G16753


Basic Information

Item Value
gene id G16753
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3270076 ~ 3271309 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24943
AATTAGCTTTAGTAACGTCCAGAATTCAAACTGTTATAAAGTAATGCAATAGTCCTGGATTTAGATGCAGACATACTTTGTATTTCAGGGTATTTGGCCATGAGCAGAAGACCCCAGCGCAGTGTTGTGGCCGTGGTGTCGGTACCAGCACCAAATATGTTGTTCATTGTATAGTATAAATTCATCGAATTGTAGAAAGAGTCTGTTTTGCCAGATTCCTGCAGAAATGATGAGGCCAAGAAAGTGACGAGTCAGAATGCAGTCGTGAATCTATTATCTAAAGCTACAGGCAGTACCTTGTCTTTTTGCTGTCGTATCAGGAAACATTCAGCGATTCCTTTGGGGTCCTGAGGGTTTATAGTCTTCCTCAGGCCATTTATTATTTCCTCATTTTGCCTTATGGTTTCATTGACGTTGCTCACGATGCGTTTCCGATTCGCCACAAGAGGACGGATCCAAGGAAACATGTTGACCTGAACTGAAGCTGATCCGGTTAACCTCATGTTTTCATAAGATCGTTTAACCATGCGATGTAGATTAGTGTTGCTATATTCGAATCTGGTGTTGTAGACAATGGCAGAGATGACGTTTGAGACAGCCATGGCCATCGGTAGAGTTGTTTCAAATGGTTTTCCTGCACATGAACAAGATGTCAATATTTAAATCTGTTTCAGTCACATCATCGGCTTTGCAGACTTACCCATATATTTCGCAAATTCCTCTTTTAAGCATTGCGATTCTTCAATGATAATCTCTTCGCTTCTTTTCTTGCCCATTCCAAAGTCTCGCAGGCTTGAAAGAGCAAAGCGTCTCATTTCCCTCCAGTTTTCACCGTTGGAAAATGCAATCCCATCCCTTGTTGAAATCATGAAATATGGGAGTAACATCTCGGTCTCCAAACTCCTCTGAAAGGTGTACTAGCGCCTGCTTGACAGCCTTGTATCCTGACAATATCACCACCTTTCTGGGGCCCATGTGCACCGTGTAAACCGACCCATACTGTTTTGACAGCTGTAAGACAGAGAAGATGGAGCTAGATTGGCATCACCTTGCCTGTGCTC

Function

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU24943 True 1061 lncRNA 0.33 3 3270076 3271309

Neighbor

gene id symbol gene type direction distance location
LOC122341579 NA coding downstream 560572 2705757 ~ 2709504 (-)
LOC122341577 LOC107696344 coding downstream 564344 2700366 ~ 2705732 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding downstream 582738 2678534 ~ 2687338 (-)
LOC122341581 NA coding downstream 595289 2671657 ~ 2674787 (-)
LOC122341599 LOC107751358 coding downstream 601709 2665352 ~ 2668367 (-)
nog1 nog1,LOC107710974,LOC107695666,LOC107718944,LOC107567560,LOC107601571,LOC107696324 coding upstream 165377 3436686 ~ 3451093 (-)
hlfa hlf,LOC107710981,LOC107718936 coding upstream 256428 3527737 ~ 3543412 (-)
foxk2b LOC107695695,LOC107710983,LOC107718935,LOC107696365 coding upstream 315332 3586641 ~ 3607128 (-)
LOC122333516 LOC107695639,LOC107696327,LOC107718940,LOC107571536 coding upstream 342643 3613952 ~ 3616491 (-)
LOC122341986 pirt coding upstream 347034 3618343 ~ 3620127 (-)
G16475 NA non-coding downstream 623326 2645891 ~ 2646750 (-)
G16467 NA non-coding downstream 663782 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 680014 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 682216 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 754415 2514767 ~ 2515661 (-)
G16780 NA non-coding upstream 204016 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 231699 3503008 ~ 3526848 (-)
G16781 NA non-coding upstream 246504 3517813 ~ 3523248 (-)
G16815 NA non-coding upstream 350180 3621489 ~ 3621869 (-)
LOC122342142 NA non-coding upstream 512428 3783737 ~ 3786865 (-)
G16478 NA other downstream 616046 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 629985 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 785846 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 819873 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 846530 2333556 ~ 2423546 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 43443 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 202135 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 576671 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 713347 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 1131788 4403097 ~ 4407697 (-)

Expression


Co-expression Network