RNA id: TU24533


Basic Information

Item Value
RNA id TU24533
length 664
RNA type TUCP
GC content 0.36
exon number 2
gene id G16478
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2649842 ~ 2654030 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGGCTTTATGGTActtaattaaaatcaatacacgatttttttttttttttgatgaaagtaTTGATTTATTGTATGCATTTTCGGTTTGTCTTCAGTTGTCTGCCATTACAGTTTacgattaaataaaaatatatatattattatttatttatatttattaatttttatttatttattttttccccattaatttttttttctgaattttgtGCAGCGTCCTGTCTCCTTCAGAATGAAGCGTACAGATGACTCGCTGACAGTAACACCAGGAACACGCGTGGACTAAGAGCATGGCATCCATGAACGGGTGTGTCGCCGAACGACCTACATTCACGTCACACGCTCTGAACTCACCATGTTGCCGGGAGAGCCGTTATCGTAGACGATGGCGGGCTGGCATCGTCTCAGAGGAGCCGAGGATTCACCGCACAGGACGCCAGATGCTTCTCCACTGGTGGGTTGTTCCTCCGATGGGCATGAGGGTCGTCAGGTTCAGCAAAGATACTGGAGGCCATCTTGTTTTTGCGCGCAGGCTTCTCCTCGTCTGCACCGAAGGAAATATTGGAGGCTCCTCCAGGAGGACACAACACCCTACGAGACACAATGCCCAACAAATCAGTCACACACAGGAGCGAAAGGAACGGCGCACGCTGCGTGAAGGACA

Function

GO:

id name namespace
GO:0071855 neuropeptide receptor binding molecular_function
GO:0031841 neuropeptide Y receptor binding molecular_function
GO:0031843 type 2 neuropeptide Y receptor binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU24529 lncRNA downstream 3092 2645891 ~ 2646750 (-) False G16475
TU24530 lncRNA downstream 3092 2645891 ~ 2646750 (-) True G16475
TU24520 lncRNA downstream 43548 2606060 ~ 2606294 (-) True G16467
TU24517 lncRNA downstream 59780 2589789 ~ 2590062 (-) True G16464
TU24497 lncRNA downstream 61982 2584894 ~ 2587860 (-) True G16453
TU24943 lncRNA upstream 616046 3270076 ~ 3271309 (-) True G16753
TU24980 lncRNA upstream 821295 3475325 ~ 3525238 (-) True G16780
TU24978 lncRNA upstream 848978 3503008 ~ 3526848 (-) True G16779
TU24981 lncRNA upstream 863783 3517813 ~ 3523248 (-) True G16781
TU25026 lncRNA upstream 967459 3621489 ~ 3621869 (-) True G16815
XM_043235027.1 mRNA downstream 9751 2631782 ~ 2640091 (-) True nup85
XM_043235028.1 mRNA downstream 9752 2631782 ~ 2640090 (-) False nup85
XM_043235056.1 mRNA downstream 44431 2596687 ~ 2605411 (-) True cygb1
XM_043235019.1 mRNA downstream 71503 2565436 ~ 2578339 (-) True LOC122341565
XM_043235033.1 mRNA downstream 87695 2542845 ~ 2562147 (-) False LOC122341573
XM_043235065.1 mRNA upstream 11322 2665352 ~ 2668367 (-) True LOC122341599
XM_043235041.1 mRNA upstream 17627 2671657 ~ 2674787 (-) True LOC122341581
XM_043235042.1 mRNA upstream 24504 2678534 ~ 2687338 (-) False LOC122341582
XM_043235043.1 mRNA upstream 24504 2678534 ~ 2684207 (-) True LOC122341582
XM_043235038.1 mRNA upstream 46336 2700366 ~ 2705732 (-) True LOC122341577
XR_006250470.1 other downstream 9751 2631782 ~ 2640091 (-) False nup85
XR_006250471.1 other downstream 165618 2479128 ~ 2484224 (-) True LOC122341591
TU24448 other downstream 199639 2444068 ~ 2450203 (-) True G16421
TU24428 other downstream 226296 2333556 ~ 2423546 (-) False LOC122341602
TU24410 other downstream 287443 2303327 ~ 2362399 (-) True G16402
TU24952 other upstream 661408 3315438 ~ 3319064 (-) False LOC122333478
XR_006250494.1 other upstream 819414 3473444 ~ 3483449 (-) False LOC122341810
XR_006250503.1 other upstream 1197322 3851352 ~ 3863851 (-) False LOC122341931
TU25103 other upstream 1330637 3984667 ~ 3985667 (-) False LOC122340684
TU25102 other upstream 1332210 3986240 ~ 3987431 (-) False LOC122340684

Expression Profile