LOC122341012 (LOC107576979,LOC107716248,LOC107673194)


Basic Information

Item Value
gene id LOC122341012
gene name LOC107576979,LOC107716248,LOC107673194
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3976334 ~ 3977339 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043234302.1
TCTTCACTAGATCTATCATCTGAGGGAATCAAGATGTTGGCTCTTCTCATTTTATCTGCTCTAGGACGGGATCACAGAGCTGATGGTACAAGAAATACGCTTCCACTGGATATGGCGCCAAATTCGGTTGATGATCAATATGAGGGTTGTAGAGAGAAAATGGCAGACTTGgtgaaaacaaaatatctgCAGATGGAAATGAGTAACTCAGAACTGTTTAAGAACACTTGGCATGACGCTGAAAAGAAAGCCAACAATCCAGAGGATGATTTGAAGCAGATTCATTCAGTCGCCCTTTATGTGTACACTAACAACAATTCTAATGTGTTTCGTGACTTTAATAATGCTGTTCGTGGTGAGAGACAAAAGTACAAAGACAAGACATTTACATGGTATTCACTTCACTTTCTGTTAACAGAAGCGACACACATTCTGAAGAAAACGCAAAATGATTGCTATTCAACTTATCGAGGTACTACAGTTGAATTCGATAAGGACTCTCTCAACAAAGAGATTCGTTTCGGCTCATTTACGTCCTCCTCTTCGGACCAAGCAGTAGCGAATAGTTTCGGACCTAGATCCTGTTTTGAAGTTCACACTTGTGAAGGCGTTTCTGTGATAAAATACTCAAAGTATCCCGATCAGAAAGAGGTGCTGATTCCTCCGTATGAGAAGTTCAAAGTCACTGCCGTCAAGACAAAAGGTCAGAAAGGTGCTTGGTGTGACACCGTGTTCACTTTGAAAAGCACTGGGAGAGTAAGTAACAGTAACTGTGGTGTTGTTGCAAAAATAGTTCAAGACAGGCAGaaaattttaatgattaaatctTAATTCAATTTTCCAGTTTACCTGCTTTGTCTTCATGGTCTTTCACATGTAACGCTGTGTATGTAAAATGAATAggcaaaaaaaagcatgctttaaCACTCTA

Function

NR:

description
PREDICTED: ecto-ADP-ribosyltransferase 5-like, partial

GO: NA

KEGG:

id description
K19977 ART5; ADP-ribosyltransferase 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043234302.1 True 931 mRNA 0.39 2 3976334 3977339

Neighbor

gene id symbol gene type direction distance location
LOC122341020 LOC107601567 coding downstream 11817 3962269 ~ 3964517 (-)
LOC122341029 NA coding downstream 22295 3952819 ~ 3954039 (-)
LOC122340995 rnps1,LOC107553655,LOC107673212,LOC107601591,LOC107716265 coding downstream 29869 3941940 ~ 3946465 (-)
LOC122340901 LOC107695670 coding downstream 67355 3902160 ~ 3908979 (-)
LOC122333498 NA coding downstream 87856 3881900 ~ 3888478 (-)
LOC122340986 NA coding upstream 2808 3980147 ~ 3981915 (-)
LOC122340658 cyp2k8,LOC107718556,LOC107553661,LOC107678270 coding upstream 14346 3991685 ~ 4001580 (-)
LOC122340758 cyp2k16,LOC107678266,LOC107718555 coding upstream 25395 4002734 ~ 4006487 (-)
LOC122340716 cyp2k21,LOC107553659,LOC107678268,LOC107742084,LOC107553662,LOC107718554,LOC107742071,LOC107678269,LOC107601586,LOC107695651 coding upstream 33725 4011064 ~ 4019711 (-)
LOC122340742 LOC107553662,LOC107553659,LOC107678269,LOC107742071,LOC107601586,LOC107742084,LOC107678268 coding upstream 43766 4021105 ~ 4024639 (-)
LOC122342142 NA non-coding downstream 189469 3783737 ~ 3786865 (-)
G16815 NA non-coding downstream 354465 3621489 ~ 3621869 (-)
G16779 NA non-coding downstream 449486 3503008 ~ 3526848 (-)
G16780 NA non-coding downstream 451096 3475325 ~ 3525238 (-)
G16901 NA non-coding upstream 159779 4137118 ~ 4138203 (-)
G16926 NA non-coding upstream 257036 4234375 ~ 4277855 (-)
G16930 NA non-coding upstream 287872 4265211 ~ 4267492 (-)
G16933 NA non-coding upstream 337842 4315181 ~ 4315571 (-)
G16949 NA non-coding upstream 392386 4369725 ~ 4371084 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other downstream 112483 3847980 ~ 3863851 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other downstream 492885 3473444 ~ 3483449 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other downstream 657148 3314752 ~ 3319186 (-)
G16478 NA other downstream 1322304 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 1336243 2631782 ~ 2640091 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 7317 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 425758 4403097 ~ 4407697 (-)
G17131 trap1 other upstream 470041 4447380 ~ 4448881 (-)
G17133 trap1,LOC107573746 other upstream 472976 4450315 ~ 4453135 (-)
LOC122341034 NA other upstream 625212 4602551 ~ 4650642 (-)

Expression


Co-expression Network