RNA id: XM_043234302.1



Basic Information


Item Value
RNA id XM_043234302.1
length 931
RNA type mRNA
GC content 0.39
exon number 2
gene id LOC122341012
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3976334 ~ 3977339 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTTCACTAGATCTATCATCTGAGGGAATCAAGATGTTGGCTCTTCTCATTTTATCTGCTCTAGGACGGGATCACAGAGCTGATGGTACAAGAAATACGCTTCCACTGGATATGGCGCCAAATTCGGTTGATGATCAATATGAGGGTTGTAGAGAGAAAATGGCAGACTTGgtgaaaacaaaatatctgCAGATGGAAATGAGTAACTCAGAACTGTTTAAGAACACTTGGCATGACGCTGAAAAGAAAGCCAACAATCCAGAGGATGATTTGAAGCAGATTCATTCAGTCGCCCTTTATGTGTACACTAACAACAATTCTAATGTGTTTCGTGACTTTAATAATGCTGTTCGTGGTGAGAGACAAAAGTACAAAGACAAGACATTTACATGGTATTCACTTCACTTTCTGTTAACAGAAGCGACACACATTCTGAAGAAAACGCAAAATGATTGCTATTCAACTTATCGAGGTACTACAGTTGAATTCGATAAGGACTCTCTCAACAAAGAGATTCGTTTCGGCTCATTTACGTCCTCCTCTTCGGACCAAGCAGTAGCGAATAGTTTCGGACCTAGATCCTGTTTTGAAGTTCACACTTGTGAAGGCGTTTCTGTGATAAAATACTCAAAGTATCCCGATCAGAAAGAGGTGCTGATTCCTCCGTATGAGAAGTTCAAAGTCACTGCCGTCAAGACAAAAGGTCAGAAAGGTGCTTGGTGTGACACCGTGTTCACTTTGAAAAGCACTGGGAGAGTAAGTAACAGTAACTGTGGTGTTGTTGCAAAAATAGTTCAAGACAGGCAGaaaattttaatgattaaatctTAATTCAATTTTCCAGTTTACCTGCTTTGTCTTCATGGTCTTTCACATGTAACGCTGTGTATGTAAAATGAATAggcaaaaaaaagcatgctttaaCACTCTA

Function


GO: NA

KEGG:

id description
K19977 ART5; ADP-ribosyltransferase 5

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006250532.1 lncRNA downstream 189469 3783737 ~ 3786865 (-) True LOC122342142
TU25026 lncRNA downstream 354465 3621489 ~ 3621869 (-) True G16815
TU24978 lncRNA downstream 449486 3503008 ~ 3526848 (-) True G16779
TU24980 lncRNA downstream 451096 3475325 ~ 3525238 (-) True G16780
TU25171 lncRNA upstream 159779 4137118 ~ 4138203 (-) True G16901
TU25199 lncRNA upstream 257036 4234375 ~ 4277855 (-) True G16926
TU25205 lncRNA upstream 287872 4265211 ~ 4267492 (-) True G16930
TU25204 lncRNA upstream 289364 4266703 ~ 4267492 (-) False G16930
TU25209 lncRNA upstream 337842 4315181 ~ 4315571 (-) True G16933
XM_043234315.1 mRNA downstream 11817 3962269 ~ 3964517 (-) True LOC122341020
XM_043234328.1 mRNA downstream 22295 3952819 ~ 3954039 (-) True LOC122341029
XM_043234278.1 mRNA downstream 29869 3941940 ~ 3946465 (-) True LOC122340995
XM_043234156.1 mRNA downstream 67355 3902160 ~ 3908979 (-) True LOC122340901
XM_043231153.1 mRNA downstream 87856 3881900 ~ 3888478 (-) True LOC122333498
XM_043234256.1 mRNA upstream 2808 3980147 ~ 3981915 (-) False LOC122340986
XM_043234265.1 mRNA upstream 2808 3980147 ~ 3981915 (-) True LOC122340986
XM_043234142.1 mRNA upstream 7317 3984656 ~ 3987409 (-) True LOC122340684
XM_043234141.1 mRNA upstream 14346 3991685 ~ 4001580 (-) False LOC122340658
XM_043234140.1 mRNA upstream 14346 3991685 ~ 4001580 (-) True LOC122340658
XR_006250503.1 other downstream 112483 3851352 ~ 3863851 (-) False LOC122341931
XR_006250494.1 other downstream 492885 3473444 ~ 3483449 (-) False LOC122341810
TU24952 other downstream 657270 3315438 ~ 3319064 (-) False LOC122333478
TU24533 other downstream 1322304 2649842 ~ 2654030 (-) True G16478
XR_006250470.1 other downstream 1336243 2631782 ~ 2640091 (-) False nup85
TU25103 other upstream 7328 3984667 ~ 3985667 (-) False LOC122340684
TU25102 other upstream 8901 3986240 ~ 3987431 (-) False LOC122340684
TU25236 other upstream 425758 4403097 ~ 4407697 (-) True G16953
TU25544 other upstream 470041 4447380 ~ 4448881 (-) True G17131
TU25560 other upstream 472976 4450315 ~ 4453135 (-) True G17133

Expression Profile