G17357 (LOC107731470,LOC107659573,LOC107550263)


Basic Information

Item Value
gene id G17357
gene name LOC107731470,LOC107659573,LOC107550263
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5731372 ~ 5734483 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU25919
TCCAGCTTAGCGCACGCTGATTTTCTCTCCAGAGCGGCAGAACAGTGGAAGTCTTGTCGCTGCGCTGaCCAACTGGAGCAGCATTCCTCTGCCACATATACACCAACACTGCCAAACTGAAGAACCACTTTGCAGCCATCatgCCCCCTCCTATTCGCCACCGCTCCATGCGCATCTTTGTGAACGACGACCGCCATGTGATGGCCAAACACTCTGCCATCTATCCCACCCAGGAGGAGCTGGAGGGGGTGCAGAACATGGTGTCCCACACCGAACGCGCCCTCAAGGCCGTCTCGGATTGGCTGGACGAGCAGGAGAAAGGAAATGCCAAAGTGAATTCCTTGGAGTCCGACGGAGATGGCGAGAAAGAGACTGAACCAAAGTTGTTGGAGCAGCCCACGCGGTCCCTGCGTGGAGTCATGCGTGTGGGGCTAGTCGCTAAAGGTCTCCTGCTAAAGGGGGATCTTGACCTGGAGCTCGTGCTGCTGTGCAAAGACAAACCCACCATCACGCTGTTAAAGAAAGTTTCGGAGAACCTCGCTGTGCAGCTTAAGCTCATCACGGAAGAAAAATACGACGTTAAGCCATGCATCCGCGACGCCACCATCGTCATCAAGAACTCTAAAGAGCCACCCT

Function

NR:

description
PREDICTED: interleukin enhancer-binding factor 3 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25919 True 636 TUCP 0.42 5 5731372 5734483

Neighbor

gene id symbol gene type direction distance location
LOC122333799 NA coding downstream 80827 5644026 ~ 5650545 (-)
ilf3b ilf3,LOC107659573,LOC107550263,LOC107653468 coding downstream 115924 5599420 ~ 5615448 (-)
farsa farsa coding downstream 132440 5592392 ~ 5598932 (-)
syce2 LOC107659571,LOC107550240,LOC107563245,LOC107653470 coding downstream 142772 5581021 ~ 5588600 (-)
zgc:63569 slc44a2,LOC107653473,LOC107659566,LOC107550258 coding downstream 180290 5534145 ~ 5551082 (-)
LOC122341448 LOC107550264,LOC107659563,LOC107718634,LOC107563254,LOC107653452,LOC107731471 coding upstream 785 5735268 ~ 5741169 (-)
wizb si:ch211-194b1.1,LOC107659574,LOC107731472,LOC107550265,LOC107718597,LOC107563237 coding upstream 46278 5780761 ~ 5797537 (-)
pglyrp6 LOC107731479,LOC107550266,LOC107659575,LOC107731473,LOC107659561 coding upstream 66802 5801285 ~ 5806054 (-)
hspbp1 hspbp1,LOC107653465,LOC107718622,LOC107579512,LOC107550267 coding upstream 74983 5809466 ~ 5816602 (-)
LOC122341460 NA coding upstream 87661 5822144 ~ 5827244 (-)
LOC122341476 NA non-coding downstream 14314 5694990 ~ 5717058 (-)
G17353 NA non-coding downstream 155309 5574631 ~ 5576063 (-)
G17367 NA non-coding downstream 157018 5573792 ~ 5574354 (-)
G17364 NA non-coding downstream 161103 5569444 ~ 5570269 (-)
G17355 LOC107653472 non-coding downstream 165407 5561906 ~ 5565965 (-)
G17458 LOC107661858,LOC107653464,LOC107718599,LOC107718623,LOC107753757,LOC107565613 non-coding upstream 193301 5927784 ~ 5928871 (-)
G17464 NA non-coding upstream 207123 5941606 ~ 6092292 (-)
G17474 NA non-coding upstream 225565 5960048 ~ 5960574 (-)
G17472 NA non-coding upstream 376126 6110609 ~ 6111289 (-)
LOC122341478 NA non-coding upstream 381254 6115737 ~ 6121637 (-)
plppr2a plppr2a,LOC107715659,LOC107550254,LOC107695724,LOC107718583,LOC107661668,LOC108440982,LOC108274416 other downstream 343151 5346551 ~ 5388221 (-)
LOC122342176 nfia,nfixb,LOC107592693,LOC107599440,LOC107715650 other downstream 844206 4843954 ~ 4887166 (-)
G17167 ep300,LOC107695656,LOC106511457 other downstream 1051589 4678584 ~ 4679783 (-)
LOC122341034 NA other downstream 1080730 4602551 ~ 4650642 (-)
G17133 trap1,LOC107573746 other downstream 1278237 4450315 ~ 4453135 (-)
G17457 jmjd8 other upstream 198411 5932894 ~ 6084545 (-)
G17468 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 other upstream 219665 5954148 ~ 6105990 (-)
LOC122333912 LOC107565605,LOC107653436,LOC107693566,LOC107599328,LOC107660297,LOC107673775,LOC107693569,LOC107693570,LOC107572241 other upstream 581782 6316265 ~ 6343668 (-)
LOC122333927 LOC107599328,LOC107661850,LOC107602703,LOC107711190,LOC107599331,LOC107693566,LOC107722885,LOC107565605,LOC107673775,LOC107563216,LOC107599329,LOC107653436 other upstream 659564 6394047 ~ 6424285 (-)
LOC122341483 LOC107661847,LOC107711201,LOC107728682,LOC107670454,LOC107599341,LOC100536643,LOC107602685 other upstream 873469 6607952 ~ 6614322 (-)

Expression


Co-expression Network