LOC122341581


Basic Information

Item Value
gene id LOC122341581
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2671657 ~ 2674787 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235041.1
ACTTGTTATATCTCCTGTCATACTGACTCCATTTTCAATTTATTGGCAAGATGAAAAACGAATCAGCAatcagtttgaaataaaaaaacactttctggTTGGATTTTGAAAGTTTGACTTTAAAAAGACTGCAGATCTTTCTGATTCTTgtggttattattttttttaaaccatcaaTCAGAAAGTGAAACTACCCTTTAGATTCTTGGAGCTCAAAGAGAGAAAATGGATTTACTATCTGTGGAAGAATTTTCTTGTGCCGTGTGTCATGACATCTTTAAGGATCCTGTTCTTTTAACATGTTGTCACAGTTTCTGTAAAGAGTGTCTTCAACAGTTTTGGACAGCCACAAAAACTCAGGAGTGTCCCGTCTGCAGGAGAAGATCTTCAAGAGATGATCCCCCATGTAATCTAGTACTAAAAAACCTGTGTGAGTCTTTGAAGAAGAGAAGGGAGAGGCATTCGTCGGGATCTGAGGAGATCTGTGGTGTACACCGAGAGAAACTCAAGCTCTTCTGTCTGGAGGACGAACAGCCGGTGTGTTTAGTGTGTAGAGATTCACAGAAACACGTCAGTCACACATTCAGACCCATCGGGGAAATAATTTCATCATATAAGGAGAATCTCAAAACAGCACTGAAATCCTTGCAAGACAAAGTTAAAGaccaaaaaaatgttgcaaGAGAGTTTGAGAAAACAGTTCAATACATTAAGTCTCAAGCTGATCACACAGAGCATCAGATCAAACAGCAGTTTGAGAAGCTTCATCGGTTTCTCAGAGATGAAGAAGAAGCTACAATTAGTGCActgagggaggaagaggagcagaagaagaagatgatgaaggaGAAGCTGGAGGAGATCAACAGACACATCTCAGCTCTTTCAGACACAATCAAAGACACGGAGGAGATGATGAAAGACAACGATGTCTGCTTTCTGAAGaagTTTCCGGTCTCAATGGAAAGAGTCCAGATCTCCTCACAGCTGGATCCACAGACACCTTCTGGAGCTTTGATTCATGTGCCACGATACTTGGGCAACCTGTCCTTCAGAGTCTGGAAGAAGATGCAGGACATCGTCCAGAACACTCCTGTAATTCTGGACCCAAGCACGGCTCATCCCGATCTCATCTTGTCTGATGATCTGAGCTGTCTGAGATGGAGTGAGTACAGTCAACCGCTTCCTGATAATCCGGAGAGATTTGACATCTATCGCTGTGTGCTGGGTTCAGAGGGTTTTAACTCAGGGACACACAGCTGGGACGTGGAGGTTAAAGAAAGTTTATCTTGGGGTCTTGGAATAACTACAGCATCGAACCAGAGAAAGGGGCGTGATTTCTTTAACTCTGATTTCTGGAGTGTGGAGTATAGACTGTATAAATGGGCTGGCTTTAATGTTAAACAGGATCTTGatcgtgtgagagtgtgtctggaCTATGACGGAGGAACAGTGTCTTTCTCTGATCCTGTAACtaacacacatctacacacaatCACAACCACCTTCACAGACACCGTCTTACCATTCTTTCATAGTTATTCTCATATGAGGATCTTACCATTCAGTGACTGATATCCAGCACCACAGACATATTGCTTTTATGCAACAGTTCAGATGTTAAAAATCAAGTAAATGAAACACCTAtgccaaaatattttatttttgttgcaaacTGAGGCAAAGTACGATTTAGTGAAATTagtaaaaacaaattacaaaaaaaaaaagactgaatatgaatattattcATTGTGgtgaaaaacagttttgaaGCATATTTTATGCTTTAGAAGTCAGTTGTTCTGTGAATCTTCAAACACACATCaaatataacacaataaataaacatggaaataaa

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235041.1 True 1861 mRNA 0.40 6 2671657 2674787

Neighbor

gene id symbol gene type direction distance location
LOC122341599 LOC107751358 coding downstream 3290 2665352 ~ 2668367 (-)
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding downstream 66246 2596687 ~ 2605411 (-)
LOC122341565 fbf1,LOC107751622 coding downstream 93318 2565436 ~ 2578339 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding downstream 109507 2542845 ~ 2562150 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding downstream 158355 2509235 ~ 2513302 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding upstream 3747 2678534 ~ 2687338 (-)
LOC122341577 LOC107696344 coding upstream 25579 2700366 ~ 2705732 (-)
LOC122341579 NA coding upstream 30970 2705757 ~ 2709504 (-)
rbfox3b LOC107719784,LOC107695689,LOC107751640,LOC107696360,LOC107601602 coding upstream 38171 2712958 ~ 3378014 (-)
nog1 nog1,LOC107710974,LOC107695666,LOC107718944,LOC107567560,LOC107601571,LOC107696324 coding upstream 761899 3436686 ~ 3451093 (-)
G16475 NA non-coding downstream 24907 2645891 ~ 2646750 (-)
G16467 NA non-coding downstream 65363 2606060 ~ 2606294 (-)
G16464 NA non-coding downstream 81595 2589789 ~ 2590062 (-)
G16453 NA non-coding downstream 83797 2584894 ~ 2587860 (-)
G16440 NA non-coding downstream 155996 2514767 ~ 2515661 (-)
G16753 NA non-coding upstream 595289 3270076 ~ 3271309 (-)
G16780 NA non-coding upstream 800538 3475325 ~ 3525238 (-)
G16779 NA non-coding upstream 828221 3503008 ~ 3526848 (-)
G16781 NA non-coding upstream 843026 3517813 ~ 3523248 (-)
G16815 NA non-coding upstream 946702 3621489 ~ 3621869 (-)
G16478 NA other downstream 17627 2649842 ~ 2654030 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other downstream 31566 2631782 ~ 2640091 (-)
LOC122341591 NA other downstream 187427 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 221454 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 248111 2333556 ~ 2423546 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 639965 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 798657 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1173193 3847980 ~ 3863851 (-)
LOC122340684 cyp2k6,LOC107678271,LOC107553656,LOC107678272 other upstream 1309869 3984656 ~ 3987431 (-)
G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 other upstream 1728310 4403097 ~ 4407697 (-)

Expression


Co-expression Network