G18638 (LOC107703356,LOC107674672,LOC107754020,LOC107596819)


Basic Information

Item Value
gene id G18638
gene name LOC107703356,LOC107674672,LOC107754020,LOC107596819
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9901531 ~ 9908617 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU27812
TCCCCAtcgaaaaggaaaaaaaggccGTCACAAGGAAAACACTGAGAttcatatcttttattttttctggcatgtaaagtacaaataattaaacaattccATGAAAAAGTCCTCAAGCGTCTTCAGCTGAAATCCCAGTAATAAATATCCTAAACTAAActgaaaggtttatttatttttttcccctttatgtgtttgtctttgtttgttcatgtttggAAGTATGAGATTTTTCTTTCGTGACACACAGACACTGAGATCAGGAGTTCtgcttttgatctttttttttattattattcgtaTTATTCTCGTTATTGTtcgtttgttttgttctgttattGTTCTGTTATTCCTGGAAAATGGTTTCAGAAGAACGTTGCTAAGTAACTCTGTGTCCCTCCTAAATTAACTGACACAAAATACAACTGGTTGAGAAACAGAGTGACCACTGACCCCTTTATCTATCTCAGCGCCTCGCCTGGCCCCGTCTCCCCCGCTGCGCTTTCTTCGCCCACGTCTGCTAATCGTTGCTCTCGAGCCCTCCCACtgactctttttattttctagagAGCTCTCTCGGTCTGGTTTGGCGGCTGTAAGGCAGCGGGTGAGAGGTTTTTGGCGAGGGACGCTGAGCCTAAGGCCTGGCTGCGGGTCCGAACTGTAGACCGGACCACCGCCTCGGCCCGCCCCCCCCCGGCCCCAGGCCTCGCCCCGGGCCCTGACTCGCTATGGGGTTCTGAACGTGGTTGGAAAAACAAGACTGTGATTagattaaataatcaaaaggttttcatttaacaagacaaacaaaacacaggCATTAAAGGCATAACATCTAGCACACAGCATGTATGTTTATACACTTCAATTAGTTTAATATAGCAGTGCATTCTTTGCCTATGGAGAACTTTTCCAAATTGTAATtctaaagcagtttttttttctgttttgttttttttttttttttttaaatctatttgttCCCTTTAAAGAAAAACGAAAAAGGTGTAACCACATTTTGGCAAAATGAAAAGTATTTAAACTTgcaaatataatgaaataaaccataaatatacacaaaacatactttcatacgaggcaataataataataatcataataatgataataaatagtttttaagttAACAATAAGTTAAAACTACAAGCTTAAAGTCGCCCAAATAATACAAGTTCATTGGCgctatattgatttttttttttttcagtttaaattatttatgttgCAACAAAAGCTACCACAGACTTTTacaaacacaattaaacacattttgattgaaaagaaataattctaactaattctaaaacctgCATACACTGTAAGAACAGCaactaattataaataatggAAACAAATATAAGAAACCGTACCCAATAAAAGGAACCAAAACGAAATATTCGACCCACGTGTGTCCTCTATGGCAACATCAACAACACAAATACGCTAAGTTAACGTGTGATTCTGATATGTaaagtaaatcaataaattacaGGAAAAATGATACTCTGAAATCAACATGGGCTAAAACCGATGATATTTTAGACAGTATTCCATTCACGGTCTTTTAGATTTGCTCTTTTCGGTACCATAGACGGCTGTTTGTTTTAGCTTGCATGGTCAGAGCACTATTAAGGGGGTGGAGGAAGGGATAATGGACGTTTTTAGAGACCAGAGCTCTTGGTGCTTGTTTGATTCTTCTAATGAATCTGTTagttaacactttttttttttttttttccattttgttgttgttcgtTACATTTGATCCTTTCACTATTCTGCAAACCATTTCAGTGTGacgtttaatttcttttttaaaaaatatatatatcttttgttCTCAGTCAATATAAAAACGAAGCACATTGCACTTACTGTTCCAtaggaaagttttttttgtcttttttttttaatgattattattgtagttGCTCAAGCGGTGCAGTATGTTTGTTTCCTGCCATTGTCCTTGGCTCTCTGAGGGGATGGGGAGCGGTGTAGCTAAAGGGTTCGTTGGGACACTCGGCTCCGAGGGACGACGCTAAAACCTCCCTATGGTCACCGGGTGCACTGCAGGGTTGCCTCGGTCGCTATGTGTACCCCATTGCTCGTTTTAGAGGGCGGACCAATCTTTACGTCTAAGGTTTTTGTCCCCTCTAGGGCACACCACCGATGAGTTCCGGGATGAGTTGCGTTAGCGTTAGCGTTAGCGAAAGAAAATGCATTGCGATGTTAATGTGGCGAAAGCTGAGGGGGGTTAGTTCAAGGTGTATCACAGTTTTTTGATACAATGGGAATGCTGTGGAGGGCCTAGAGACACtttgatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagatgtgtgtgcGTTCACGCTCTAAATGTTTCGGACTGACTTTTTTCCCTTCATCAGTGACAAAGCTAAAGATCCCTTGGTTGGTTAGTGCTTGTGCAAAGGAGCAAAATTAGGTGTCGACGATATGAAGGTGGAATACATAAGATATGCGGAGcggaaattaaattaaaaacgaaCAAATCTAGACAGCACAATGATAGACATTTTGCTTGTTGCGTTGACATACTGGCGAATATAATTCACTATGGATTATTGTGTGAGAACTGATTACATCGATAAGTGCAGCTACATTACGTTAAGTCAatttccaactttttttttttggtgcaccAAACATGCTGAAGCGTTATGGTGATTTCTTCTCGTTCGTTTCTGCCGATACAAGATGAGATGCTCTGGGTGTTCGATGCGACGCCATTTCGAGCTTCACTGCACCGTCATTGAAGCAACGCTTGATTCTTTTCAACACTTTAGAGAAACCgtaaagttgttttgttttttttttcctgcgtAATGCATACATGTACCTGTCtgctgattctttttttttttttttttttttttttttttttaaacgtttcgtatgtttctctttttttttttgtatttttgaaaatgaaatggtTTCACTGCATGTAAGTCTTAGTCCCCAACCCTCCGATCCCCTCCCTTACACCGCAGACTGGCTCTCTCTCCCCAAAGTTGAAAACTCTGAAAATAAAGCCATGCGGTGTGTCCAAAGATTTCCACGATTTAAGaatctgtaaaaatgttgcACAAGgtcttgtgttttttcttcgtagatataaaaatatattaatctcTAATGTAATCCTTTCAAAGAGATCATTGTCCTCTTTGGCTAACACAGCGTTATTTAGAAAAGCAAAATGTCACTTGATttgaacacacatttacatcTTTCAGTTCTTTTCTTCGTAATAATGTGAAGTTTTGCGATTTTACAGCAATGTCTCTCCCCATGGAACAGTTTCGTTTGTTTTATCGCAGGACTGTGGACAGCTTGGGCATTGTCTTTAACGTATCTAGGGATTTTTTCAGTTATGAtatgagtatttatttatttattttaaaaagataaattttTGTGTGGCTGCGACTCGCTTTAAAGGGCCTTGAGGACATTTTGATTTGATATGTAGCTGTTTAGATATGCTGGGGCTGCTAAAACCAGTTCGGGAAAGCGAATTATAACGCGATTCTGTTTAGTGAATGGAGCTAAATGTATCTGAGAATTTATGAAGGCCAAGGGCGACCGATCCCAGTGTCCCCTGACCTTCATAACAGCTCAGATTTTCTCAAAGAGCTGGCAAAACGGCCTTTCCTACTCCCGAGCCAttcaaacttgttttaaaatgatctaataTGGTTCTGGATTCCGCAGTCGGCCTTCATAATTGGTTTGAAAGACTTTCAAAAGAATTCCAAATGCCATCGCCATGGGAACACTGTCGAAATGCCCCTAGTTACACAGACAACTGCATGTGGTGGAATCGATTCTAAATTCTAACTCTACAACTCAGAGTGGAAAGGTACGAGGAGATTCTTGGTTGCCATGTTTTGTGATGTTTCGCTACGCCCTCCGACGGAGGTGCGCGTGTGcatgtgcgtctgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcacgaGTGTCTCATGTGATGAACGTTGTCTTTCGGTGTGCTGAGGTGATTGTGATGACCCCCGGGTGACCTCTCGATTTGTGACTACCATCCACAGTTTGTTCAGTGGCTGTTGGTTTGGACCTCGAGTAAGGTGTGTGTGGTGCCATAAGGCAAGGTTGCAACCTAATGTAGAGCCAGGAAACCGTAATCAAAGTTCTAGAAAATGCTTACATATTTGGCTATTATAACCACCTTAAATGTtgaatatatatagttatatcataatatatataagagaacactgttttaatcatttttctctaaaaaatCACTGATTCAAAATGCCCAAGTGTAAAAAAGTGACTACATCCTCTGAAGCCAGAAGGGAGAGTTACCGGGGCAAGATTTCGGGTAAATTGCACATATTCgattaacttttctttttttttttttcgtcgtTCATTGACCAGTTCTCTTACTTTgcctgaattaaattaaatctctgCAGACATTCTCTGTCACATTCATTAGACTGTCCCTCCTCGTGGATTTCCCCAGCACCGCCTCACAACTCTGCTAATTCAATACAGGCAAATGTTGGGAAGGACTAGCATGTTGtgtaaagagaaaagaaaaacgactctacttgtgtatttttgttcgaAACAactaaacgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtagaatgtgtgttagagagagacTCAGTCCAGGCCCATGTAGAGTGAATGTACAGGGAGCTCAGTAGCTCCCCCTGCATGTTAAAGAGCAGTAGTGACTAGGCCTTCCTTCAGGCCTTGTGTTGCTTGCTGGTCTTGAAGGAGACCTGCAGCACGCGGTCGCCCAGGCGGTAGCCGTTCAGGCTGGCGATAGCCATGGCCGCCTCGTCGTAGTTGGTCATGGTGACAAAGCCAAAGCCCTTACATTTGTTGGTGGTGAAGTCACGGATGACCTTGACGTTTGTGACGGCGCCAAACGGCCCAAAGAGCTGCCACAGGACGCTTTCATCGGCTTCTGGGGACAGGTTGTAGACAAAGATGCACCAGCCGGCTCCGGTGGGTCCGGTCAGGTTGACGCCGGCTAGACTGGTCATGCTGTCAATGGTTATGGGGGAGAATCTGGGGAGGAAAGAAGGAGAGCTACCATGGGTGTCATTCTGAAGTTCAGCACAGCTTGCTTCTCATTACCACTTTTGTCTCTGAGGACTGGACACTCGCTCTTCACAGCCTTAAGTAGATAAGAAAACGGTCAGCTATCGTATTGTTAACTAGGTTGACCAAACCAAACTCTAGTCCCTGTTAGGACACAGAATTCACAATGTAACAAAATCACGATATACTGTACTTAGCAAAACAGAAACCTAGAGAGGGATGAAGGCAAATCAGAAACAAATCAACGGAAAATTGGAAACGAACAGAGGAGACGCAAACGGAATCTTGTATGTCCATGCTGGTggaaaaaagacattaaagcaaccaaaactgaaaaaaaataataatgttagttCAATACAGAAATACATACAAATCAGTTCAATCAAGGAATCaaccaaaagaacaaaaaggttCAACAAAGCCATGCCAGAATGTCCTGCTGTGATATCAGCTACATCAATCTAGTCTACTGAACGGTGGTTTCTCAAATCAAATCTCTAAATGGTAATGCTTAAGTCAGCAGGTGATATTCCGGGCACTTTGTTTGAGCTTGTTTAGGCATGGATGCTTTTGAAAGGACaccttttttttggaaaattacCTCTTGACTCCGTAGCTGGCGTTTAGTAAATTGTCGAGTCTGCAATGCAAGAGGGAGAGTGACGGAGGTGAAGATATTAGTTGCAAGATCCAACAACCAGAGCAAAGCGTTTTCATGCAGCCACTTCAGCCACCAGGGGGAGCTCTTTACTGGGCCCCGCGTCCACCAATCAGCAGGCGGCGGCTCGCCCATCTCACTGACGCAGTGCTTACAGAGCCCTCAGGCGATGGATTGAGAGTACTGCGATGAATGCTTGTGAATGCATCCTAGCCGTGACTGATTCACACGCCGCGTTATATCTCTAAGCAgggcttttcttttaaaattaagcaCTGTGATTTGTCGAAATCCCCCTGATGGCGGGAACGCGCTGCGGTTTAAAGGAAAACCGGCAGAGGAAGAGTAGGGAGCGGTAGGGGTGTGGGCTGCAGGTGGGAGCAGTACCTGAAACGCTGAGTCTGGTGGTGCAGAGGGCCGGTGAAGCGGCGAGCAGCTGTCTGGTAAAGCTGGGTGAGCAGGGCCTGTCCCGTCTTCTGACTGGGGTTGTTGGCGAACTTCACGGTGATGGGCTCTGCGGCGCCCAGCGGCTTTTGTCCGTTCAGGCCTTTGATGGCTTCCTCTGCCTCATTTCTTTTGTCGAACCGAATGAATCCTACTCCGCGCGATATACCTGCTCCGGACTGTGACCTGGTCTACCAGGATGCGTGAGGTGATGATTCTTCCATACTGGGAAAACAACTGCTCCATGTCTTTCTGACTCATTGTTTTGGGCAGGCCGCTCACGTACAGGTTGGCATCGCGTATGGAAGCCGAGCTTGGTCTGGCATAGGAC

