si:dkey-66i24.8 (LOC107658431,LOC107583056,LOC107729444,LOC107732851)


Basic Information

Item Value
gene id si:dkey-66i24.8
gene name LOC107658431,LOC107583056,LOC107729444,LOC107732851
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11362983 ~ 11367115 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228438.1
TAAGACGATGGCAACAACGCAACCCAGTAGATGACATGCCCCTGGATACtgatttcaaaacacaaattttacCATCAGACGCTTTGAGTTCATAGCAGAAAGACACAGAGTAAGATTAAATCCAGTAAAACGCTGGCGTTGTCCTTTTATTAGCGTAACAAGCAGGGATAGATCAAGGTGATATGCAACTTGCATATAAAGATgatgtttattaaagaggaaaaTGATGACACCTGTGATCCTGATCCCTGCAGAACAGAAAATGAGCTCAAAGAAGGCCTGGCAGAGGTAAAGAAGGAAAGTCAGCTTCTAAATGAAACGGAGGAGAAACATCATCTCCTCACCGGAGAAAAATCCCAGATTCGCTGCCAGTCCGGAAAAAACGGTTTCTCACAAAGCAGCACTCGGGCGACAGAAAAAAAGCCTTTCGCCTGCTCTCTGTGTGGAAAGCAGTGTGCCCACAGAGGCCACCTGAACGATCACATGCTaactcacaccggagagaagcccttcTCCTGCCCTCAGTGCGGGAAGAAATTCTCTCGCAGAAGAAGCCTCGGCGATCACGTGCTAATTCACGGCGAGCAGAAGCGCTTCGTTTGTCCTCGGTGCGGCAAGAGTTACAAACGCAACGAGCACTTTCGGAGCCACTTACTGAGCCACGACGGAGGCAAACCCTTCACCTGCTCgcagtgtgggaagagtttcagtTACAAACGCACCCTTAACGACCACGTCAAAATTCACACCGGAGAGTGTCTTCACACGTGCCTtcagtgcggaaagagcttcCTCAACAAAGGACACCTTAAGGACCACTTAaaaatccacaccggagagcGGCCCTTCGCCTGCCctcagtgcggaaagagcttcATCAGCAAACAAAACGTGACCTCGCACATGAGGATACACACGGAGGAGAAGCCTTTCAAATGCCTTCAGTGCGGAAAGGGCTTCGCGTGGGCGAGCTGTCTGAAAATCCACACGCGCCACTCTCACTCCCGAGAGAGGGAGTTCGCCTGCGAGCACTGCCACAAGACGTTCGTTTTGGAGTCGTACCTGAAGAGGCACTTGAAAATTCATCAAAACGAGAAGCCTTTCGTCTGCCCGGTTTGCGGGAAGGGTTTCTTGTGGCTGCTGTGCTTCAAAGCGCACCAGAAAATACACGAGGGCGTGAAAACCCACGTGTGCTCCGAATGCGGGAGAGCCTTCGCCACGGCCGATTATTTGATAAAGCACCACAAGATCCACGTAGGGGAGCGGCCGTTCGCGTGCTTGTACTGCGGAAAGGGCTTCGCTAAGAAAGCGAACCTGGTGGATCACGTGAGGCtgcacaccggagagaagccgtacGCCTGCGCTCACTGCGGAAGCAGCTTCACCTCCAGAAAAGGTCTGAGCTATCACAGAGAGAGGCACTGTCCTCGAAGCGTGCCGAAGACCTGTTCGCTTGAAGTCCAGACGGTGTCGGATATGCCTGAAGACCGCGTTTCTGCCTAAAAAGCAATTACTTCTAGTACCTTTAGTGGCGAATAAGCTCACAATCAGTTTAAATGGCTGCAGGACGTTTGTGCATCCAGTACTTtaatataaaagtacaaaaatacaagAGAAAACGAGAGTGGAGTCTGGAaaactgtacatattttataatgcataattgCAAATGTCCCTTATAGCCCTGTCCCTTTCTTCTGTCATCATTATTTCCACAGTCCCCCCTCGAAATCGGTTCCTTTAGGACTCCGTGATCCCAtatcaatgtaaaaacatatggCTTACTATATAGTGCATagaacaaaatgcataaaaaaactaattaattgtCATTTCGTGCACTTGATAAACTgctgattaataaataaaagtaacaatatCCTattaagtggaaaaaaaaataattggacatataattcaataataatattaataatcgtGAATGATAAGTGCAAATTCCTGTATAAAAGCTGCAGCTAATCAGGTATCTCTGTATGCTAGGCTAGTACATAAGCtaacaaatacaattaattatcaGTGTAAcataattttcagcatttatcaTAACCTAATTTTGtagtaataaaagtaatttgagCCAGCGATCCCATTGATCCCAGCTTGGGGTCCTAATGGGACTTGATTTCTCACCACAAGGGTCAGGTATGAATTTCTGAATCTTCCCAGTCTACTGACATTTCTTTTGACACCCGAttcaaaacattacagtacacGTGATAACTTTGGTTACGTCTCCAATAAGTAAATCCACTACACCAAGCTAATGACTCTTCAACAGTGATGCTATCCAGCTTATTTTTTAATGCGGAAGTACGCTTTGTTTTGAGAATGTGCAAGGTCTATTGGCGGCTGTAGGGAAATAACGAGAGTAAACTATAAAACTGTGCGCTACAAACTACTGTATTCATAACTatgataatgcatttaaattaaatggtgAACATCTGTTTGCAATATTAAGCGGCACAACAAGCTGTTTTTTACAGCTACAAATAGCTGGATGCGAAGGACATCAGAACCCAGACAtgtttaatttacaataaatgctttttgtttatctattagattgtgttttattaatgtctatgccaaccctaaacctaccacataaaataattttaaaaaatcttgtaATGTTgtacagtgtgaaaaaaaaacaacctcccAATGCTATATTGATGTATGCATGCCCAGTATACCACAGCTGTATCCCATCTGGTCTCTATACAGTAAAGACATGGTGGCATTCAGtcactgcaacattttcaaagacAGATTTTTGAAGATGGCTGCGCAGTTGTTTCTATGACACATATAAGCTCCGTAGTATATATTTAGAGAGGGCCAAGCATGCATAGGCACATGGAGGAATAgcctatattaaaaatataagcatatttgtatttttcataaatgttattTCGAAGAAAATTTGTCTTGGTCAAAATCGTTGTTGATGATTCAGCAAATTCAAAGACCTAGCTAgctatagaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttggtgcTAGTCTTTATggaactaaatatataaacatttgctTTGCTATTACTCATACTCTTTGGCATGCTACGCAGAACagtgtttgtaaatgtttactgta

