G17272


Basic Information

Item Value
gene id G17272
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 5406957 ~ 5407435 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU25792
atttactttaacttTACAAAATATTGCCATAGAGCATAATccttacttaatatcctaatgacatttgccaaaaaaaaaaaaatcaacaattttaacccaacttttttttggtccatGGTCACATACATTATATGGTACATCCTTAACCTGTCTGCATGAATACAATACACCCACATACAGCAATTATATTAAATCTCGGCTGCATGACTGTTTATATATCAtaccaaaatgtaaattattattacacagcTCTATAAAGTTggatatataatgtaatgtataattcGCATACATATGTACAAATTTGGTTAAATGTAACTATATAATTCCTCTTTATATGGACTATATGAAATGAACAGCTTTACAGCTCTTGCTCTAATCTGATAAATCCCACAATAAGGTATTAAGATATTAAGGGTTCATTTCTGTACAGCTGTATTGTAAAAGGTGCTATGCAAACGATGTCTATAGAAAAAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25792 True 479 lncRNA 0.39 1 5406957 5407435

Neighbor

gene id symbol gene type direction distance location
LOC122334247 LOC107576129,LOC107550232 coding downstream 9091 5388396 ~ 5397866 (-)
tlcd4b tmem56b,LOC107661664,LOC107695723,LOC107715658,LOC107718582,LOC107550253 coding downstream 61581 5327851 ~ 5345376 (-)
cnn1b cnn1b,cnn1,LOC107715638,LOC107718633 coding downstream 79245 5313977 ~ 5327712 (-)
tmem205 tmem205,LOC107715656,LOC107550249,LOC107718580,LOC107577964,LOC107683028 coding downstream 97205 5306821 ~ 5309752 (-)
rab3db rab3db,LOC107715637,LOC107695682,LOC107718632,LOC107661661,LOC107550248,LOC108440987 coding downstream 100821 5292619 ~ 5306136 (-)
LOC122341970 rgl3,LOC107659568,LOC107718589,LOC107550259,LOC107653475,LOC107711125,LOC107563227 coding upstream 108114 5515549 ~ 5531303 (-)
zgc:63569 slc44a2,LOC107653473,LOC107659566,LOC107550258 coding upstream 126710 5534145 ~ 5551082 (-)
syce2 LOC107659571,LOC107550240,LOC107563245,LOC107653470 coding upstream 173586 5581021 ~ 5588600 (-)
farsa farsa coding upstream 184957 5592392 ~ 5598932 (-)
ilf3b ilf3,LOC107659573,LOC107550263,LOC107653468 coding upstream 191985 5599420 ~ 5615448 (-)
G17263 NA non-coding downstream 94215 5311382 ~ 5312742 (-)
G17219 NA non-coding downstream 139129 5267627 ~ 5267828 (-)
G17245 NA non-coding downstream 415567 4987502 ~ 4991390 (-)
G17223 NA non-coding downstream 499049 4902694 ~ 4907908 (-)
G17201 urgcp,LOC107662982,LOC107599277 non-coding downstream 594510 4802461 ~ 4812447 (-)
G17274 NA non-coding upstream 1624 5409059 ~ 5468663 (-)
G17273 NA non-coding upstream 2251 5409686 ~ 5469076 (-)
G17268 NA non-coding upstream 8342 5415777 ~ 5474774 (-)
G17266 LOC107659565,LOC107550255,LOC107711126,LOC107718587,LOC107563256,LOC107656794 non-coding upstream 13574 5421009 ~ 5484150 (-)
LOC122342121 NA non-coding upstream 48089 5455524 ~ 5456267 (-)
plppr2a plppr2a,LOC107715659,LOC107550254,LOC107695724,LOC107718583,LOC107661668,LOC108440982,LOC108274416 other downstream 18736 5346551 ~ 5388221 (-)
LOC122342176 nfia,nfixb,LOC107592693,LOC107599440,LOC107715650 other downstream 519791 4843954 ~ 4887166 (-)
G17167 ep300,LOC107695656,LOC106511457 other downstream 727174 4678584 ~ 4679783 (-)
LOC122341034 NA other downstream 756315 4602551 ~ 4650642 (-)
G17133 trap1,LOC107573746 other downstream 953822 4450315 ~ 4453135 (-)
G17357 LOC107731470,LOC107659573,LOC107550263 other upstream 323937 5731372 ~ 5734483 (-)
G17457 jmjd8 other upstream 525459 5932894 ~ 6084545 (-)
G17468 si:dkey-117i10.1,LOC107753760,LOC107565612,LOC107661874 other upstream 546713 5954148 ~ 6105990 (-)
LOC122333912 LOC107565605,LOC107653436,LOC107693566,LOC107599328,LOC107660297,LOC107673775,LOC107693569,LOC107693570,LOC107572241 other upstream 908830 6316265 ~ 6343668 (-)
LOC122333927 LOC107599328,LOC107661850,LOC107602703,LOC107711190,LOC107599331,LOC107693566,LOC107722885,LOC107565605,LOC107673775,LOC107563216,LOC107599329,LOC107653436 other upstream 986612 6394047 ~ 6424285 (-)

Expression


Co-expression Network