705661,LOC107594456)


Basic Information

Item Value
gene id birc7
gene name birc7,LOC107724202,LOC107601340,LOC107696998,LOC107705661,LOC107594456
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4920148 ~ 4927439 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043224430.1
CCCTTTCCGATCCCGATCCCGATCCCTGGAGCGAGAACGACTGCGCTTACGAGACTCCCGCTCCTTCCCCGCGGTGTCCAGGTCCTTCTTATCAGATGAGTCACCCGCCATctggagagagggagaaagaagGCTATATGGCCAGCGGAGGGGGGGCCGAAGCACACTTGAACGGTCCACTATGGAAGGAGAGCAGGATGCGGGGAGATCGTGGACATGAGCGCGAGAGGAGCGCACGGTTCGGGATGCGGAGTGAGGAGGAGAGACTCAAGACTTTCCGAAACTGGCCCACAGACGCGCCCGTGAGCCCCTCGGAGCTGGCCCGGGCTGGCTTTCACTATCTGGGCTACGGGGACACGGTGCGGTGCTTCTGCTGCGACGGGGTCCTGAGGCACTGGGCGCACGGAGACACTCCGCGGGGTGAGCACGAGAGGCACTTCCCCGCGTGCGGCCTGATGCTGGGCAGGGATGTGGGGAATGTCCCGCTGCGCTCGGACTCCGTGGACGGGCAGCTCTTGAGTCAGCTGCAGCGGCTGACCGTGGACGAGCAGGTGTTGTCCGGACAGGCGGTGTACCCGGAGATGGAGTCGGAGGACAGCAGACTGTCCACGTATCGCGGCTGGCCCACGGGAGCGTCGGTGCAGCCGGACGCGCTCGCGCACGCGGGCTTCTTCTACACAGGCCATGGCGACAGTGTGAAGTGTTTCTTCTGTGATGGTGGACTGAGGAACTGGGAGCCAGGAGATGACCCCTGGCAGGAGCACGCCAAGTGGTTTCCTCAATGTGAATATTTGCTTCAGTCCAGAGGACGGGAATATGTGAGCAATATTCAGCAGTCCTACTTCAACATGAATGAGAGCGTGaGTGGATCTTCGTCATCAACTGCAGGGAATATTACATCAGAGGTGCTGGGTGGGCAGAACTCGGTGGCGGCGGGCATGCTGTCCCCTGTGGTGCAGGCGGTGCTGCAGATGGGTTTCCAGCGCTCGCTGGTGGAGAGCCTGGTGCAGTCACGCTACCTGCTCACCGGCTCACACTACACCTCGGTCTCTGACCTGGTGACCGACGTCCTGCAGgccgaggaggaggagagacagCCCGGGGAGCCCAGACCAGAGACTGTGGGGAGGCAGAGAACACCAAGAACGCAGGTCTCAGAGAGGGAGAAAGTGCGATCAGACCTGAGTCCAGAGGAACAGCTGAGACAGCTTCAGGAAGAGAGAACCTGTAAGGTCTGTATGGACAAACTGGTCTCCATGGTCTTCATCCCCTGCGGTCACCTGGTCGTCTGCACAGACTGCGCAGCCAGTCTGCGGCACTGCCCCATATGCAGGGCAGTCATCCGGGGGAGTGTGCGAGCATTCATGTCGTGAATTATACTGCACTATATAATGGATATatgatggaaaaaaatactcaaaaactTTTATAGATGCCTCCAATTCAGCATCAGTGCACCGACACAAAGATATATTGCTTGATATTTGGCTATACATTAAAGCTACAGGGGTCCaaaaatttcacaataatat
>XM_043224431.1
CCCTTTCCGATCCCGATCCCGATCCCTGGAGCGAGAACGACTGCGCTTACGAGACTCCCGCTCCTTCCCCGCGGTGTCCAGGTCCTTCTTATCAGATGAGTCACCCGCCATctggagagagggagaaagaagGCTATATGGCCAGCGGAGGGGGGGCCGAAGCACACTTGAACGGTCCACTATGGAAGGAGAGCAGGATGCGGGGAGATCGTGGACATGAGCGCGAGAGGAGCGCACGGTTCGGGATGCGGAGTGAGGAGGAGAGACTCAAGACTTTCCGAAACTGGCCCACAGACGCGCCCGTGAGCCCCTCGGAGCTGGCCCGGGCTGGCTTTCACTATCTGGGCTACGGGGACACGGTGCGGTGCTTCTGCTGCGACGGGGTCCTGAGGCACTGGGCGCACGGAGACACTCCGCGGGGTGAGCACGAGAGGCACTTCCCCGCGTGCGGCCTGATGCTGGGCAGGGATGTGGGGAATGTCCCGCTGCGCTCGGACTCCGTGGACGGGCAGCTCTTGAGTCAGCTGCAGCGGCTGACCGTGGACGAGCAGGTGTTGTCCGGACAGGCGGTGTACCCGGAGATGGAGTCGGAGGACAGCAGACTGTCCACGTATCGCGGCTGGCCCACGGGAGCGTCGGTGCAGCCGGACGCGCTCGCGCACGCGGGCTTCTTCTACACAGGCCATGGCGACAGTGTGAAGTGTTTCTTCTGTGATGGTGGACTGAGGAACTGGGAGCCAGGAGATGACCCCTGGCAGGAGCACGCCAAGTGGTTTCCTCAATGTGAATATTTGCTTCAGTCCAGAGGACGGGAATATGTGAGCAATATTCAGCAGTCCTACTTCAACATGAATGAGAGCGTGaGTGGATCTTCGTCATCAACTGCAGGGAATATTACATCAGAGGTGCTGGGTGGGCAGAACTCGGTGGCGGCGGGCATGCTGTCCCCTGTGGTGCAGGCGGTGCTGCAGATGGGTTTCCAGCGCTCGCTGGTGGAGAGCCTGGTGCAGTCACGCTACCTGCTCACCGGCTCACACTACACCTCGGTCTCTGACCTGGTGACCGACGTCCTGCAGgccgaggaggaggagagacagCCCGGGGAGCCCAGACCAGTGCGATCAGACCTGAGTCCAGAGGAACAGCTGAGACAGCTTCAGGAAGAGAGAACCTGTAAGGTCTGTATGGACAAACTGGTCTCCATGGTCTTCATCCCCTGCGGTCACCTGGTCGTCTGCACAGACTGCGCAGCCAGTCTGCGGCACTGCCCCATATGCAGGGCAGTCATCCGGGGGAGTGTGCGAGCATTCATGTCGTGAATTATACTGCACTATATAATGGATATatgatggaaaaaaatactcaaaaactTTTATAGATGCCTCCAATTCAGCATCAGTGCACCGACACAAAGATATATTGCTTGATATTTGGCTATACATTAAAGCTACAGGGGTCCaaaaatttcacaataatat

