G16134


Basic Information

Item Value
gene id G16134
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 6068608 ~ 6068868 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU18039
TCCCGAAATGTTCTGTACTAAATTTTCAATGAAAGAACAGTTTCCTCAGTCTCTGACTTTGATGGCTGCAACACACTCCAAAAGAGTTGGGACAGAGGCATGTTTACCACTGTGTCATGTCACATCATCTTTCCTTTTAATTACACTTTTTAATTGTTCGGGAACTGAGGATACTAATTGTTGAAGTTTTGCAAGAGAAATGTTTGCCAAATCTTGCCTGATACAAAACAGCTGCTCAACAGTCTGTGGTCATCATTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18039 True 261 lncRNA 0.39 1 6068608 6068868

Neighbor

gene id symbol gene type direction distance location
CI01000001_06040916_06041645 NA coding upstream 25998 6040916 ~ 6042610 (+)
CI01000001_05960289_05963221 NA coding upstream 105265 5958349 ~ 5963343 (+)
CI01000001_05942155_05943721 NA coding upstream 124589 5942155 ~ 5944019 (+)
CI01000001_05933655_05938581 FLNA coding upstream 129367 5933655 ~ 5939241 (+)
CI01000001_05902661_05905496 NA coding upstream 162822 5902370 ~ 5905786 (+)
CI01000001_06121398_06124748 TNNC1.L, TNNC1B, TNNC1, TNNC1A coding downstream 52530 6121398 ~ 6124952 (+)
CI01000001_06297032_06300530 TNNC2, TNNC2.L coding downstream 228164 6297032 ~ 6300660 (+)
CI01000001_06303405_06305351 TNNC2 coding downstream 234537 6303405 ~ 6305351 (+)
CI01000001_06309664_06321614 SLC35C2 coding downstream 240493 6309361 ~ 6322088 (+)
CI01000001_06325915_06358454 SLC35C2, COL20A1 coding downstream 256206 6325074 ~ 6358674 (+)
G16131 NA non-coding upstream 11260 6057139 ~ 6057348 (+)
G16112 NA non-coding upstream 59226 6008239 ~ 6009382 (+)
G16090 NA non-coding upstream 182567 5885790 ~ 5886041 (+)
G16084 NA non-coding upstream 191336 5877033 ~ 5877272 (+)
G16080 NA non-coding upstream 196716 5871606 ~ 5871892 (+)
G16141 NA non-coding downstream 13818 6082686 ~ 6083444 (+)
G16040 NA non-coding downstream 36841 6105709 ~ 6126465 (+)
G16163 NA non-coding downstream 69094 6137962 ~ 6138220 (+)
G16171 NA non-coding downstream 97824 6166692 ~ 6170565 (+)
G16172 NA non-coding downstream 107755 6176623 ~ 6177132 (+)
G15995 NA other upstream 353657 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 778652 5279837 ~ 5287698 (+)
G15794 NA other upstream 1003904 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2447157 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4397604 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 1463704 7531541 ~ 7540586 (+)
G17234 NA other downstream 1963256 8032124 ~ 8032483 (+)
G17353 NA other downstream 3147154 9216022 ~ 9228859 (+)
G17354 NA other downstream 3165595 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 3349460 9435836 ~ 9436373 (+)

Expression


Co-expression Network