G16781


Basic Information

Item Value
gene id G16781
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 3517813 ~ 3523248 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24981
accccacacacatacaccccacaccccacacacacacacactttttcctGAATCTCTTAAAAGATGCCTAACGACGACGATGAAGTCGTGTGACTGCGGTGCAGTTCATTTAGCTTTTAACCCATGAATATTATCACGGTGACCAAAAACGCCCGCATCATAAATGTTTGTCGTCACAGAGCTGCAGAAACCCAACAGCTAAAGGCATGCTGGGAGTTGTACTCGTCTGAGTGTAACGGCTGCTGCTGAACGCAAGGTGGAGTCGCTGTCTGCTTTCGTCTTTGAATCGAACGTCACACAAACCCCAAGCAGAGGTTATTAACCGTGATTCACAGCCTACATGGAAGAGTGACTCTCACACGCTCAAAActttatgaaaaatgaaaaatttgatttttaatattagtattgCTTGTAAtgcagccaaaaataaaaataaataaaacattaacagttAATGTAAGTCGATTACATTAACTGttaacactacaaaaaaaaggggaaaaaaagtatttataattaTCTTATTAACtcatgaattataataatttcatatatatatttatttatattaaatgcctatgcatgtatttatttttagtaaaaaaataaaaccaagacACACAAAGactctaaaattaaataaataaataataataataataaatatataaaattgcgaatattaataaatactataatactagGACAATTTTcccccaaaaaattaaataaaatagagtaaaaaaattaataaaaccaaGACACACAAAGActaaaattaaagctaaaattaaaaaaataaataataatgttttgaaaaaaaaatatataaacacgaAAATGTCTTTAGATACAAATGTTATCACCACGGCATTTCTACCTACCAAAGATCGAATGAAAGTCAGTTTGTGTTCATTCTGAGCCGTCTTTCACGACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24981 True 941 lncRNA 0.32 2 3517813 3523248

Neighbor

gene id symbol gene type direction distance location
nog1 nog1,LOC107710974,LOC107695666,LOC107718944,LOC107567560,LOC107601571,LOC107696324 coding downstream 66720 3436686 ~ 3451093 (-)
rbfox3b LOC107719784,LOC107695689,LOC107751640,LOC107696360,LOC107601602 coding downstream 139799 2712958 ~ 3378014 (-)
LOC122341579 NA coding downstream 808309 2705757 ~ 2709504 (-)
LOC122341577 LOC107696344 coding downstream 812081 2700366 ~ 2705732 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding downstream 830475 2678534 ~ 2687338 (-)
hlfa hlf,LOC107710981,LOC107718936 coding upstream 4489 3527737 ~ 3543412 (-)
foxk2b LOC107695695,LOC107710983,LOC107718935,LOC107696365 coding upstream 63393 3586641 ~ 3607128 (-)
LOC122333516 LOC107695639,LOC107696327,LOC107718940,LOC107571536 coding upstream 90704 3613952 ~ 3616491 (-)
LOC122341986 pirt coding upstream 95095 3618343 ~ 3620127 (-)
LOC122342169 LOC107695697,LOC107696366 coding upstream 112699 3635947 ~ 3711514 (-)
G16753 NA non-coding downstream 246504 3270076 ~ 3271309 (-)
G16475 NA non-coding downstream 871063 2645891 ~ 2646750 (-)
G16467 NA non-coding downstream 911519 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 927751 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 929953 2584894 ~ 2587860 (-)
G16815 NA non-coding upstream 98241 3621489 ~ 3621869 (-)
LOC122342142 NA non-coding upstream 260489 3783737 ~ 3786865 (-)
G16901 NA non-coding upstream 613870 4137118 ~ 4138203 (-)
G16926 NA non-coding upstream 711127 4234375 ~ 4277855 (-)
G16930 NA non-coding upstream 741963 4265211 ~ 4267492 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other downstream 34364 3473444 ~ 3483449 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other downstream 198627 3314752 ~ 3319186 (-)
G16478 NA other downstream 863783 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 877722 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 1033583 2479128 ~ 2484230 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 324732 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 461408 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 879849 4403097 ~ 4407697 (-)
G17131 trap1 other upstream 924132 4447380 ~ 4448881 (-)
G17133 trap1,LOC107573746 other upstream 927067 4450315 ~ 4453135 (-)

Expression


Co-expression Network