Function

NR:

description
PREDICTED: ELAV-like protein 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27812 True 6654 lncRNA 0.36 2 9901531 9908617

Neighbor

gene id symbol gene type direction distance location
LOC122338283 LOC107754021,LOC108443460,LOC103358228,LOC100691522,LOC107587920,LOC107674652,LOC107703354 coding downstream 22954 9833670 ~ 9878577 (-)
kank2 kank2,LOC107703353,LOC107674641,LOC107596805,LOC107587974,LOC107754027 coding downstream 69314 9811193 ~ 9832217 (-)
hbae3 hbae3,LOC107674645,LOC107588003,LOC107703327 coding downstream 92203 9808052 ~ 9809328 (-)
LOC122341755 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding downstream 99440 9801281 ~ 9802091 (-)
LOC122341747 hbae1,si:ch211-5k11.2,LOC107754049,LOC107674601,LOC107596827,LOC107754026 coding downstream 102732 9797999 ~ 9798799 (-)
prkcsh prkcsh,LOC107725022,LOC107754018,LOC107703311,LOC107587972 coding upstream 1359 9909976 ~ 9917069 (-)
abat abat,LOC107690246,LOC107738621,LOC107685926 coding upstream 32668 9941285 ~ 9963128 (-)
mettl22 LOC107738618,LOC107733833,LOC107590588,LOC107685927,LOC107568640,LOC107690247 coding upstream 55834 9964451 ~ 9974561 (-)
fbxl16 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107733860,LOC107568127,LOC107690242 coding upstream 388813 10297430 ~ 10315726 (-)
gsg1l gsg1l,LOC107690243,LOC107738642,LOC107685933,LOC107568433,LOC103031039,LOC108436662 coding upstream 423606 10332223 ~ 10346307 (-)
G18634 LOC107596828,LOC107588005,LOC107596825,LOC107703325,LOC107587921,LOC108440249,LOC108440213 non-coding downstream 108346 9789616 ~ 9793185 (-)
G18628 hbaa1,si:ch211-5k11.8,LOC107682494,LOC107587926 non-coding downstream 115407 9785249 ~ 9786124 (-)
G18623 NA non-coding downstream 148009 9753235 ~ 9753522 (-)
G18608 NA non-coding downstream 254965 9646313 ~ 9646566 (-)
G18602 NA non-coding downstream 310240 9589921 ~ 9591291 (-)
G18717 NA non-coding upstream 493216 10401833 ~ 10402211 (-)
G18745 NA non-coding upstream 665550 10574167 ~ 10579140 (-)
G18771 NA non-coding upstream 768840 10677457 ~ 10678580 (-)
G18795 LOC107732905,LOC107729518,LOC107551141,LOC107551149,LOC107690331,LOC107680850,LOC107561346 non-coding upstream 780547 10689164 ~ 10697539 (-)
LOC122334019 NA non-coding upstream 780802 10689419 ~ 10695504 (-)
G18433 LOC107670519,LOC107563315 other downstream 438626 9426572 ~ 9462905 (-)
LOC122331343 LOC107672446,LOC107711185,LOC108429658,LOC107579184,LOC107567225,LOC106600921 other downstream 763442 9134043 ~ 9138089 (-)
zgc:113210 NA other downstream 894088 8992714 ~ 9007443 (-)
fmc1 NA other downstream 1502703 8309532 ~ 8398828 (-)
LOC122342198 NA other downstream 1682476 8218902 ~ 8219055 (-)
rbfox1 rbfox1,LOC107733849,LOC107690317,LOC107685930 other upstream 85216 9993833 ~ 10210616 (-)
eef2kmt eef2kmt,LOC107690238,LOC107733874,LOC107568155,LOC107680861,LOC107738633 other upstream 485697 10394314 ~ 10396341 (-)
lrrc4ba lrrc4ba,lrrc4b,LOC107551155,LOC107680881,LOC107667844,LOC103034410,LOC107563987,LOC107732840 other upstream 1103319 11011936 ~ 11064598 (-)
syt17 syt17,LOC107729446,LOC107658452,LOC107564007,LOC107732856,LOC107674134 other upstream 1503368 11411985 ~ 11429179 (-)
map3k3 map3k3,LOC107658467,LOC107583042,LOC107570753,LOC107674169,LOC107721962 other upstream 1785655 11694272 ~ 11714719 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025683 NA non-coding NC_007114.7 CM002887.2 46798512 ~ 46803047 (+)
grasscarp (Ctenopharyngodon idella) G331282 NA non-coding CI01000113 null 117641 ~ 219233 (+)
rainbow trout (Oncorhynchus mykiss) G332648 NA non-coding NC_048568.1 CM023222.3 22134442 ~ 22134980 (-)