LOC122341582 (LOC107696344,LOC107565151,LOC107672900)


Basic Information

Item Value
gene id LOC122341582
gene name LOC107696344,LOC107565151,LOC107672900
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2678534 ~ 2687338 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235042.1
TGGCGCCCGCAGCTGTTGTACAGCGTAATAAAATACAGtaatgtTCAGATTGCTGAAGCTCATGCAAACGGTGAAAATGGATTCACTCTCTGTTGAAGAGCCTTCTTGCAGTTTGCACAGAAAGACACTCAAGCTCTTCTGTCTGGAGGACAAACAGCCGGTGTGTTTAGTGTGTAGAGATTCAGAGACACACAACGAACACACATTCAGACCCATCGGGGAAGTCGTTTTATCATACAAGGAGGAGCTTAAAACAGTGTTGAAGTCCTTACGAATTAAAATTACACAAGGAGTAAAAATGAGAGAAGAGTTTGAGAAAACGGTTCAACACGTCAAGGTGAGGAAACAGCATCAGTCTCAAGCTGATCACACAGAGCATCAGATTAAACGGCAGTTTGAGGAGCTTCATCGGTTTCTCAGATATGAAGAAGAAGCTACAATCACTGCActgagggaggaagaggagcagaagaagaagatgatgaaggaGAAGCTGGAGGAGATCAACAGACACATCTCAGCTCTTTCACACACAATTAAAGACATGGAGGAGATGATGAAAGACAATGATGTCTGCTTTCTGAAGaagTTTCCGGTCTCGATGCAAAGAGTCCAGATCTCATCACAGCCGGATCCACAGACACCTTCTGGAGCTTTGATTCATGTGCCACGATACTTGGGCAACCTGTCCTTCAGAGTCTGGAAGAAGATGCAGGACATCGTCCAGAACACTCCTGTGATTCTGGACCCAAACACGGCAAATCCAGATCTCATCCTGTCTGAAGATCTGACCAGCGTGAGATACAGTGACAACAAACAACTTCTTCCTGATAATCCAGAGAGATTTGACTATTATTCCTGTGTTCTGGGTTCAGAGGGTTTTAATTCAGGAACATTTTGCTGGGACGTAGAGGTTAAAGGGAGTTCATCCTGGAGTCTTGGAGTCACTACAGCATCAAACCAGAGAAAGGGACGGGATTTCTTTAGCACTGATGTTTGGAGTGTGTGCCATGGATTATGTGAACCATCTGGTTTTCTTATTGACCAGGATCTTGatcgtgtgagagtgtgtctggaCTATGACGGAGGAACAGTGTCATTCTCTGATCCTGTAACtaacacacatctacacacattcacaaccTCCTTCACCGACACTGTCTTTCCATTCTTTTGTAGTATTTACCACCTGAGGATCTTACCGTATAGTTACAGTACTGTAATAGTCCGTAAACGTTACACCTGTAGCTCTAAATCAGTGAGAGTGcagtgaaataaaaactgcagAGCTTAATAACCATGCCCTGTACAGCTTTATTTAGTTAATCTCATCTGGTTATAGCATCTGATCAGGCTGCGTTATGCATCGCCTGATTAAGTGTCAATCAAATGATCATAAAACCTTGATTTAAACGTGGAATATATGAAAAAGGTTCTGATTTAgatcaataaatattaacatataata
>XM_043235043.1
AAAAGGGTTTTTTAACGGGTTTGGAGATTAGCTCCTAACTGAAAACATGCTAGTTCAATCCCAGATACTCTGCTGAACTCCTCACACAGATCTGTCAAGACAGGGGGGCTGTTTTCATGTATGACTACAAGCTGTCTAGAGTGGCAGACATGAGTTGTGTATTCCTTATGTTTCTTGTTCATCTGGAGCTCCAGATATTTCAGGACCAAACTGAGGATGGACCTAGTGAGTGGACAGCCATCTCGTAACTCGCTGAAGCCGTCTGAAGCTCCTGGGATCATAagctctaaaatattattttccacTTTTTCCAAAGGAACTATATCTTTAATTAAGAttgtaatcattattatttgtctCTCAATATAccctttttctgtcttttttggcttttttttttgtctgtttttttagacTTTTGAATTGTTTCTGCAGTTTTGAGTATGCGTGAGAAGATGTCTTTTAAGAAGGTCCATTTGACTTTCTTTGGTCTTTCTGCAAAGGTTAAACAGTGACACGGGTCACGGATGTTGTTTTGGCTCCTTTTCTCTGGGAATAGCTCCAGTAGCAAATTAAGGCGTTTGGCCAGAACCGTAGTGAAAATCAAATAATCCACATTGAATTGTTTTCTTCCACCTGATGCAGAGACACTTTCACTGAAACTTGAAGGTAATTTCTTGTATTTAATCAAAACGTTGAAAAACGTTTTTAAGAACTCTGTGGAGTAACAACGGTGATTCTTGTATGTTTGAACTCTTATGCCATCAGGTCCCGTGTGTCCAGAATCAGTTAAAGACTTGATCACATTCAGTATTTCTGCACCATTAATTTTTCCCGCTCTTTTGTCCGGTTCATACCGCTGTAATTGTGAAGCAACATTTGGTACCTCCATCACTGTGAGATACATCAGTAGAAGCAAATGATCTGAATCAGATTTTCGGATTTTGACATCTTTTATTTGTTCCAAATTGTCTTCACACAGAAGAAACATGTCTAATCTAGAAGAACTGCCATGCTGTTTCTCAGAATATGTGAACTTCCTTGACTCTTGGGTAAAAGTATGCCCAAGTATCCATTAGATTTAGAGAGGTAGTGAAATTTCTAAATGGGTCCCACAGCTGTGTATgcgatactttttttttctcagatgttCGATCACAGCTAAGATCGAGAACTGTGTTGAAATCTCCTCCAACCACGAGCACACCTCTGGCTGCCTCCCTCAGGTATCCCTGCAGTCTGTTTAGCATTTCTTTGTCATCTTTATGATTGTACACATTAACTAGAGTGAACAGCGCACCGTGAAGATAGCAGAAGAGTACGAGATACCCCCCACTATAATCCTCATCGTGCATAAGTACTCAAAAGGTACACCATCTTTTATCAGGATGGCCACTCCTCTGCTAGTAGAGTCACAGATCGTAAGAAACGATCGCCAGCCGTCAGGCTTTTCTAAAGGAGTTTCACTTTCAGGTCCAATGTTGGTCtcttgcaaaaagaaaatgtctgcCTTTTGCTCTTTTGAGAAACGGTCAACGCTTGGGTTTTTTTGTCTACAAATATTCCACGAGACAAAGCAAAGAGTTTGCTCTTTAGATGAAGCCATTATTTCAGTGAATCCTCTGTTGAGCaagtaaacataaatataaattcatgcCTGGTCTGTATGCATTGTTAGAAGACAAACTTAATCAAGGGAAAAAAGagattttacattgtaattaaatgctaaattaacacattaaatttAGAGCCAATTGAAAGGAATAAGTACATTTACTAATAATGAATTTCACTGAAAATAGTTTAATCTTACCTTTCCCACTGTACTAATCTCTCACAGCCTGCACCGTGTACTGTGTTGTCCGTACAGTATGTTTGCACATGTGACTTACTGACAATGATGTGTGGATGTAGAATACAATTGGGTAGGGCATCATACTTTAGTGTCTTTCCTTTCATTTAGGTCTGTTCACAAAGCTTTAtttcaaacacaacacacataaTTCATTGTTCTAGCAGACCAGTTTCACTCCAATTCATGTCTGAACATCCTACATGCATGCTGTGTGTATAGTATAGACTACTACATTTTCTAATCAATAACAAGTTCATTTCTCCTGACCATTTGTTTTTGGAGTTAAACAGATGTCTTTAAACAGAACATTAGATGTAATGACAGTGGCTTGTAAAAATACCATGTTCTTTCTTCCCTCCTTCGcctatttaaattaaaacaatatcaaTAAACATTAGAAATAGCAGGTCCGTATTTGatgttctttattttgtgcatgCTCTTCAGTGAACTGTGCTCTGTAAGTCGTTAGGAtgacaaaaagtttaaaaggtCGTTTTTAAGGTCTGCCTAATTGGTCTTGCTGGTGTAGAAATGACCCACTGGGGATCCAGATACCCATATAATGGTACAAAAGCTCTCCCTTCGGCAGTTCCTATTCAAAAGCAATCATTTTGATCTCACTTCAGTGAATAAACCGCCATGCTAAACCATGAGTTTTATCACCGAGGTgccatgtacatttttttacagcCCTACTGTCAGAGTAGGGCTATTCCCTCGCTTATAATTTACTTTGCTACTTAATCTACCGGTGTTCTCTGTTATTCATTGTTGTCTGCTCGGCAGACCCTGTGTGCTTCCCTTCAgggttttgttttacttttgattGTTAATAAAGAACTTGAGATGTCAAGTGTGTGACCAGTTGATTTCAATCTATTCTGTGCTACATCCAGCACCActatcattttaaagttttactgTAGGCCTGTAACTTAAAGAAATTCTAGTGTTACTGTCTGACCTGCTGCACAACATACCTAACACTGATCCACCCTCTTAAAACACTTACCAGGAACTGATCTCACCGCTTTCTGACGCTTTTTACAACATCTCTATACAATCAGATAGGAATCGAAGATCAGTGGAGAATAAAGATGTTTATTTCAGAACAGAAAGGCGatgtttccatttaaaattttgttgttttgcattttaaagtaatgtTCAGATTGCTGAAGCTCATGCAAACGGTGAAAATGGATTCACTCTCTGTTGAAGAGCCTTCTTGCAGTTTGCACAGAAAGACACTCAAGCTCTTCTGTCTGGAGGACAAACAGCCGGTGTGTTTAGTGTGTAGAGATTCAGAGACACACAACGAACACACATTCAGACCCATCGGGGAAGTCGTTTTATCATACAAGGAGGAGCTTAAAACAGTGTTGAAGTCCTTACGAATTAAAATTACACAAGGAGTAAAAATGAGAGAAGAGTTTGAGAAAACGGTTCAACACGTCAAGTCTCAAGCTGATCACACAGAGCATCAGATTAAACGGCAGTTTGAGGAGCTTCATCGGTTTCTCAGATATGAAGAAGAAGCTACAATCACTGCActgagggaggaagaggagcagaagaagaagatgatgaaggaGAAGCTGGAGGAGATCAACAGACACATCTCAGCTCTTTCACACACAATTAAAGACATGGAGGAGATGATGAAAGACAATGATGTCTGCTTTCTGAAGaagTTTCCGGTCTCGATGCAAAGAGTCCAGATCTCATCACAGCCGGATCCACAGACACCTTCTGGAGCTTTGATTCATGTGCCACGATACTTGGGCAACCTGTCCTTCAGAGTCTGGAAGAAGATGCAGGACATCGTCCAGAACACTCCTGTGATTCTGGACCCAAACACGGCAAATCCAGATCTCATCCTGTCTGAAGATCTGACCAGCGTGAGATACAGTGACAACAAACAACTTCTTCCTGATAATCCAGAGAGATTTGACTATTATTCCTGTGTTCTGGGTTCAGAGGGTTTTAATTCAGGAACATTTTGCTGGGACGTAGAGGTTAAAGGGAGTTCATCCTGGAGTCTTGGAGTCACTACAGCATCAAACCAGAGAAAGGGACGGGATTTCTTTAGCACTGATGTTTGGAGTGTGTGCCATGGATTATGTGAACCATCTGGTTTTCTTATTGACCAGGATCTTGatcgtgtgagagtgtgtctggaCTATGACGGAGGAACAGTGTCATTCTCTGATCCTGTAACtaacacacatctacacacattcacaaccTCCTTCACCGACACTGTCTTTCCATTCTTTTGTAGTATTTACCACCTGAGGATCTTACCGTATAGTTACAGTACTGTAATAGTCCGTAAACGTTACACCTGTAGCTCTAAATCAGTGAGAGTGcagtgaaataaaaactgcagAGCTTAATAACCATGCCCTGTACAGCTTTATTTAGTTAATCTCATCTGGTTATAGCATCTGATCAGGCTGCGTTATGCATCGCCTGATTAAGTGTCAATCAAATGATCATAAAACCTTGATTTAAACGTGGAATATATGAAAAAGGTTCTGATTTAgatcaataaatattaacatataata

