LOC122341579


Basic Information

Item Value
gene id LOC122341579
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2705757 ~ 2709504 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235040.1
CAGACGCTTTTTGAGTTTCACTACCATTCACTGAGATTGCCGTGAAAATGGCTTCATTAAATGTTTCTGCAGAAGAACTTTCTTGTCCCGTGTGCTGTGAAATCTTCAAGGATCCTGTTGTTTTATCGTGTAGTCACAGTTTCTGCAAGGAGTGTCTTCAACGGTTCTGGAGAACCAAGGAAACTCAGGAGTGTCCCGTCTGCAGGAGAAGATCCTCGAAAGAACAGCCGCCTCTTAATCTCGCATTAAAAAACTTGTGCGAGTCGTTCCTGAAGCAAAGAAACGGTTCGTCGGGATCTGAGGAGATCTGTGGTGTACACCGAGAGAAACTCAAGCTCTTCTGTCTGGAGGACGAACAGCCGGTGTGTTTAGTGTGTAGAGATTCACAGAAACACATCAGTCACACATTCAGACCCATCGGGGAAGCCGTTTCATCGTATAAGGAGGAGCTCAAAACGGCACTGACATCCttacaacaaaaaattacatgTGGAGGGAAAATAAAAGAAGAGTTTGAGAAAACAACTGAACACATCAAGTCTCAAGCTGATCACACAGAGAGTCAGATTAAACAGCAGTTTGAGAAGCTTCATCGGTTTCTCAGAGATGAAGAAGAAGCTACAATCACTGCActgagggaggaagaggagcagaagaagaagatgatgaaggaGAAGCTGGAGGAGATCAACAGACACATCTCAGCTCTTTCAAACACAATCAAAGACATGGAGGAGATGATGAAAGACAATGACGTCTGCTTTCTGAAGaagTTTCCGGTCTCGATGGAAAGAGTCCAGATCTCCTCACAGCCGGATCCACAGATACCTTCTGGAGCTTTGATTCATGTGCCACGATACTTGGGCAACCTGTCCTTCAGAGTCTGGAAGAAGATGCAGGACATCGTCCAGAACACTCCTGTAATTCTGGACCCAAACACGGCTTATCCACATCTCGTCCTGTCTGAAGATCTGACCAGCGTGAGATGGgctgacaaaaaaacagttcCTAATAATCCAGAGAGATTTAATGATTATCCATGTGTTTTGGGTTCAGAGGGTTTTAACTCAGGGACACACAGCTGGGACGTGGAGGTCAAAGAGAGTTTATGCTGGAGTCTTGGAATAACTACAGCATCGAACCAGAGAAAAGGGCAtgatttctttaataataatgatgtctGGAGTGTGCAGTATGATCAGTATGGACTGTATGAACGCTCTAGTTTTTCTGTTAAACAGAAGCTTaagcgtgtgagagtgtgtctggaCTATGACGGAGGAACAGTGTCTTTCTCTGATCCTGTAACtaacacacatctacacacattcacaaccTCCTTCACCGACACCATCTTCCCGTTCTTTCATAGTCTTTCCCCTCTGAGGATCTTACCGTATAGTAGTCAGTAAGCGTTACACCTATAAGTCTGGATCTTCTTGTCTTCTTtgttaaattcataaataaatgttggctttttctttctgtagcAATTTATTGGTTAGTTACCATTTGCTCAATTTTGTGGTATTTACCCTTTACTCATCAATGCTGTGTGGTTTTACCAACTCCCCGATCTCCtaaaatgtctatatattttGTGCTTGTTGAAGCAAATTCTTAGTGTTACTGGCATTCACTAAAGGACTCACTCTTATAGAAGAAATTGTGATCTCTTAAGCTTATCTTAACAGATGTGTGATTGGGATTCGGCGCCATTCTCTGAATAAAATGTAGGACTAAtgctattttaatgcattcagaATTATAAGTTGGATTCTCATGCTGAACATGGccaaagtttaaaaagaaaaaaaactggacCTATTTGTGTAagtttggagttttattttttctatagtATGATGTAGTGAGGTAAAACCTTTCAATGTTTGGGATGCTAATTAGGTTGtaagtaattaattaacattGGTCAAAATGAGTGagagtttgttttgctttattctgcaaaataaagtgcagTGGAAAGAAAATGACGCTTTAACGAAAATGTGAAGTCAGTTCAACCTGACATTCAGAAGGTCTCATGCCCTATTAGCCTCCAGAGCGAGAGCTTTGAAGGGTTGACGGGTGTTGGGGATCAAACTGTTTCTTCAAGTGCCCACACGGGGGCGCCGTCATCATGTAACGAATCAGCTCAAAGGATCAGGGATCCATCCGTCGAACCATTTAAAATCCTTCATTCCGAAGGGCCCTTGAAAGTGGCCAGTTCTGAGCGCTTCCGTTTGGAACAACCCTTCAATGTGGCGGCCATGATTGTTTCACTCTGAAGTGCCCTTCGGAGGGCGATGTATCCTAATTGGGATGCACCAAGCATCTTATAAACAGGGCGCTCGTGGTCAGAGAAGTCCATCTAGTGCAATGGTTCTCAACTCCAGTCCTCGGAGCCCACCGCTCTGCACGTCTCATATTTAATacacctgattcagataatCACCTACTTAGGAGAGAATCCACGATACAACTAGGAAACTCGTTTTAATACCAGTGTTTTTGAGTTGGGCGGGTCGTAAACTTTAAACGGGGTGGAGGGGACAACCATTGCTGCTGTCAATGCTGTTCTCGCATCGACTACATCCCATTGTCTTGTAGCTGATGTAGGGTATTTGTAGACTAGATATGAACTATCATTTGAAGCATAAACTgtgaaataatgtaatgtatttgacCTAAATTCCAGAATTGTCAGCAAACTCCATGTATAGCATGGTGAGTGTTTATATGACTGTCAAACAGGGTGTcctacattttattcattcttgAATACGGCAAGCTCATAATCATGACTTCATAAGTGTCTATGGGGACATTTGCATatgtaag

