G17245


Basic Information

Item Value
gene id G17245
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4987502 ~ 4991390 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU25737
TGTTGCAGCAGACATTTATTTGATGCACCTTTGTCacgtttaattaaattaacaatattattattaattatttactgcatatttaatgcattttcccGAGTGAAGGGACTGGGTTTGGATGACAAGCAtctgataaaaatgtttatttttttttattagtattaaaagAGACAGTATTAAAGTACATCGTTTAGTTCGTTATATTGATCAGCACcgtagaaataaaacaaaaatagcttttaaggAACAATTAGGAACCATTAAGACTTGTGCGTCgaaagctaaattaaaagtcTATTATTCAAGGGCAccttttgtaaacattttctccaaaaggtctttgcatttcttaaatatttctaataaaatagaACATTTCAATCTATTTACATCGGATcgttttaaaatgacaacatcTCATTCGCGGTCCAAAAACTGCATGTAATTAGCATCCTCTGCTATTACGGAAATTGAGCAGAGTCCGTTCAACGCACAGACGTCTCAAACCGACACTCACATGTGATAAACGTTTTTGTGATCGCATCCCTCCCAGTCGATGAGCTCCGAGCGATGAAACCAGAGGGAGATCTCCCGCTCCGCCCCCTCCACTGAATCGGATGCGTGGATGACATTTCTGAATGGATTCTGCTGATGTGAACGCTGAAGTCTCCTCTAATAGTTCCCGGAGCGGCTTCGGCGGGGTCCGTGTCTCCCACCAGTTTACGTGATGACCTCACTACATTATGCCCCTCCCCACCATGGCGACTATGGGGCCTGAGGTCATGTAGTAGAGCAGGCTGGAGTAGAAGGGTTTCCTCTGCAGTGAGACGTAATGCTGAGCTAAAAGCTTGTCAGAAgcctgaaaaacacacagaggtCTGTAGAAACGCGTCCCGTTCAGTCACGAGCGTCACCTGAGCGGATCACTCACCTGCAGCATCTTCAGGCCGACCAATCGGAATCCTCGCTGCTCGAAGCGCTTTATGATCTCGCCGATCAGACGCCTCTGAACGCCGTCGGGCTTCACGGCTACCAGAGTCCGTTCTCCGACGCCGGAAAAACTGAGTCACTGCTGAGGCTGCGCGCGAGTCCCAGTCCCAAAACGCGCGTGGAGCTCGCTCTGGCCGCTCGCGCGACGCGCACGCACAGCGCAAACCGCGCGGCcatcattttcatttcccaGGTCAGACGTGTCCGAAAACTTCACCGAGTGGCGCTTTCACCGCTCCAAAGCTTACGAGCGGCCCCCGACGCTTTTAACCCCCGGGACC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU25737 True 1271 lncRNA 0.42 4 4987502 4991390

Neighbor

gene id symbol gene type direction distance location
LOC122333749 LOC107559688 coding downstream 34538 4944126 ~ 4952964 (-)
LOC122342113 LOC107715646,LOC107550238,LOC107718628 coding downstream 46899 4937420 ~ 4940603 (-)
LOC122333724 hecw1b,hecw1,LOC107600217,LOC107662981,LOC108433086 coding downstream 144828 4831154 ~ 4842674 (-)
blvra blvra,LOC107599292,LOC107757787 coding downstream 160101 4821092 ~ 4827401 (-)
cactin LOC107662985,LOC107599251,LOC107698503,LOC107600224 coding downstream 194556 4786037 ~ 4792946 (-)
nfixb nfixb,nfix,LOC107718575,LOC107661654,LOC107715650,LOC107553634 coding upstream 501 4991891 ~ 5219560 (-)
zgc:158403 zgc:158403,LOC107695678,LOC107718630,LOC107661656,LOC107553678,LOC108441004,LOC108258290,LOC107550230 coding upstream 249966 5241356 ~ 5254160 (-)
tspan35 LOC107661802,LOC107718631,LOC107695679,LOC107550231,LOC107715631,LOC107579859 coding upstream 265675 5257065 ~ 5266273 (-)
znf653 znf653,LOC107715655,LOC107550246,LOC107718578 coding upstream 277541 5268931 ~ 5279929 (-)
epor LOC107718579,LOC107661786,LOC107715636,LOC107553679 coding upstream 291174 5282564 ~ 5288475 (-)
G17143 NA non-coding downstream 55665 4477307 ~ 4931837 (-)
G17223 NA non-coding downstream 79594 4902694 ~ 4907908 (-)
G17201 urgcp,LOC107662982,LOC107599277 non-coding downstream 175055 4802461 ~ 4812447 (-)
G17127 NA non-coding downstream 321087 4665824 ~ 4666415 (-)
G17154 NA non-coding downstream 375304 4609733 ~ 4612198 (-)
G17219 NA non-coding upstream 276237 5267627 ~ 5267828 (-)
G17263 NA non-coding upstream 319992 5311382 ~ 5312742 (-)
G17272 NA non-coding upstream 415567 5406957 ~ 5407435 (-)
G17274 NA non-coding upstream 417669 5409059 ~ 5468663 (-)
G17273 NA non-coding upstream 418296 5409686 ~ 5469076 (-)
LOC122342176 nfia,nfixb,LOC107592693,LOC107599440,LOC107715650 other downstream 100336 4843954 ~ 4887166 (-)
G17167 ep300,LOC107695656,LOC106511457 other downstream 307719 4678584 ~ 4679783 (-)
LOC122341034 NA other downstream 336860 4602551 ~ 4650642 (-)
G17133 trap1,LOC107573746 other downstream 534367 4450315 ~ 4453135 (-)
G17131 trap1 other downstream 538621 4447380 ~ 4448881 (-)
plppr2a plppr2a,LOC107715659,LOC107550254,LOC107695724,LOC107718583,LOC107661668,LOC108440982,LOC108274416 other upstream 355161 5346551 ~ 5388221 (-)
G17357 LOC107731470,LOC107659573,LOC107550263 other upstream 739982 5731372 ~ 5734483 (-)
G17457 jmjd8 other upstream 941504 5932894 ~ 6084545 (-)
G17468 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 other upstream 962758 5954148 ~ 6105990 (-)
LOC122333912 LOC107565605,LOC107653436,LOC107693566,LOC107599328,LOC107660297,LOC107673775,LOC107693569,LOC107693570,LOC107572241 other upstream 1324875 6316265 ~ 6343668 (-)

Expression


Co-expression Network