RNA id: TU25919



Basic Information


Item Value
RNA id TU25919
length 636
RNA type TUCP
GC content 0.42
exon number 5
gene id G17357
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5731372 ~ 5734483 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCAGCTTAGCGCACGCTGATTTTCTCTCCAGAGCGGCAGAACAGTGGAAGTCTTGTCGCTGCGCTGaCCAACTGGAGCAGCATTCCTCTGCCACATATACACCAACACTGCCAAACTGAAGAACCACTTTGCAGCCATCatgCCCCCTCCTATTCGCCACCGCTCCATGCGCATCTTTGTGAACGACGACCGCCATGTGATGGCCAAACACTCTGCCATCTATCCCACCCAGGAGGAGCTGGAGGGGGTGCAGAACATGGTGTCCCACACCGAACGCGCCCTCAAGGCCGTCTCGGATTGGCTGGACGAGCAGGAGAAAGGAAATGCCAAAGTGAATTCCTTGGAGTCCGACGGAGATGGCGAGAAAGAGACTGAACCAAAGTTGTTGGAGCAGCCCACGCGGTCCCTGCGTGGAGTCATGCGTGTGGGGCTAGTCGCTAAAGGTCTCCTGCTAAAGGGGGATCTTGACCTGGAGCTCGTGCTGCTGTGCAAAGACAAACCCACCATCACGCTGTTAAAGAAAGTTTCGGAGAACCTCGCTGTGCAGCTTAAGCTCATCACGGAAGAAAAATACGACGTTAAGCCATGCATCCGCGACGCCACCATCGTCATCAAGAACTCTAAAGAGCCACCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250465.1 lncRNA downstream 14314 5694990 ~ 5717058 (-) True LOC122341476
TU25914 lncRNA downstream 155309 5574631 ~ 5576063 (-) True G17353
TU25936 lncRNA downstream 157018 5573792 ~ 5574354 (-) True G17367
TU25933 lncRNA downstream 161103 5569444 ~ 5570269 (-) True G17364
TU25917 lncRNA downstream 165407 5561906 ~ 5565965 (-) True G17355
TU26078 lncRNA upstream 193301 5927784 ~ 5928871 (-) True G17458
TU26087 lncRNA upstream 207123 5941606 ~ 6092292 (-) True G17464
TU26112 lncRNA upstream 225565 5960048 ~ 5960574 (-) True G17474
TU26098 lncRNA upstream 369078 6103561 ~ 6105990 (-) True G17468
TU26108 lncRNA upstream 376126 6110609 ~ 6111289 (-) True G17472
XM_043231595.1 mRNA downstream 80827 5644026 ~ 5650545 (-) True LOC122333799
XM_043234796.1 mRNA downstream 115924 5599420 ~ 5615448 (-) False ilf3b
XM_043234797.1 mRNA downstream 115924 5599420 ~ 5615448 (-) False ilf3b
XM_043234795.1 mRNA downstream 115924 5599420 ~ 5615448 (-) True ilf3b
XM_043234799.1 mRNA downstream 115924 5602210 ~ 5615448 (-) False ilf3b
XM_043234835.1 mRNA upstream 785 5735268 ~ 5741169 (-) False LOC122341448
XM_043234836.1 mRNA upstream 785 5735268 ~ 5740362 (-) True LOC122341448
XM_043234834.1 mRNA upstream 785 5735268 ~ 5740361 (-) False LOC122341448
XM_043234864.1 mRNA upstream 46278 5780761 ~ 5797537 (-) True wizb
XM_043234820.1 mRNA upstream 66802 5801285 ~ 5806054 (-) True pglyrp6
XR_006248739.1 other downstream 353151 5346551 ~ 5378221 (-) True plppr2a
TU25683 other downstream 849043 4865363 ~ 4882329 (-) False LOC122342176
TU25669 other downstream 882455 4844080 ~ 4848917 (-) False LOC122342176
TU25607 other downstream 1051589 4678584 ~ 4679783 (-) True G17167
XR_006250404.1 other downstream 1125807 4603750 ~ 4605565 (-) False LOC122341034
TU26077 other upstream 198411 5932894 ~ 6084545 (-) True G17457
TU26094 other upstream 219665 5954148 ~ 6105990 (-) False G17468
TU26095 other upstream 368631 6103114 ~ 6105990 (-) False G17468
TU26099 other upstream 368631 6103114 ~ 6105990 (-) False G17468
TU26334 other upstream 884770 6619253 ~ 6625296 (-) False crb3a

Expression Profile