LOC122334199


Basic Information

Item Value
gene id LOC122334199
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3866755 ~ 3874839 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043232052.1
TCCCTAACTAAACAAGAAACGACAACCTCATTGGATTGCAAATCTTTTAAACTGTATGTACTAACAAGTTAATTTTCGCGGGGATATTTCAAAGCGCTTGTTTTCATTGGTTCAGCTTAAGTTCAGCGTAATTCAATAAAGCGAAAGCGAAAGTGAAAGTTTTTCTTGAAGCGCGTCCTCCCGtgatcctttttttaaaaacgttttcatgattatttattatataatggtagatttgtctgtttttaactCATGATGGGCATGCTTGGCTGTGTTTTGATGTCACTGCTTGTGATGGTCGCTGATGGCTTCGTCGTTCACGGTTCCTCTGGTCCTCTGGTTGCTCCTCTGGGATCTTCAGTGGTTCTGCCCTGTTATGTTGATAAACTCTCATCAATGAAGGGTCTGGAGGTGGAATGGAGAAGAGCAGACTCAAACGCTCTGGTTCACTTGTTTCTGGACGGTGAGAGTCGACCAGAGTCCCAGGAGCCGGATTATCAGGATAGAGCTCATTTCTTCACTGATCAGATTCAACACGGAAACTTCTCCCTCCGCCTGGACAACCTGACAGCTGAAGATGAGGGACGATACACATGTAGAGTTTATAGTCAAGAAGATTCTGGAGAAGTTCTGGTTCAGTTAAAACATGAGCGATTTCTGGTATTGGGATCCGATCGGTCCGTGTCTGCGTATGACGGCGAGGACGTGACTCTGAACTGCTCTCTAGATTCTCACGTCTCACTCGAAGACGTTGAGGTGTCTTGGACAAGAACCGATGGAGGTATTCTGGTTCTGCTCTTCCAAGACAATCAGACTTTCTCAGACTCAGTGGATGAGCAATACAGAGACAGAGCCGAGTTCTTCACTGCTGAAATCTCCAAAGGAAACTTCTCTCTCAGACTCAAGAGTGTCAGAATTGAGGATAAAGGGGTTTATATGTGTCAGGTGTCCGCCGGAGTGCTTTCAGCCAATGTGACTGTTGAACTGGAGCAACTGGGTTTCTCTTCCTGGCACATAGCtgtgctgtttttctgtattgCCGCTGGCTTGGCAGCTGTGCTTCTGCTTGTGTCTCTGATCTGGTGCAGGATGAACAACGCTGCCGGTTccatcaGCAAGAAAGTCTGTGATCTGCAGCTTTCTCTGGTCTTTTGTCCAAACATCTGTATGTTCTTGGCCTTCATGCTCTGGGGCTTCACTGAAGCATCTCTGAATGAGACCATCACTTGCTGCGCTCTTTATATTCTGAGGCCTTTCATGTTGATTTGGGCTATGCCTTATTTAAACTATCTTCAAGGCAACCTTAAAGCATGGatcaagttttttaaaataaccagaGAATTAGCTATTTTTACAGTGGTCTTTTATTCAGCTCTTTTTGCACATGGCTGGAGATTGAGAGCACATGATGCTAGCATTGTGCCTCGTGTAGCCATGGGAATATCATTTGGAGTTATTGTGCTGTTGTGTCTTCTCTTGAGTAGAGgttttaaaaacaagattctgcatttaattttaatttcttgctTGTCTGTTTGCCAAATGAGCCAGCTGATGTTCACATTTGGATTTTCCTCTCTGGGTAACACCTAAATACATATCcttttattaaactaatattcaaaaatgacatttgcttattttgtttctgtgtgtaaaaaaaacacacattaatattaatatatgcatataattcaGCCAGTTTCATCTTGATGTAGATCTTCTGGAATATATTCAGTGTTAACATGAATGCACAAACTGAATTTAATATGTTATcaatgatttttacatttatgttaatttctgAGCATATCATATGATGTGTTTCAATGACATTATGTACTGGTGATCTGTTTGGATGGGAAATAATGGATTAATGAATCATTCtcttattttagaaattacCATTGCGGGAATTGTTTCGATTCTACTGATAAACTTTATATCGTTTTTATCTTTTCTGCAAGCaagatttaaattACTCCACCGTAGATGTATAACATCATTGTGGATGACAATGACGCTCCTGGCTGGAGTCCTATTCATGTATTTTCTTTCAGACCTATTCAGAAGAGAGAAAGCGTACCTGGAATGGACCTGTGtcagtttatttattgaagTTCTGAAGATGATCGTGGTCTACGTGAAAGgGGCAGAATGTTTAGTGGCCCAGAGACGAGGACAACAGACTGAGATGAGGCAACATGAATCAAGTGCATtgtctCGCTGTAATGAAATCGTGTACATGTTTGGAGCAGTTGGTCTTGTTTTTCTGATCTCTGTTACACTGATAGCAGAACTGATCCTGAAAGCACgaaATGGAGAGCGTGTCATTAAGGATCTAGGAGTCATTGTCTTTCCTTCTGAAtgtgcttttgctttttattgGCTGGTTTTACGAGTACATGCTTGCTGGAAGATTTTTACAGCTAGGACGCATCCGAGAGTCAACTAGAGAATCTGTCTGGACCTGATCTTgctgacacagacacagacacgagaaacaaactcataaaCATTTCCCTCTGTCTGGAGTAAAAACCAACAAACTGAGACTGAAAACTACAGTGTTAAGTGGAGAGTTTTGTAACACTTGGATAATTTTACATTGGTTGCTGAATCatttcaaaagtaaaatgtgatgtatttttgagGCTGAATTAAGTTTGTTATTAGattattctaataatttaaaactaaatatttcacagtttgagGTGCAGCTCATATGTGAATGTGGTGTTTATTCAGTTAAATATGAGGGAGCTGAACGTGAAGATCTTTGAGGCTGTTGCATCAGTGGTACGAAGCCCACATTCTGCTTCAGCTAAAAGTGAAGTTCTCTTCTTTGTAAATATGTAACATGTTAAGATGATCCAGCAGTTTGTAAAGTGTCTTAATTGCATGCGGTGTGTGCGTATTGAGTTCAACAGCAGTTGGACACTTTAAGAGACTGTGATTAATGTTTAGTGATTCAAATCTGAGTTCACTGAAGACATAGAATGCTTGTCAAGATGTGTATTTCAACATAACTTGGTATGTATTACTTGGTATTGTCCATTTAGGCcccaaaaaatgcaaaaggcaATAAAGTGTTTGCGGGCTGTAA