Function

symbol description
birc7 Predicted to enable cysteine-type endopeptidase inhibitor activity involved in apoptotic process and ubiquitin protein ligase activity. Predicted to be involved in negative regulation of apoptotic process; positive regulation of protein ubiquitination; and regulation of cell cycle. Predicted to be active in cytoplasm and nucleus. Orthologous to human BIRC7 (baculoviral IAP repeat containing 7).

NR:

description
PREDICTED: baculoviral IAP repeat-containing protein 7 isoform X2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K16060 BIRC2_3; baculoviral IAP repeat-containing protein 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043224430.1 True 1532 mRNA 0.58 8 4920148 4927439
XM_043224431.1 False 1478 mRNA 0.58 7 4920148 4927439

Neighbor

gene id symbol gene type direction distance location
cacnb3a cacnb3a,LOC107724200,LOC107705735,LOC107696997,LOC107693548,LOC107601341 coding upstream 6275 4885196 ~ 4913873 (+)
lmod3 LOC107696957,LOC107723123,LOC107601344,LOC107705682,LOC107693543,LOC107594132 coding upstream 112151 4803448 ~ 4807997 (+)
zbtb46 zbtb46,LOC107697004,LOC107723124,LOC107601343,LOC107673369,LOC107594115,LOC107705739 coding upstream 119281 4730876 ~ 4800867 (+)
uckl1b uckl1b,uckl1,LOC107723126,LOC107697006,LOC108411658,LOC107673346,LOC107705741,LOC103372048 coding upstream 209811 4688893 ~ 4710337 (+)
znf512b si:dkey-256k13.2,LOC107601346,LOC107697007,LOC107723120,LOC107673337,LOC107705742,LOC107570867 coding upstream 233342 4641926 ~ 4686806 (+)
LOC122329057 lime1,LOC107705732,LOC107693551,LOC107696995,LOC107724179,LOC107594445,LOC107578907 coding downstream 54695 4982134 ~ 5028650 (+)
slc2a4rg LOC107724195,LOC107696993,LOC107705730,LOC107693552,LOC107594057 coding downstream 102319 5029758 ~ 5075572 (+)
exosc10 exosc10,LOC107724196,LOC107705727 coding downstream 156105 5083544 ~ 5093170 (+)
LOC122329193 tspan2b coding downstream 565519 5492958 ~ 5504339 (+)
LOC122329285 LOC107559159,LOC107696943,LOC107746529 coding downstream 721046 5648485 ~ 5652860 (+)
G154997 ddx23 non-coding upstream 5027 4864325 ~ 4915121 (+)
G154989 NA non-coding upstream 81716 4835993 ~ 4838432 (+)
G154972 NA non-coding upstream 103286 4771990 ~ 4816862 (+)
G154934 NA non-coding upstream 366980 4551033 ~ 4553168 (+)
G154837 NA non-coding upstream 614716 4249319 ~ 4305432 (+)
G155024 NA non-coding downstream 49230 4976669 ~ 4977310 (+)
G155032 NA non-coding downstream 169089 5096528 ~ 5097144 (+)
G155063 LOC107724188,LOC107696928,LOC107594416,LOC107693554,LOC107551524,LOC107705722 non-coding downstream 289497 5216936 ~ 5235951 (+)
G155078 NA non-coding downstream 469119 5396558 ~ 5397923 (+)
G155204 NA non-coding downstream 820930 5748369 ~ 5778495 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other upstream 84664 4817365 ~ 4835484 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 1223126 3694652 ~ 3697022 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 1823113 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 1910131 2995169 ~ 3010017 (+)
LOC122329169 NA other upstream 1976342 2925308 ~ 2943806 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 1665163 6592602 ~ 6598532 (+)
G155561 NA other downstream 2298555 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 2370921 7298360 ~ 7305534 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 3394266 8321705 ~ 8333376 (+)
G155799 NA other downstream 3560647 8488086 ~ 8488641 (+)

Expression


Co-expression Network