G16080


Basic Information

Item Value
gene id G16080
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 5871606 ~ 5871892 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17985
CTCGTCTTTCCTTCAGTGATTTTGCTTGTTAACAGGCTTGTTAATTCTAAGATGATTCTATAAATAATATATAAAGATTTTGTGGCTCAGATAAGGTCCAGTTCTGGTTTATTTCTTTTCCCTTGGCTGACACGTGGCATTGCTATGGCCTGCTTGTGGCTCAGATCTGGTAAACAGGAGCGCTCCGCCCAAGTGCCATCATTCCACGCCACATGTGGCCCAGATCATCATACCACTCTTGGCAGATGTGGGCCGGATTTGGGCCGGCACAAAGTTGCTATCTGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17985 True 287 lncRNA 0.27 1 5871606 5871892

Neighbor

gene id symbol gene type direction distance location
CI01000001_05861486_05864311 NA coding upstream 7002 5861445 ~ 5864604 (+)
CI01000001_05842665_05846705 KCTD6B, KCTD6, KCTD6A coding upstream 24682 5842665 ~ 5846924 (+)
CI01000001_05838017_05841551 ABHD6B coding upstream 29923 5838017 ~ 5841683 (+)
CI01000001_05814686_05836203 NA coding upstream 34368 5814646 ~ 5837238 (+)
CI01000001_05803416_05809184 SLMAPB coding upstream 62300 5803416 ~ 5809306 (+)
CI01000001_05883364_05897204 NA coding downstream 7683 5879575 ~ 5897214 (+)
CI01000001_05902661_05905496 NA coding downstream 30478 5902370 ~ 5905786 (+)
CI01000001_05933655_05938581 FLNA coding downstream 61763 5933655 ~ 5939241 (+)
CI01000001_05942155_05943721 NA coding downstream 70263 5942155 ~ 5944019 (+)
CI01000001_05960289_05963221 NA coding downstream 86457 5958349 ~ 5963343 (+)
G16071 NA non-coding upstream 85912 5785342 ~ 5785694 (+)
G16060 NA non-coding upstream 113200 5756362 ~ 5758406 (+)
G16027 NA non-coding upstream 162223 5709181 ~ 5709383 (+)
G16084 NA non-coding downstream 5141 5877033 ~ 5877272 (+)
G16090 NA non-coding downstream 13898 5885790 ~ 5886041 (+)
G16112 NA non-coding downstream 136347 6008239 ~ 6009382 (+)
G16131 NA non-coding downstream 185247 6057139 ~ 6057348 (+)
G16134 NA non-coding downstream 196716 6068608 ~ 6068868 (+)
G15995 NA other upstream 156655 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 581650 5279837 ~ 5287698 (+)
G15794 NA other upstream 806902 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2250155 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4200602 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 1660680 7531541 ~ 7540586 (+)
G17234 NA other downstream 2160232 8032124 ~ 8032483 (+)
G17353 NA other downstream 3344130 9216022 ~ 9228859 (+)
G17354 NA other downstream 3362571 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 3546436 9435836 ~ 9436373 (+)

Expression


Co-expression Network