Function

GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043232052.1 True 3109 mRNA 0.40 16 3866755 3874839

Neighbor

gene id symbol gene type direction distance location
LOC122341930 LOC107750166,LOC107663479,LOC107655787,LOC107716258,LOC107721796,LOC107720837,LOC107721799,LOC107575760 coding downstream 19770 3831970 ~ 3846985 (-)
map2k4a LOC107695698,LOC107756562,LOC107570719,LOC108433489 coding downstream 38063 3814881 ~ 3828692 (-)
elac2 elac2,LOC107750164,LOC107695696,LOC107575629 coding downstream 58371 3789068 ~ 3808384 (-)
LOC122342169 LOC107695697,LOC107696366 coding downstream 155241 3635947 ~ 3711514 (-)
LOC122341986 pirt coding downstream 246628 3618343 ~ 3620127 (-)
mif4gdb mif4gdb,mif4gd,LOC107724678,LOC107553652,LOC107570710 coding upstream 2808 3877647 ~ 3881562 (-)
LOC122333498 NA coding upstream 7061 3881900 ~ 3888478 (-)
LOC122340901 LOC107695670 coding upstream 27321 3902160 ~ 3908979 (-)
LOC122340995 rnps1,LOC107553655,LOC107673212,LOC107601591,LOC107716265 coding upstream 67101 3941940 ~ 3946465 (-)
LOC122341029 NA coding upstream 77980 3952819 ~ 3954039 (-)
LOC122342142 NA non-coding downstream 79890 3783737 ~ 3786865 (-)
G16815 NA non-coding downstream 244886 3621489 ~ 3621869 (-)
G16779 NA non-coding downstream 339907 3503008 ~ 3526848 (-)
G16780 NA non-coding downstream 341517 3475325 ~ 3525238 (-)
G16901 NA non-coding upstream 262279 4137118 ~ 4138203 (-)
G16926 NA non-coding upstream 359536 4234375 ~ 4277855 (-)
G16930 NA non-coding upstream 390372 4265211 ~ 4267492 (-)
G16933 NA non-coding upstream 440342 4315181 ~ 4315571 (-)
G16949 NA non-coding upstream 494886 4369725 ~ 4371084 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other downstream 2904 3847980 ~ 3863851 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other downstream 383306 3473444 ~ 3483449 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other downstream 547569 3314752 ~ 3319186 (-)
G16478 NA other downstream 1212725 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 1226664 2631782 ~ 2640091 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 109817 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 528258 4403097 ~ 4407697 (-)
G17131 trap1 other upstream 572541 4447380 ~ 4448881 (-)
G17133 trap1,LOC107573746 other upstream 575476 4450315 ~ 4453135 (-)
LOC122341034 NA other upstream 727712 4602551 ~ 4650642 (-)

Expression


Co-expression Network