Function

NR:

description
PREDICTED: tripartite motif-containing protein 35-like

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235042.1 False 1468 mRNA 0.43 7 2678534 2687338
XM_043235043.1 True 4434 mRNA 0.39 6 2678534 2684207

Neighbor

gene id symbol gene type direction distance location
LOC122341581 NA coding downstream 3747 2671657 ~ 2674787 (-)
LOC122341599 LOC107751358 coding downstream 10167 2665352 ~ 2668367 (-)
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding downstream 73123 2596687 ~ 2605411 (-)
LOC122341565 fbf1,LOC107751622 coding downstream 100195 2565436 ~ 2578339 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding downstream 116384 2542845 ~ 2562150 (-)
LOC122341577 LOC107696344 coding upstream 13028 2700366 ~ 2705732 (-)
LOC122341579 NA coding upstream 18419 2705757 ~ 2709504 (-)
rbfox3b LOC107719784,LOC107695689,LOC107751640,LOC107696360,LOC107601602 coding upstream 25620 2712958 ~ 3378014 (-)
nog1 nog1,LOC107710974,LOC107695666,LOC107718944,LOC107567560,LOC107601571,LOC107696324 coding upstream 749348 3436686 ~ 3451093 (-)
hlfa hlf,LOC107710981,LOC107718936 coding upstream 840399 3527737 ~ 3543412 (-)
G16475 NA non-coding downstream 31784 2645891 ~ 2646750 (-)
G16467 NA non-coding downstream 72240 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 88472 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 90674 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 162873 2514767 ~ 2515661 (-)
G16753 NA non-coding upstream 582738 3270076 ~ 3271309 (-)
G16780 NA non-coding upstream 787987 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 815670 3503008 ~ 3526848 (-)
G16781 NA non-coding upstream 830475 3517813 ~ 3523248 (-)
G16815 NA non-coding upstream 934151 3621489 ~ 3621869 (-)
G16478 NA other downstream 24504 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 38443 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 194304 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 228331 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 254988 2333556 ~ 2423546 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 627414 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 786106 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1160642 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 1297318 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 1715759 4403097 ~ 4407697 (-)

Expression


Co-expression Network