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF57.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228438.1 True 3182 mRNA 0.42 2 11362983 11367115

Neighbor

gene id symbol gene type direction distance location
si:dkey-66i24.7 si:dkey-66i24.7,LOC107674138,LOC107732877,LOC107658448,LOC107563999,LOC107729523 coding upstream 17049 11344269 ~ 11345934 (+)
prf1.1 prf1.1,LOC107658428,LOC107583105,LOC107729447,LOC107732857,LOC107674141,LOC107564016 coding upstream 49614 11308682 ~ 11313369 (+)
prf1.9 LOC107729509,LOC107583107,LOC107658427 coding upstream 54426 11305325 ~ 11308557 (+)
cldni LOC107729510 coding upstream 81242 11278737 ~ 11281741 (+)
mybpc2a mybpc2,LOC107729557,LOC107687621,LOC107680879,LOC107732898 coding upstream 356349 10978149 ~ 11006634 (+)
clec19a clec19a,LOC107658453,LOC107583104,LOC107736754 coding downstream 40922 11408037 ~ 11413269 (+)
LOC122341817 c1ql1,LOC107729572,LOC107658458,LOC107583048,LOC107674128,LOC103367899,LOC101070426,LOC104923905 coding downstream 130538 11497653 ~ 11515159 (+)
ccdc43 LOC107674137,LOC107729438,LOC107583050,LOC107658459,LOC107721961,LOC107564021 coding downstream 224485 11591600 ~ 11594168 (+)
fzd2 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC107721960,LOC107564008,LOC107674136 coding downstream 236559 11603674 ~ 11606177 (+)
mylk5 LOC107583040,LOC107729567,LOC107658462 coding downstream 249080 11616195 ~ 11629282 (+)
G18960 paqr4a,paqr4,LOC107674132 non-coding upstream 68378 11289747 ~ 11294605 (+)
G18932 ppp1caa,pp1g,LOC105897688 non-coding upstream 91877 11270202 ~ 11271106 (+)
LOC122336311 NA non-coding upstream 169988 11189556 ~ 11192995 (+)
LOC122336295 NA non-coding upstream 200076 11161878 ~ 11162907 (+)
G18982 NA non-coding downstream 4387 11371502 ~ 11375401 (+)
G18946 smg1,LOC107729485,LOC107583093,LOC107658410,LOC107732845 non-coding downstream 13158 11380273 ~ 11380790 (+)
G19123 NA non-coding downstream 69829 11436944 ~ 11437197 (+)
G19126 NA non-coding downstream 73391 11440506 ~ 11441338 (+)
G19184 NA non-coding downstream 345494 11712609 ~ 11719579 (+)
LOC122331261 cox6a2,LOC107564019,LOC107658449,LOC107674165,LOC107583062,LOC103367329 other upstream 27158 11333741 ~ 11335825 (+)
kcna7 LOC106518874,LOC108237811,LOC102213725,LOC102789930,LOC102292646,LOC101488024,LOC100711099,LOC105891650,LOC107729520,LOC107097254,LOC107551170,LOC102237047,LOC107551147,LOC107732850,LOC107729474,LOC107561361,LOC107680852,LOC108434931,LOC108278793 other upstream 520476 10752759 ~ 10842507 (+)
LOC122333995 LOC107561345,LOC107732849,LOC107680844,LOC107729518,LOC107551149,LOC107690331,LOC107732905,LOC107561346,LOC107551141 other upstream 664443 10691890 ~ 10698540 (+)
G18574 LOC107568067,LOC107690317,LOC107733849 other upstream 1259522 10025818 ~ 10103461 (+)
hbbe1.3 LOC107596825,LOC107596828,LOC107674643,LOC107754023,LOC107587921 other upstream 1563187 9798815 ~ 9799796 (+)
G18949 NA other downstream 1778 11368893 ~ 11369752 (+)
kcnc3a kcnc3a,LOC107693499,LOC107548332,LOC107729449,LOC108427388 other downstream 406085 11773200 ~ 11833924 (+)
syt5a syt5a,LOC107658481,LOC107583026,LOC107730742,LOC107548337,LOC107689676 other downstream 518540 11885655 ~ 11893656 (+)
prr12b prr12b,LOC107689691,LOC107729421,LOC107583015,LOC107658420,LOC107554076,LOC107730729 other downstream 660034 12027149 ~ 12049422 (+)
LOC122342134 LOC107729418,LOC107658494,LOC107689662,LOC107554108,LOC107583010,LOC107730753,LOC100007086 other downstream 725488 12092603 ~ 12100852 (+)

Expression


Co-expression Network