LOC122329223


Basic Information

Item Value
gene id LOC122329223
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10247911 ~ 10257228 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225414.1
TCAACAGGTGGTGATGGATCTTGTTATAAATACCGTCAGCACATGAACGTAACTTTACATAAGAAAACAAGATCTATCCACATCTATCCAATCTACCATGGTGGCGCAAAAGCTAAGCTGGATCACTTTGCTGCTGTTGCTGTGTCAGCATGCATGTTTCCTCTCTGCAAGAAGAGCAAAAACATCCCTGGTTTGTGAAGGAGGGTCTGCACACCTCAGCTGTGATGTGGGATACATACATGTCGTTTCTGCTAACTATGGGCGGACTGATCACAAAACGTGCTCTGTTGGAAGACCATTTAAGCAGCTCTCAAATAATCACTGCTTTGAAGAAACATCTCGCCGTACGATGACTGTTAGgtgtaatggaaaaaaaagatgttccGTTTTTGCAGTTAACTCTGTTTTCTCTGATCCTTGTCCTTGGACTTATAAATACTTGCAAGTGTCTTATGAGTGTCACCCACAGAGACACAGCATAGCTTGTGAAGGTACCAGAAGTGTCATTGGCTGTGagaAGGGTGTTATTTCTGTTCATCATGCCAATTATGGACGACGGGATCTTGGAATCTGCCTAATAGATTTGTGCGTGGAAAGACCTCTTGTCATGTCGATGCGTCAAATTCGGTGTTCTCTGACCCATGTCACCATGTCTATAATGCTGGTCTTCCTGTGTCAGTATGCTTTGGGATTGATAAAGGTGATTAAAGCCAACTACGGGCGGACTGATCGCACAACATGCGCAAGTGGGAAACCAGCTCATCAGACCTCAAACATACGCTGCGTTCGAGGATCATACCTCCGTACAATGTCCACTCGGTGTGATGGAAGAAAGAGCTGTTCTGTTCCAGCAGTGAACTCAGTTTTCTCTGATCCTTGTGTTGGCACTTTTAAATACCTGGAGGTGCATTACGTCTGTGTCAGaaaagATGCATTGCGAATAAACCAAATAAGTGCATCAGATTCTGTACTCCCTGATCCCGTCACGGCGTCTATATAGTACCTGGAAATGATGTAACTGTGTAGAATTTAGTGACTACTATGTCATGCAAATgtagtattgtgtgtgtgtgtgtgtaaaaaaggAAACAGATAATAACATTAtagataataaaatgtattttttaaatctcttttagACCCTCTGTAAGATATATCTGTTAGACACACTTATATTTGCATGAATGTGTAAAACTATAAGCTGTTGAACATTaaagtgcataaaaaataaaacaccatcCACTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225414.1 True 1247 mRNA 0.41 12 10247911 10257228

Neighbor

gene id symbol gene type direction distance location
taf8 taf8,LOC107723763,LOC107549030,LOC107756368,LOC107671856,LOC107594013,LOC107701755 coding upstream 4070 10240311 ~ 10243841 (+)
slc39a5 slc39a5,LOC107723731,LOC107549043,LOC107756408 coding upstream 30310 10212843 ~ 10217601 (+)
zgc:56699 zgc:56699,LOC107671838,LOC107756366,LOC107701712,LOC107549049 coding upstream 123700 10121748 ~ 10124211 (+)
cd63 LOC107723742,LOC107671882,LOC107572785,LOC107701749,LOC107756350,LOC107549048 coding upstream 130955 10108293 ~ 10116956 (+)
mylk2 LOC107671840,LOC107756349,LOC107701711,LOC105903258,LOC107572773,LOC107549024 coding upstream 141219 10099065 ~ 10106692 (+)
LOC122329250 si:dkey-261h17.1 coding downstream 58857 10316085 ~ 10322007 (+)
LOC122329277 ankrd52a,ankrd52,LOC107594018,LOC107756410,LOC107549041,LOC108432261,LOC107671831 coding downstream 111225 10368453 ~ 10381390 (+)
LOC122328600 pcmtd2,LOC107708816,LOC107570992,LOC107701717,LOC107756374,LOC107656550,LOC108433859 coding downstream 172049 10429277 ~ 10432503 (+)
LOC122329231 LOC107656551,LOC107708819,LOC107570956 coding downstream 190580 10447808 ~ 10449331 (+)
LOC122328734 sdcbp2,LOC107657068,LOC107672005 coding downstream 298048 10555276 ~ 10566657 (+)
G156182 grasp,LOC107671830,LOC107723769,LOC107594022,LOC107549045 non-coding upstream 83935 10161998 ~ 10163976 (+)
G156168 nr4a1,LOC107671891,LOC107723761,LOC107572787,LOC107756405,LOC107701750,LOC107549046 non-coding upstream 102450 10134855 ~ 10145461 (+)
G156142 NA non-coding upstream 253258 9994446 ~ 9994653 (+)
G156108 sgk1 non-coding upstream 324686 9922141 ~ 9923225 (+)
LOC122328703 NA non-coding upstream 359532 9885045 ~ 9888379 (+)
G156217 NA non-coding downstream 6762 10263990 ~ 10346054 (+)
G156169 NA non-coding downstream 129732 10386960 ~ 10387500 (+)
G156171 NA non-coding downstream 130640 10387868 ~ 10388626 (+)
G156387 LOC107747988,LOC107671949,LOC107707743,LOC107603135 non-coding downstream 262914 10520142 ~ 10520767 (+)
G156401 NA non-coding downstream 315986 10573214 ~ 10655710 (+)
plagx plagx,LOC107723745,LOC107572778,LOC107756402,LOC107671865,LOC107549050,LOC107701746 other upstream 158093 10070780 ~ 10089818 (+)
G156081 phip,LOC107656532,LOC107708770,LOC107549027 other upstream 478291 9683746 ~ 9769620 (+)
G155927 zgc:194189,LOC107570831,LOC107708788,LOC107681978,LOC107695725,LOC107586555,LOC107718823 other upstream 1125518 9120884 ~ 9122393 (+)
lzic lzic,LOC107708836,LOC107718820,LOC107681991,LOC107570802,LOC107695771,LOC107586557 other upstream 1146539 8941031 ~ 9101372 (+)
G155799 NA other upstream 1759270 8488086 ~ 8488641 (+)
LOC122328781 pifo other downstream 72623 10329851 ~ 10363818 (+)
LOC122328383 tbx15,tbx18,LOC107712261,LOC107708785,LOC107656541 other downstream 158435 10415663 ~ 10427162 (+)
LOC122328447 LOC107603155,LOC107707751,LOC107672009 other downstream 257751 10514979 ~ 10518751 (+)
LOC122329061 fkbp1ab,fkbp1a,LOC107707744,LOC107657066,LOC107747971,LOC108435222,LOC107559476,LOC100705189,LOC105013763,LOC101476936 other downstream 293869 10551097 ~ 10554720 (+)
G156399 LOC107707753,LOC107672006,LOC107603149 other downstream 306116 10563344 ~ 10572246 (+)

Expression


Co-expression Network