G16464


Basic Information

Item Value
gene id G16464
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2589789 ~ 2590062 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24517
AAAAGATTTATGGGCTAGTCATGATAGACTGAAGAAAACTAGAATAAACCAATAACTTAATAGCTTGCTTTAATGACAAAAGCCTTAATTGTGATGTAAATAATAGGAAATGGATGCacgattaaattaatttgaccCAAGATTGATGTTTTAAGATTGatatttaattcatgttaaACCTCGGATCACACACACTGTTGTgttgaaatattgtttttcccCTCTCTAGTTTTTTTGAATGCTCTTCACTCTAAATAAAATGCCTGATTCATTC

Function

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0002376 immune system process biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU24517 True 274 lncRNA 0.30 1 2589789 2590062

Neighbor

gene id symbol gene type direction distance location
LOC122341565 fbf1,LOC107751622 coding downstream 11450 2565436 ~ 2578339 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding downstream 27639 2542845 ~ 2562150 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding downstream 76487 2509235 ~ 2513302 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding downstream 154254 2427945 ~ 2435535 (-)
hook2 hook2,LOC107677331,LOC107696339 coding downstream 198678 2374613 ~ 2391111 (-)
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding upstream 6625 2596687 ~ 2605411 (-)
LOC122341599 LOC107751358 coding upstream 75290 2665352 ~ 2668367 (-)
LOC122341581 NA coding upstream 81595 2671657 ~ 2674787 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding upstream 88472 2678534 ~ 2687338 (-)
LOC122341577 LOC107696344 coding upstream 110304 2700366 ~ 2705732 (-)
G16453 NA non-coding downstream 1929 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 74128 2514767 ~ 2515661 (-)
G16413 LOC107393734 non-coding downstream 206711 2382153 ~ 2383078 (-)
G16403 LOC107678214,LOC107706618,LOC107581313 non-coding downstream 225220 2305249 ~ 2364569 (-)
G16401 LOC107696333,LOC107741349,LOC107749601,LOC107575050,LOC107575170 non-coding downstream 231624 2299037 ~ 2358165 (-)
G16467 NA non-coding upstream 15998 2606060 ~ 2606294 (-)
G16475 NA non-coding upstream 55829 2645891 ~ 2646750 (-)
G16753 NA non-coding upstream 680014 3270076 ~ 3271309 (-)
G16780 NA non-coding upstream 885263 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 912946 3503008 ~ 3526848 (-)
LOC122341591 NA other downstream 105559 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 139586 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 166243 2333556 ~ 2423546 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other downstream 215702 2314559 ~ 2374087 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other downstream 227390 2303327 ~ 2362399 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other upstream 41720 2631782 ~ 2640091 (-)
G16478 NA other upstream 59780 2649842 ~ 2654030 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 724690 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 883382 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1257918 3847980 ~ 3863851 (-)

Expression


Co-expression Network