LOC122340901 (LOC107695670)


Basic Information

Item Value
gene id LOC122340901
gene name LOC107695670
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3902160 ~ 3908979 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234156.1
cttgccTAAAGCAAAAAGTAAAAGGTTGAAAAGGAAACGAAAACCATTTCAATGAGGATTTTTGAGAAGTCTCGTggttattcatatttaaatgcatcaatCCGAAAGTGTAAGTTTCAATTGTTGCAGTAAACATGGACTCGCAGTTCGCAGAGGAACTTAATTGCTCCGTGTGTTATGAAATCTTCGAGAATCCTGTTGTTTTATCGTGCAGTCACAGTTTCTGCAAGGAGTGTGTTCGACAGTTCTGGAGAACCAAGGAAACGCAGGAGTGTCCCGTCTGCAGGAGAAGATCCTCAAGGGATGATCCGCCGACTAATCTTGTGTTAAAAAACTTGTGTGAGTCgttcctgaaagagagaaacaagagCCATTCGTCGGAGCCTGAGGAGATATGCGGTCTACACGGTGAGAAACTCAAGCTCTTCTGTCTGGAGGACAAACAGCCGGTGTGTTTAGTGTGCAGAGATTCACAAGCACACGATAACCACAAATTCAGACCAATCAGTGAAGCAGTTTCATCATATAAGGTGAAATTAAACACAGCTCTAAAATCCTTACAAGCGAAACTTGAACACACTGAGAACATTAAAGCGGAATTCGAGAAAACAGTTCAACATATCGAGTCTCAAGCTGATCACACAGAGCATCAGATCAAACAGCAGTTTGAGGAGCTTCATCGGTTTCTCAGAGATGAAGAAGAAGTTACGATCACTGCActgagggaggaagaggagcagaagaagaagacgatGAAGGAGAAGCTGGAGGAGATCGACAGACACATCTCAGCTCTTTCAGACACAATCAAAGACACGGAGGAGATGATGAAAGACAACGACGTCTGCTTTCTGAAGaagTTTCCGGTCTCGATGGAAAGAGTCCAGATCTCCTCACAGCCGGATCCACAGACACCTTCTGGAGCTTTGATTCATGTGCCACGATACTTGGGCAACCTGTCCTTCAGAGTCTGGAAGAAGATGTGGACCACGATCCACTTTACTCCTGTGATTCTGGACCCAAACACGGCTCATCCGTGTCTCGTCCTGTCTGAAGATCTGACCGGTATTAGAGACCGATGGAACAAACAACCTCTTCCCGATAATACTGAGAGATTTGGCCGCTTTTCCTGTGTTCTGGGTTCGGAGGGCTTTCATTCAGGAAAACACAGCTGGCACGTGGACGTTGGAGGGAATTCGTACTGGATTCTCGGAGTAACTGCGGCGTCGAACCAAAGAAAGGGCCGTGGGTTCTTCGACGCCGATGTGTGGAGCGTGCAGTACGGACTGCACAAATGCTCTGGTTTTCCCGTTAAGCAGAAGCTTACGCGTGTGAGAGTGCATCTGGACTACGACGGAGGAACTGTGTCtttcacacatatacacacgttCACAACCACCTTCGCTGACGCTGTCTTTCCCTTCTTCGAAACCGCTTCTTCTCTGAGGATCCTGCCGTTCAAAATTAAGTAGATGTTGCGTCTGGTTATTCCTGCTTGCATCTTTCGCATCTCTGGATCAGCAGGCTTCTTACACGGATTATAACTCTTCCTATCGTCCATCGGTTGACGTTGATATTTCAGCATACAGCAGCAGACGTTTTCTCATTACGATTTCTGACCTCTGACCATCCATTTTCACCACTGTATCTACAATATAGTGTCCTTCAAATAAATCTAGGGTGATCGGATGGCTTACGTTAGCAAACAGCAGCAGTGTTAGTATCTGCGACCCGTATTAACCTTTAACAACCAAGACAGATGCAAGTTTGAATTGAATGTTTCCACCTAGATGGCACAGTCAGTTAATAGTTAATGCATTCCAGTCCTGTCATTGTTTAATGGGTTTTGCAATACTGTAAGATCACACAGAATTGACACAGTTTGCAGAATCGACGTTGTATAAGATATATGTTTTGTTCCAACATTGCATTAACATTACGACGTGCATGATATGAGCACGTGGGGATATAATCGATCTAGATATTCGGTTCACCTGCGCCGTCGAAGACACCCACAGTGAGGGAAAACAGCGTCTTCCATAAAATCGCTGAAACCAGGTGCAGTTATTGTTCGATTTCTATGTTGTGAATGCAGATATAAGTCTTATCCATCGGCCGTCTTACGCTTGCTGTCGCTTTTAACTGGATCGAGTAAGTAACTGCGAAATGTATGCTTAGAATTCTTCATCTTCACTAAAGTTCACAaggataaaaaataaacataaaaaaaagcaaagagacTAGAATATATTTGCATTCGTAGTTTACGCGTGCACGCTAACCTTTTAAAGACCACTAGATGTCGCTGTCGGACAATTACTCTGAGCTGCCAAAGTACACATGCACAGTACAAtgctcaaatttaatttaatttaatttaatttaatttaatttaatttaatttaatttcagagtttttaattatacatgcaGCTTTTAATGCTCACTTGAAACCCTTAAATTAAATTCAGCATAATTAACAATACATTTAGCTcgcaatgttaaattaaattacagtcaATTTAGagttattaattatacatacaGCTTTCGGCGCTCACCTGAAATTAAATTCAGCGCATTTCCAGCATCTAAAACCTGTTTTATGTCACAATGCATCTTTATTTctacaagcaaaaacaaacagaaagtcAAACAGACGTTACATGTTCGGGTGCACGGAAAGACAGCTGTTTACATGCAACAAGTTTTCTGCTTTTTCGTTACGTAGGCTCGGTTGCAATATAGTAAGTGCGGTAAACAAACGTTTAATTGTTAACTCGTTTGCATgcttgaatacattttatttgggGAAAACGGTGGCATTTGATCTGTTTTATCTTGTTGAGAGTGAAACAGAAAGGATTCgttcttgttgtttttcagtTCGGGATTAAAAGCatgctttcttttcatttgaagCGCTCTCACCTCTTGTCGCAGTCAATAATTAAGTTCTTTTTGCCTCTCTCAGGCTCTGTATTAAACTCCTCCAGCCTTTCGCAGCAGTCATTTTCCATAACAGTTTAACCACGTGTATGCAGACATTAATGCACCTGCCAAACAGTGCAGGACAAAACGCAGTGGGATTATTGCCTGAGAGGGGAAAATTATTTCCAGGAAGTGCCGTGGCTCTCGATGGACATGTTTACTGATGTATGACCTCCTGGTATTTGCCGCTAATTTGCCATTAATGGGTTCAAGCTCTGCTTGGAAATTAGCAAAGTTTTCTCGGAACGATTTCCATAAACAGTCTCCAGACTACTTTGAtcttttgctttgattactggAGTCATAGAGGCAAGCATCGGACTCTCTATACAATGCTTACACACATATACGGCCTTCTGACCTTTAGGTAAAGTTCACCGTGAATCCGTCAGCTTGAGAATGAACGGCAAATGTGATTTTGGGAAAGGCCAGTTGTTAAATGGCTCAGCCGCTTTCCTGGTTCAATCTATTCAGCAAATGCAATTTGCTAACAGCTTCCCAAAATAGCCAACAATCCCATTTCTTTTCGAATTAAACGAAGGGAGGGTAAAATGTCTTATTCGCTGAATGGCGCTCGAAATTGCATTATCAGTGGGGCTGTCCGCTAAACACCTTGCTAAATTAGTCGTTTAAATACAACCGGATTTAAAGGAGACCGGGCAACTATTTTCACTCCCATATATCCGCCTTTGTGTGCGAAAGGGTTCGGGTAACAAAGCACCGTTTTTCTCTCGCAGGGCGTTTCCTTGTCTACTTGAAAAAGTAGATTTTTCCTAAAGAGAGGCTTGAAAGAACAGTTCTAGTGGTAAtggccaaaaattaaaatttgctgaaaatgacaTCCGAGatacaaatgtgtttattcaCAGAAACAGGTTTGAAGAAACGTAGCATTTCGCAACTTGCTCCCCGAAGGAGCgagcggtgaatgggtgccgtcgggaaAGAGAGCAGATAGAAACGAGTCCATAAGAACACGGCCCTTTCTCTTCCGTGTCttgtgaagagaaaagctgCTTGTATGTGAGTGACAAaactctttctgacggcacccattcactgcaaaggatccatTGCCGAGCAAGTGACGGAAAGCTGTATTTCTCTAAATCTGGTAAAGAAGCAAATTCATCAGGAGCGCATTTTCAGAAGgctatttctttaattttatacTCACATCCGCCGTATTGTTGATAGATTGAGTATAATGTCACACCCCATCGtgcaataacaatatatttactaGTTACCATCCTAGTACAACCCTATCTTAATCTACtcctacactcttaaaaataaagtagttTCACAATGCCATAGAAGGACCTCTTTTTTCTAATTAGTTCAGTAAAGAAACCTTAACATTTAAGCTGCGCAAAAAGTTCTTTGTGGATAAAGAAAGGTCTTCAGATTattaaaaggtaagaaagaggcGGTCCTTTGGCTGAACGGTGTTTTTacgtatgtgtgtttttattctcgtcttctttttttattgcctGTGTGCTGTTGCAAGCGTACTTGGCAGTAAAGCGCTTTCTCacccatttattcattttgcgGTAGGTTACTGTATGCGAACGACGCAGCCTCTCTGTTTTGCTTCGCTCATCAGCGCTTAATTCGCAGATTATGTCACCGCATGACTAACCCACAACAACACCTCACGCAGAGATTGTGTAAAAGGAAAAAGTACCGTAATCAGTGTCCGGTGGGCCTAGATGCGTCATTTTGATTTTCGAACTGAAACTGAACAGGGGATCCATAATTCCCAGCGTGCGTTGAATACGACTTAATGCGGAGAGTCAATGTTGCATCTAATTCAACGctgaatttaaatgttatttgatgtgtttttgagaCACCGAACAGCATGACCTTTTCTAATTTAATCATAAGGAAATGACTATTTGGTATGCTGCTGTGTGTCGTTAGTTAGCAGGCTAGTGAGGGTTACGTAAAAATGAACATAACAACGATGCACACGCACGGAATCACCAATTTGGTCGGtatttcattacattaaatgtgtgGTAACAAATCTAATTGATTCACTAAAGACTGAGACGAACAATGACGTAAATATATCAATTTCAAACCCTTCGGTGAATGCCGGGCGGTGTCCTCTGCTTTGACATTAAGCGTTTGCATACGGCGTTTGAATATTTAGAAAAAGGACACTTGCAACCTCCTGCACCCTGAGAGATGGGTTGTCAGTAAACAACATCAACATACGGGCAGAGACGGCAAAATTGAAAAAGAAGGGGGTATGTTGACAAAGAGATAAAGAGTGGAACGACACTGTGATGAAACTGGTTTGTCAAGGCTGTGGCTAGTGGCAAATGAGTGactgaactcaaaacaaacactgGAATGCATATGACCTGAAAAAACGAACGGCCAGAACCTGTTGATGATGTGTCAACAATAAACAGTGATTTTGAGGATTGCTTTCGGGCCTGCTCGAACATTTTATGAGCGAGAAGAAATGAAAGGGTAAAAGGTGCACTCGTAAAGACGGTACGATCTATAGGTTTGAAGGAATTCGCTCGCATGCCGGCAAGGGCACAGTATTTATAGAGTCCAAAGTGCAACAGTAACtatttaatagaattttttcCCATTTGTTGAAGCTTCTGACTTAATCGTAATGTTTCAGAAAAGCAGTGAAAGGGATTTGGTAcctgggtgccgtcagaatgagagt

