G16475


Basic Information

Item Value
gene id G16475
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2645891 ~ 2646750 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24529
gagaatattttattttaacaagagATTAGACAATACAGACAGATGCTTGACTTGTCTGAAACATGAACTCCCTCGTTCGTACTCGAGTCAAAACATGTTTAACACAAGTTACGCACTGTACATGaccactacaaaaaaaaataaaaagttgtaaaaCCAATTGGTCTGAATGGAAAACAGAAACTCAATCTGAACCGGCTGCAGGTTCGTCTGCTTAAAGCGCAGCAGAGCACTTCCTGAAACGAGATTTCGAAAGAAAAGGCCCGCGTGCTCGTGTCCGGGACCGGAACGAAACCCTGAACCCGCGCACGCGGCTCTCCTCCTCAATGATTGTTAAGGGGAAACGTGTATTAGTTGGTCTGTACAGAGATGATGGTCTAGACTCGGGCTTGACACGGCAGATTTTACGGCAATCAACAATCCCAATGTAATAATTACTGTAGCGGAAACCCTTATGTacaaaacgaaagaaaaacatgatgaaCTGAAAACACTATACAACAGCAGTTACAGATGACCATGAGGAGAAccaggaacagagagagagcgatagagagacatagagagagagagagagagatagatagagagcgatagagagacatagagagatagagagagagagagagagatagagagcgatagagagacatagagagatagagagagagagatagatagagagagagagatagagagagacggGCCGGGGGTCGCTAGAGTCGTCTGATTCAGATGTGTCCTCCTGTCTGTTGCTGGAAAACGTCGATTGTGTCTTCATCCTCCATTTCCAA
>TU24530
gagaatattttattttaacaagagATTAGACAATACAGACAGATGCTTGACTTGTCTGAAACATGAACTCCCTCGTTCGTACTCGAGTCAAAACATGTTTAACACAAGTTACGCACTGTACATGaccactacaaaaaaaaataaaaagttgtaaaaCCAATTGGTCTGAATGGAAAACAGAAACTCAATCTGAACCGGCTGCAGGTTCGTCTGCTTAAAGCGCAGCAGAGCACTTCCTGAAACGAGATTTCGAAAGAAAAGGCCCGCGTGCTCGTGTCCGGGACCGGAACGAAACCCTGAACCCGCGCACGCGGCTCTCCTCCTCAATGATTGTTAAGGGGAAACGTGTATTAGTTGGTCTGTACAGAGATGATGGTCTAGACTCGGGCTTGACACGGCAGATTTTACGGCAATCAACAATCCCAATGTAATAATTACTGTAGCGGAAACCCTTATGTacaaaacgaaagaaaaacatgatgaaCTGAAAACACTATACAACAGCAGTTACAGATGACCATGAGGAGAAccaggaacagagagagagcgatagagagacatagagagatagagagagagagagagagagagagagatagatagagagcgatagagagacatagagagatagagagagagagagagagatagagagcgatagagagacatagagagatagagagagagagatagatagagagagagagatagagagagacggGCCGGGGGTCGCTAGAGTCGTCTGATTCAGATGTGTCCTCCTGTCTGTTGCTGGAAAACGTCGATTGTGTCTTCATCCTCCATTTCCAA

Function

GO:

id name namespace
GO:0061919 process utilizing autophagic mechanism biological_process
GO:0006914 autophagy biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24529 False 794 lncRNA 0.48 2 2645891 2646750
TU24530 True 810 lncRNA 0.54 2 2645891 2646750

Neighbor

gene id symbol gene type direction distance location
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding downstream 40480 2596687 ~ 2605411 (-)
LOC122341565 fbf1,LOC107751622 coding downstream 67552 2565436 ~ 2578339 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding downstream 83741 2542845 ~ 2562150 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding downstream 132589 2509235 ~ 2513302 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding downstream 210356 2427945 ~ 2435535 (-)
LOC122341599 LOC107751358 coding upstream 18602 2665352 ~ 2668367 (-)
LOC122341581 NA coding upstream 24907 2671657 ~ 2674787 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding upstream 31784 2678534 ~ 2687338 (-)
LOC122341577 LOC107696344 coding upstream 53616 2700366 ~ 2705732 (-)
LOC122341579 NA coding upstream 59007 2705757 ~ 2709504 (-)
G16467 NA non-coding downstream 39597 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 55829 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 58031 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 130230 2514767 ~ 2515661 (-)
G16413 LOC107393734 non-coding downstream 262813 2382153 ~ 2383078 (-)
G16753 NA non-coding upstream 623326 3270076 ~ 3271309 (-)
G16780 NA non-coding upstream 828575 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 856258 3503008 ~ 3526848 (-)
G16781 NA non-coding upstream 871063 3517813 ~ 3523248 (-)
G16815 NA non-coding upstream 974739 3621489 ~ 3621869 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 5800 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 161661 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 195688 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 222345 2333556 ~ 2423546 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other downstream 271804 2314559 ~ 2374087 (-)
G16478 NA other upstream 3092 2649842 ~ 2654030 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 668002 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 826694 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1201230 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 1337906 3984656 ~ 3987431 (-)

Expression


Co-expression Network