Function

GO: NA

KEGG:

id description
ko03070 Bacterial secretion system

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235040.1 True 2844 mRNA 0.42 6 2705757 2709504

Neighbor

gene id symbol gene type direction distance location
LOC122341577 LOC107696344 coding downstream 25 2700366 ~ 2705732 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding downstream 18419 2678534 ~ 2687338 (-)
LOC122341581 NA coding downstream 30970 2671657 ~ 2674787 (-)
LOC122341599 LOC107751358 coding downstream 37390 2665352 ~ 2668367 (-)
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding downstream 100346 2596687 ~ 2605411 (-)
rbfox3b LOC107719784,LOC107695689,LOC107751640,LOC107696360,LOC107601602 coding upstream 3454 2712958 ~ 3378014 (-)
nog1 nog1,LOC107710974,LOC107695666,LOC107718944,LOC107567560,LOC107601571,LOC107696324 coding upstream 727182 3436686 ~ 3451093 (-)
hlfa hlf,LOC107710981,LOC107718936 coding upstream 818233 3527737 ~ 3543412 (-)
foxk2b LOC107695695,LOC107710983,LOC107718935,LOC107696365 coding upstream 877137 3586641 ~ 3607128 (-)
LOC122333516 LOC107695639,LOC107696327,LOC107718940,LOC107571536 coding upstream 904448 3613952 ~ 3616491 (-)
G16475 NA non-coding downstream 59007 2645891 ~ 2646750 (-)
G16467 NA non-coding downstream 99463 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 115695 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 117897 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 190096 2514767 ~ 2515661 (-)
G16753 NA non-coding upstream 560572 3270076 ~ 3271309 (-)
G16780 NA non-coding upstream 765821 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 793504 3503008 ~ 3526848 (-)
G16781 NA non-coding upstream 808309 3517813 ~ 3523248 (-)
G16815 NA non-coding upstream 911985 3621489 ~ 3621869 (-)
G16478 NA other downstream 51727 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 65666 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 221527 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 255554 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 282211 2333556 ~ 2423546 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 605248 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 763940 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1138476 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 1275152 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 1693593 4403097 ~ 4407697 (-)

Expression


Co-expression Network