LOC122341599 (LOC107751358)


Basic Information

Item Value
gene id LOC122341599
gene name LOC107751358
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2665352 ~ 2668367 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235065.1
TTGAACAGGAAGAGACTGACTTATTTCTCTTTTTCGTCATACTGACTGCTCTTTATGTCtgtgaaagattaaaaaagaaacgtGAAGAAGGAAGATAAACCCTCTGAAGAATTATTCAGTCGTTTGTTTCTGAATAGACAGCTGATTTTTGTAAGTGATAGGTGGAGCTCAAATGGCTTCCCTATCGGAAGATGTTTTGTGTCCCGTGTGCCGTGAAATCTTCAAGGATCCTGTTGTTTTATCGTGCAGTCACAGTTTCTGCAAAGAGTGTCTTCAACGGTTCTGGAGAACCAAGGAAACTCAGGAGTGTCCCGTCTGCAGGAGAAGATCCTCGAAAGAGGAAATTCCTCCTAATCTGGTGTTAAAAAACTTGTGCGAGTCGCTCCTGAAGGAGAGAAACGAGAGGTATTCATCTGGATCTGAGGAGATCTGTGGTGTACACCGAGAGAAACTCAAGCTCTTCTGTCTGGAGGACAAACAGCCGGTGTGTTTAGTGTGTAGAGATTCACAGAAACACGTCAGTCACACATTCAGACCCATCGGGGAAGCCGTTTCATCGTATAAGGAGGAGCTCAGTACCACACTTAAGTCCTTTCAAGAGAAATGTAAACatagtgaaaaaaagaaagatgagtTTGAGGAAACAATTCAATACATCAAGTCTCAAGCTGATCACACAGAGAGTCAGATTAAACAGCAGTTTGAGAAGCTTCATCGGTTTCTCAGAGATGAAGAAGAAGCTACGATCACTGCActgagggaggaagaggagcagaagaagaagatgatgaaggaGAAGCTGGAGGAGATCAACAGACACATCTCAGCTCTTTCACACACAATTAAAGACACAGAGGAGATGATGAAAGACAATGATGTCTGCTTTCTGAAGaagTTTCCGTTCTCGATGGAAAGAGTCCAGATCTCATCACAGCCGGATCCACAGACACCTTCTGGAGCTTTGATTCATGTTCCACGATACTTGGGCAACCTGTCCTTCAGAGTCTGGAAGAAGATGCAGGACATTCCTCCTGTGGTTCTGGATCCAAACACGGCTCATCCACGTCTCGTCCTGTCTGAAGATCTTACCAGCGTGAGATACAGCAGTGACAAACTGCTCCCCGATAATCCAGAGAGATTTGACAAGTCATACTGTGTCGTGGGTTCAGAGGGTTTTAACTCAGGGACACACAGCTGGGACGTGGAGGTTAAAGACAGTCGTTCCTGGAGTCTTGGAGTAACTACAGCATCAATCCAGAGGAAGGGTTTCATTTCTCTTACTGATGGTGTCTGGACTGTGCAGTTCGGACTAAATAAATGGGCTGGCTTTGGTGTTGACCAGGATCTTGatcgtgtgagagtgtgtctggaCTATGACGGAGGAACAGTGTCTTTCTTTGATCCTGTAACtaacacacatctacacacattcacaaccaCCTTCACCGACACTGTCTTACCTTTCTTCTGGTGTTATGGATTTTCCTCTCTAAAGATCTTACCGTTCAACAGTCAGTAATCATTTCACCTGTAGGTCTGGATCTTCCTGTTTTCATCATGGGTAACAGTGCTGTTGAACTGTGTATCAGTGCAGCTGTGATCTGATCACATGACTGATATCTAGCACTACAGACGCACTTTCATATTTCTTTAAGTGATTAATGTATCTTAAAGATTTCACAATCTTAAagaccagatttttttttcccccaaacaaAGCCAAAGCAGGACTGAGTAGTGCAAATTAAGTGAACATATCATACATCGCAGGTACCAATAGTTGCCTTTTAATTGTtccaaaaataatgaatacttGTAAAATACTTGTAGAAttctgtacagaaaaaaaaaaatattacaaagctGATAGCCTAACGTCAGTGTAATTCATTAACTTGTGCAAATGTAGTGCAGCCTAAATGTTTTAGTCACACAGTCCCAGTCCTCAGtgaagcatttttcttttaaaatatttttaaacaattatattgtTCACTTAATCCTGTAAAATAATAGCATAATATGCACATGTTGCTGCACTGTAACATCACTTGttaaaaacctaataaaaagcACTACAGTGGA

Function

NR:

description
PREDICTED: nuclear factor 7, brain-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235065.1 True 2085 mRNA 0.41 6 2665352 2668367

Neighbor

gene id symbol gene type direction distance location
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding downstream 59941 2596687 ~ 2605411 (-)
LOC122341565 fbf1,LOC107751622 coding downstream 87013 2565436 ~ 2578339 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding downstream 103202 2542845 ~ 2562150 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding downstream 152050 2509235 ~ 2513302 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding downstream 229817 2427945 ~ 2435535 (-)
LOC122341581 NA coding upstream 3290 2671657 ~ 2674787 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding upstream 10167 2678534 ~ 2687338 (-)
LOC122341577 LOC107696344 coding upstream 31999 2700366 ~ 2705732 (-)
LOC122341579 NA coding upstream 37390 2705757 ~ 2709504 (-)
rbfox3b LOC107719784,LOC107695689,LOC107751640,LOC107696360,LOC107601602 coding upstream 44591 2712958 ~ 3378014 (-)
G16475 NA non-coding downstream 18602 2645891 ~ 2646750 (-)
G16467 NA non-coding downstream 59058 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 75290 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 77492 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 149691 2514767 ~ 2515661 (-)
G16753 NA non-coding upstream 601709 3270076 ~ 3271309 (-)
G16780 NA non-coding upstream 806958 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 834641 3503008 ~ 3526848 (-)
G16781 NA non-coding upstream 849446 3517813 ~ 3523248 (-)
G16815 NA non-coding upstream 953122 3621489 ~ 3621869 (-)
G16478 NA other downstream 11322 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 25261 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 181122 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 215149 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 241806 2333556 ~ 2423546 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 646385 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 805077 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1179613 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 1316289 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 1734730 4403097 ~ 4407697 (-)

Expression


Co-expression Network