G17472


Basic Information

Item Value
gene id G17472
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6110609 ~ 6111289 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU26108
tcaatatatcaatTAGGTCAAAACGCTTGATTTGCACACTTACTACAGCTGAGCAAATGTTATCGCAGCACATGCCCTTGACCGCCGCTTTCAGTCAAACTgctaaatactgtataaatctCTACAGTTTCtcactgtaattaaataaactgtttatgcACGCCAGGCCAAGAGAAGTAAATCAAGTCTGTTGTGAAGAACAGAAATGGAGTGGATCAGGGGACTGCTGGATTGCAGAGAGTGAGACACGACTGCCCCTTGCTGGCCTTAAAGCGACAGAACGATAATGTTTTTACAGATGAAAACGtgcattgtgttttaatttaaattcattcgATTCATTCCTGCCCATGCATTTTAACTAGCTACATAACAGTAATGTAAATTATGAGTAAATGTACCATACatagatacatttaaattgaaaaaaagttttaaaggtgtgtgtgtatatatatttttttgtgctgtcaaacagtaatcgcaattaatcgcatcaaagtattttgtttgcatgtgttttctgtgtacatttattatctatatatgtaaatgcacaaacatacagtatataacttGAACATACATGTCtaaatttatattagaaatatattttatatatttatcatcacacatataatgtaaataaaaacatttttatgcaattaatcaGGTTTTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26108 True 681 lncRNA 0.38 1 6110609 6111289

Neighbor

gene id symbol gene type direction distance location
gng14 si:dkey-117i10.1,LOC107753760,LOC107661874,LOC107565612 coding downstream 4688 6103281 ~ 6105921 (-)
LOC122341471 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 coding downstream 153855 5954659 ~ 5956754 (-)
LOC122341456 LOC107661884,LOC107753766,LOC107565624,LOC107718602 coding downstream 162780 5946213 ~ 5947829 (-)
LOC122341454 LOC107661882,LOC107565623,LOC107753768,LOC107653448,LOC107563234,LOC107735774 coding downstream 165969 5943440 ~ 5944640 (-)
jmjd8 jmjd8 coding downstream 174035 5933804 ~ 5936574 (-)
LOC122341449 LOC107753764,LOC107718604,LOC107653462,LOC107661878,LOC107563221 coding upstream 25523 6136812 ~ 6160625 (-)
sun1b sun1,LOC107565618,LOC107718608,LOC107653461,LOC107563232,LOC107661856 coding upstream 51607 6162896 ~ 6186363 (-)
dnaaf5 LOC107753762,LOC107661854,LOC107718606,LOC107653459,LOC107565615,LOC107563231 coding upstream 83741 6195030 ~ 6211803 (-)
kcnj2b kcnj2b,LOC107661877,LOC107565614,LOC107718639,LOC107653444,LOC107563240,LOC105894957 coding upstream 202116 6313405 ~ 6314727 (-)
LOC122341427 LOC107602703,LOC107661850,LOC107599331,LOC107693566,LOC107653436,LOC107572241,LOC107722887,LOC107565605,LOC107661873 coding upstream 233752 6345041 ~ 6374040 (-)
G17464 NA non-coding downstream 18317 5941606 ~ 6092292 (-)
G17474 NA non-coding downstream 150035 5960048 ~ 5960574 (-)
G17458 LOC107661858,LOC107653464,LOC107718599,LOC107718623,LOC107753757,LOC107565613 non-coding downstream 181738 5927784 ~ 5928871 (-)
LOC122341476 NA non-coding downstream 393551 5694990 ~ 5717058 (-)
G17353 NA non-coding downstream 534546 5574631 ~ 5576063 (-)
LOC122341478 NA non-coding upstream 4448 6115737 ~ 6121637 (-)
G17487 NA non-coding upstream 68029 6179318 ~ 6187775 (-)
G17496 NA non-coding upstream 139787 6251076 ~ 6265328 (-)
G17516 NA non-coding upstream 189441 6300730 ~ 6301370 (-)
G17580 LOC107661876,LOC107602705,LOC107711171 non-coding upstream 336497 6447786 ~ 6449752 (-)
G17468 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 other downstream 4619 5954148 ~ 6105990 (-)
G17457 jmjd8 other downstream 26064 5932894 ~ 6084545 (-)
G17357 LOC107731470,LOC107659573,LOC107550263 other downstream 376126 5731372 ~ 5734483 (-)
plppr2a plppr2a,LOC107715659,LOC107550254,LOC107695724,LOC107718583,LOC107661668,LOC108440982,LOC108274416 other downstream 722388 5346551 ~ 5388221 (-)
LOC122342176 nfia,nfixb,LOC107592693,LOC107599440,LOC107715650 other downstream 1223443 4843954 ~ 4887166 (-)
LOC122333912 LOC107565605,LOC107653436,LOC107693566,LOC107599328,LOC107660297,LOC107673775,LOC107693569,LOC107693570,LOC107572241 other upstream 204976 6316265 ~ 6343668 (-)
LOC122333927 LOC107599328,LOC107661850,LOC107602703,LOC107711190,LOC107599331,LOC107693566,LOC107722885,LOC107565605,LOC107673775,LOC107563216,LOC107599329,LOC107653436 other upstream 282758 6394047 ~ 6424285 (-)
LOC122341483 LOC107661847,LOC107711201,LOC107728682,LOC107670454,LOC107599341,LOC100536643,LOC107602685 other upstream 496663 6607952 ~ 6614322 (-)
crb3a crb3,crb3a,LOC107599343,LOC107602711 other upstream 507928 6619217 ~ 6625531 (-)
LOC122341856 LOC107711206,LOC107602719,LOC107661829,LOC107711209,LOC107711210,LOC107661830,LOC107599345,LOC107602722,LOC107728674 other upstream 591214 6702503 ~ 6709381 (-)

Expression


Co-expression Network