LOC122341456 (LOC107661884,LOC107753766,LOC107565624,LOC107718602)


Basic Information

Item Value
gene id LOC122341456
gene name LOC107661884,LOC107753766,LOC107565624,LOC107718602
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5946213 ~ 5947829 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234844.1
GCAAACCAGGGCCGGTCTACGGAGGTGCTGCTGATAAGGTAATGAGTAATGAGAGGATGTGGCCACTCCCTGGACCGCTTACGTTCTGGGTGAGGTTACTATGTGCAGACTAACCTGGAGTCCATACGGACGACGACCGGGCTTAGAAAGCGACCTCAAATCATTTTCTGGAATATGACCAAGAGACGTCAATGAGAAGACAACACTTTGAAGGCGTCAAATCATCAATTTAAGCGAGGTTTAAGGAGCGCCTAATCATGGTAACCTTGAACACTCAGTCTCTCACCGTGCCGGTGGGGATAATCCGGCTCTTTGAGTTTGCACTAACGCTCATTACCTTCAGCCTGGTGGCTTCTGAAGGCCACAATGGCTCTTCGTTCTGGGCCTGGTGCATGTTCACCTGGTGCTTCTGCTGTTTCATGACCCTCCTCGTCATTACCCTGGAGTTCACCAGCCTCAACGGCAAGCTGCCCATCTCTTGGGACGACTTTACGACGGCTTTCGCGATGCTGTCCACGCTGATGCTGCTGGCCGCTTCGGTCATCTACCCCACTTTCTTCGTACACTCCTCGCAGCCGGTCAGGATCGCGGCCACGGTCACGTCCTGCGTCGGCTTCAGCCTGTATTCAGCCGAGGTGGGACTGACCCGGGCCAGACCCGGGGAGATCAGCGGGTTCCTGTCCACCGTGCCGGGCCTGCTGAAGGTCCTGGAGGCGTTTGTGGCCTGCATCATCTTCATCTCTCTGAATTCGAACATTTACAGCAGGTCCCCCGGGCTCCAGTGGTGCGTGGCCGTCTACTCCATCTGCTTCATCGTGGCactcctcatcatcatcctcaccaTCGGCAGGTTGCTGTCTCGGATACCCTTCCCGCTGGACAAATGCCTGACGGGGTACAACATACTGGCGGTTTTAATGTACCTCACGGCTGTGGTGATTTGGCCTTTCTACAGCTTCCGGCGCAATCCGAGACCACCAACCTGCAATCACTGTTTCTGGGACAGCCTGGTTGTCGTGTCCTGCATGACTTGCATCAATTTGATCGTCTACATCGTGGATACGGTTTACTCGGTGCGTTTGGTGTTTATTTCACCTGCCTAGAAAACAGAACTTGATCAAGTGCTTGAGATGTTCCTCGTTTGTAAGCtttgaaatgtcaaatttaCTGAAAGCTTAACCAGGCAACAGCTCGGACGAGAAGCACGGTTGTTATATAGGGAGTTTTAAATATActtgacattaataaaaaaataataatcctgAAGAAAGTTGACTTTTTAAggattattacaaatattttggatgacaaatatgtaataatcatttaattatgtgtgtgtatatgtgcattGTATGttacatatgtgaccctggagcacaaaaaaaaaccaaaaaacgtTGATGTGTGTAATTGTATGGCtcaaaatgatctatttttctttcatgccagaAATAATtgagtaaagatcatgttctacattttgtgattttcataaaaaaatatatatacataaaaaaatttgtaaattgtaaactTATCAAAACTTTGTCTTTgatcagtaatatgcatttgctaagaacttcatttggacaaatttaaaggcaattttcttaa

Function

NR:

description
PREDICTED: myeloid-associated differentiation marker homolog

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234844.1 True 1617 mRNA 0.46 1 5946213 5947829

