jmjd8 (jmjd8)


Basic Information

Item Value
gene id jmjd8
gene name jmjd8
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5933804 ~ 5936574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234845.1
AGCAGGAAGTGAGGGTCGTGGGATTTTGAAAGCTGTTGGTGGTGAAACGCGGTGAAACCGTGATGAGTGTGAGTTTTAATGACAGGTGTTGAAGAAACATGGATCAGCTTGTGAGGGCTCTGCTAATGCTCCTCTTAGCGCACTTACCGGCTTCATTTCACTGTACAGCTGCGCTCAGCGGAGATGATGGAGGATGGGCACTGGGTTCAAGTATAGAGGATGAAGGCGAGTGCAGCATTGAGATAAGAGACGTGAActccataacacacacacaattcattAAAGAGTATGCTTATGCAAAACCAGTTATACTCCGAGGACTTACAGATAACGCGAAGTTCCGTTTCCTGTGTTCCAAGTCCAATCTGCTGCGAGAGTACGGAGGGAACACGGTCCGTCTCAGCACAGCcaatacacactcatacaggAAAGTGGATGTGCTGTTTGAAGAGTTTGTGAAGTTCCTGTTGACCCCTCAGCCTAAAGACACACTGGGCAGTGatactCTGTACTTCTTTGGGGACAATAACTTCACGGAGTGGCATTCTCTGTTTGAGGAGTATAAAGCGCCACCTTTTTCTCTTCCACTCATGCATCCTGCCTATAGCTTTGGGATTGCCGGACCAGGTACTGGCGTCCCGTTTCACTGGCACGGTCCCGGCTACTCTGAAGTTGTTTATGGCAGAAAGCGATGGTTTCTTTACCCCCCTGATGAGGCGCCCGAGTTCCATCCCAACCACACCACTCTCTCCTGGGTCTCTCTGTCCTACCCAAACCTGGAGCTCCACCAGAGGCCCCTGGAGTGCACCATACGCCCCGGAGAGGTGCTGTATTTTCCAGATCGTTGGTGGCATGCCACTCTAAATCTGGACGCCAGCGTCTTCATTTCGACTTTTCTGGGGTGAAGACTGACGTGGTGGACACACACCGAGTGCGATTGCGAGCAAGGATTCAATGTTCAGAGGaccaaatgtgaccctggagcagaAAACCAGACATAAGTAGCACGGGTATATTTGAAGCAATGgccaaaaaatacattgtatgggtcaaaattattgtgatgttaaaCATCGTGTTCcatgatatttaaatttttgctcAGTAATATGCACTGCTATAGACTtcttagtgattttttta

Function

symbol description
jmjd8 Orthologous to human JMJD8 (jumonji domain containing 8).

NR:

description
PREDICTED: jmjC domain-containing protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234845.1 True 1143 mRNA 0.48 9 5933804 5936574

Neighbor

gene id symbol gene type direction distance location
nog5 nog5,LOC107580985,LOC107718637,LOC107653441 coding downstream 12773 5919553 ~ 5921031 (-)
LOC122341460 NA coding downstream 106560 5822144 ~ 5827244 (-)
hspbp1 hspbp1,LOC107653465,LOC107718622,LOC107579512,LOC107550267 coding downstream 117202 5809466 ~ 5816602 (-)
pglyrp6 LOC107731479,LOC107550266,LOC107659575,LOC107731473,LOC107659561 coding downstream 127750 5801285 ~ 5806054 (-)
wizb si:ch211-194b1.1,LOC107659574,LOC107731472,LOC107550265,LOC107718597,LOC107563237 coding downstream 136267 5780761 ~ 5797537 (-)
LOC122341454 LOC107661882,LOC107565623,LOC107753768,LOC107653448,LOC107563234,LOC107735774 coding upstream 6866 5943440 ~ 5944640 (-)
LOC122341456 LOC107661884,LOC107753766,LOC107565624,LOC107718602 coding upstream 9639 5946213 ~ 5947829 (-)
LOC122341471 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 coding upstream 18085 5954659 ~ 5956754 (-)
gng14 si:dkey-117i10.1,LOC107753760,LOC107661874,LOC107565612 coding upstream 166707 6103281 ~ 6105921 (-)
LOC122341449 LOC107753764,LOC107718604,LOC107653462,LOC107661878,LOC107563221 coding upstream 200238 6136812 ~ 6160625 (-)
G17458 LOC107661858,LOC107653464,LOC107718599,LOC107718623,LOC107753757,LOC107565613 non-coding downstream 4933 5927784 ~ 5928871 (-)
LOC122341476 NA non-coding downstream 216746 5694990 ~ 5717058 (-)
G17353 NA non-coding downstream 357741 5574631 ~ 5576063 (-)
G17367 NA non-coding downstream 359450 5573792 ~ 5574354 (-)
G17364 NA non-coding downstream 363535 5569444 ~ 5570269 (-)
G17464 NA non-coding upstream 5032 5941606 ~ 6092292 (-)
G17474 NA non-coding upstream 23474 5960048 ~ 5960574 (-)
G17472 NA non-coding upstream 174035 6110609 ~ 6111289 (-)
LOC122341478 NA non-coding upstream 179163 6115737 ~ 6121637 (-)
G17487 NA non-coding upstream 242744 6179318 ~ 6187775 (-)
G17357 LOC107731470,LOC107659573,LOC107550263 other downstream 199321 5731372 ~ 5734483 (-)
plppr2a plppr2a,LOC107715659,LOC107550254,LOC107695724,LOC107718583,LOC107661668,LOC108440982,LOC108274416 other downstream 545583 5346551 ~ 5388221 (-)
LOC122342176 nfia,nfixb,LOC107592693,LOC107599440,LOC107715650 other downstream 1046638 4843954 ~ 4887166 (-)
G17167 ep300,LOC107695656,LOC106511457 other downstream 1254021 4678584 ~ 4679783 (-)
LOC122341034 NA other downstream 1283162 4602551 ~ 4650642 (-)
G17468 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 other upstream 17574 5954148 ~ 6105990 (-)
LOC122333912 LOC107565605,LOC107653436,LOC107693566,LOC107599328,LOC107660297,LOC107673775,LOC107693569,LOC107693570,LOC107572241 other upstream 379691 6316265 ~ 6343668 (-)
LOC122333927 LOC107599328,LOC107661850,LOC107602703,LOC107711190,LOC107599331,LOC107693566,LOC107722885,LOC107565605,LOC107673775,LOC107563216,LOC107599329,LOC107653436 other upstream 457473 6394047 ~ 6424285 (-)
LOC122341483 LOC107661847,LOC107711201,LOC107728682,LOC107670454,LOC107599341,LOC100536643,LOC107602685 other upstream 671378 6607952 ~ 6614322 (-)
crb3a crb3,crb3a,LOC107599343,LOC107602711 other upstream 682643 6619217 ~ 6625531 (-)

Expression


Co-expression Network