Function

NR:

description
PREDICTED: nuclear factor 7, brain-like

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234156.1 True 5698 mRNA 0.42 6 3902160 3908979

Neighbor

gene id symbol gene type direction distance location
LOC122333498 NA coding downstream 13682 3881900 ~ 3888478 (-)
mif4gdb mif4gdb,mif4gd,LOC107724678,LOC107553652,LOC107570710 coding downstream 20598 3877647 ~ 3881562 (-)
LOC122334199 NA coding downstream 27321 3866755 ~ 3874839 (-)
LOC122341930 LOC107750166,LOC107663479,LOC107655787,LOC107716258,LOC107721796,LOC107720837,LOC107721799,LOC107575760 coding downstream 55175 3831970 ~ 3846985 (-)
map2k4a LOC107695698,LOC107756562,LOC107570719,LOC108433489 coding downstream 73468 3814881 ~ 3828692 (-)
LOC122340995 rnps1,LOC107553655,LOC107673212,LOC107601591,LOC107716265 coding upstream 32961 3941940 ~ 3946465 (-)
LOC122341029 NA coding upstream 43840 3952819 ~ 3954039 (-)
LOC122341020 LOC107601567 coding upstream 53290 3962269 ~ 3964517 (-)
LOC122341012 LOC107576979,LOC107716248,LOC107673194 coding upstream 67355 3976334 ~ 3977339 (-)
LOC122340986 NA coding upstream 71168 3980147 ~ 3981915 (-)
LOC122342142 NA non-coding downstream 115295 3783737 ~ 3786865 (-)
G16815 NA non-coding downstream 280291 3621489 ~ 3621869 (-)
G16779 NA non-coding downstream 375312 3503008 ~ 3526848 (-)
G16780 NA non-coding downstream 376922 3475325 ~ 3525238 (-)
G16901 NA non-coding upstream 228139 4137118 ~ 4138203 (-)
G16926 NA non-coding upstream 325396 4234375 ~ 4277855 (-)
G16930 NA non-coding upstream 356232 4265211 ~ 4267492 (-)
G16933 NA non-coding upstream 406202 4315181 ~ 4315571 (-)
G16949 NA non-coding upstream 460746 4369725 ~ 4371084 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other downstream 38309 3847980 ~ 3863851 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other downstream 418711 3473444 ~ 3483449 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other downstream 582974 3314752 ~ 3319186 (-)
G16478 NA other downstream 1248130 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 1262069 2631782 ~ 2640091 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 75677 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 494118 4403097 ~ 4407697 (-)
G17131 trap1 other upstream 538401 4447380 ~ 4448881 (-)
G17133 trap1,LOC107573746 other upstream 541336 4450315 ~ 4453135 (-)
LOC122341034 NA other upstream 693572 4602551 ~ 4650642 (-)

Expression


Co-expression Network