Neighbor

gene id symbol gene type direction distance location
LOC122341454 LOC107661882,LOC107565623,LOC107753768,LOC107653448,LOC107563234,LOC107735774 coding downstream 1573 5943440 ~ 5944640 (-)
jmjd8 jmjd8 coding downstream 9639 5933804 ~ 5936574 (-)
nog5 nog5,LOC107580985,LOC107718637,LOC107653441 coding downstream 25182 5919553 ~ 5921031 (-)
LOC122341460 NA coding downstream 118969 5822144 ~ 5827244 (-)
hspbp1 hspbp1,LOC107653465,LOC107718622,LOC107579512,LOC107550267 coding downstream 129611 5809466 ~ 5816602 (-)
LOC122341471 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 coding upstream 6830 5954659 ~ 5956754 (-)
gng14 si:dkey-117i10.1,LOC107753760,LOC107661874,LOC107565612 coding upstream 155452 6103281 ~ 6105921 (-)
LOC122341449 LOC107753764,LOC107718604,LOC107653462,LOC107661878,LOC107563221 coding upstream 188983 6136812 ~ 6160625 (-)
sun1b sun1,LOC107565618,LOC107718608,LOC107653461,LOC107563232,LOC107661856 coding upstream 215067 6162896 ~ 6186363 (-)
dnaaf5 LOC107753762,LOC107661854,LOC107718606,LOC107653459,LOC107565615,LOC107563231 coding upstream 247201 6195030 ~ 6211803 (-)
G17458 LOC107661858,LOC107653464,LOC107718599,LOC107718623,LOC107753757,LOC107565613 non-coding downstream 17342 5927784 ~ 5928871 (-)
LOC122341476 NA non-coding downstream 229155 5694990 ~ 5717058 (-)
G17353 NA non-coding downstream 370150 5574631 ~ 5576063 (-)
G17367 NA non-coding downstream 371859 5573792 ~ 5574354 (-)
G17364 NA non-coding downstream 375944 5569444 ~ 5570269 (-)
G17474 NA non-coding upstream 12219 5960048 ~ 5960574 (-)
G17472 NA non-coding upstream 162780 6110609 ~ 6111289 (-)
LOC122341478 NA non-coding upstream 167908 6115737 ~ 6121637 (-)
G17487 NA non-coding upstream 231489 6179318 ~ 6187775 (-)
G17496 NA non-coding upstream 303247 6251076 ~ 6265328 (-)
G17357 LOC107731470,LOC107659573,LOC107550263 other downstream 211730 5731372 ~ 5734483 (-)
plppr2a plppr2a,LOC107715659,LOC107550254,LOC107695724,LOC107718583,LOC107661668,LOC108440982,LOC108274416 other downstream 557992 5346551 ~ 5388221 (-)
LOC122342176 nfia,nfixb,LOC107592693,LOC107599440,LOC107715650 other downstream 1059047 4843954 ~ 4887166 (-)
G17167 ep300,LOC107695656,LOC106511457 other downstream 1266430 4678584 ~ 4679783 (-)
LOC122341034 NA other downstream 1295571 4602551 ~ 4650642 (-)
G17468 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 other upstream 6319 5954148 ~ 6105990 (-)
LOC122333912 LOC107565605,LOC107653436,LOC107693566,LOC107599328,LOC107660297,LOC107673775,LOC107693569,LOC107693570,LOC107572241 other upstream 368436 6316265 ~ 6343668 (-)
LOC122333927 LOC107599328,LOC107661850,LOC107602703,LOC107711190,LOC107599331,LOC107693566,LOC107722885,LOC107565605,LOC107673775,LOC107563216,LOC107599329,LOC107653436 other upstream 446218 6394047 ~ 6424285 (-)
LOC122341483 LOC107661847,LOC107711201,LOC107728682,LOC107670454,LOC107599341,LOC100536643,LOC107602685 other upstream 660123 6607952 ~ 6614322 (-)
crb3a crb3,crb3a,LOC107599343,LOC107602711 other upstream 671388 6619217 ~ 6625531 (-)

Expression


Co-expression Network