LOC122341565 (fbf1,LOC107751622)


Basic Information

Item Value
gene id LOC122341565
gene name fbf1,LOC107751622
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2565436 ~ 2578339 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235019.1
CAATGCCTTATTGTAAACAGGAAGTGCGTCACGGAATTTCAAACCCGTAGAGTCCCGTACAGCTCGTACCAAATCACCTCAGCGTTTGGGAATTACGcgaataaatattattttacttattactATTTCTCTTGATCTAGAAGGCGACTTCGCGCGTGGGCCCCGCTCGCAGAGACGCGCGATCTTTGACTGTGAGGAACTTGATTCATTCACGCTAACGCTCTTCCAGATCCGAGGCATCTGAGGATTGAGAAGCGATATCAAATTCTGTCCGTGTCCACATCACCCAGACAGAACCGGAACCGGATCCAGCAGCAGAAGTGCGTCTCAAACGGGTCCAGAGCGGGACTTCAGTGATAGTCAGCTGATCTTTTGAAGACGCCGCACTGGTTTCCATTGGCAACGGGCACGCGCACGGATTTCATCGTAAACACTCGGTTTCTTCTGGGGATCagacatgACTTCGAAACAGAAGAAGGGGCTTCGAAGCTCTATAGATGACGTGTTGGGAGATCTGCTGGGCGATGGCGAGGATGAAGGTCCGGTGAAGCCGCGCTCACCTGCAGCTCTGTCCAGCAGACCCACGGCCGTCCTCGCGTCCCGCGGCGGGAAGAGGTCGCTTCTGGACGACGATTTCTTCAGTAAACTGGCCGAAGAGGCCGAGAAAGACGACGAGGGCTCTGACGTGTCTGAGGCCGATCCCGCCGCTCTGCTGGACAGCATGAAGGACATGGATGACATGGACGCGGATCTCTTCAGCTCCAAGAAGAAGCCGAGCTCAGCTCCTGCTCAGAAGAACGAGCCCAAAAGAGCAGAAACCGCTAAAGCGGACGCCGCTCCCGAGGAGAAGAAGCCCAGTTCGGCTCCGGCCGCCGCAGCGAGAACGTACAAGAAGTTCAGCTTTCTGGACGACGAAGGTGGAGGTCTCGGTCCTCCTCTTGCTGGCGAAGataaAGGGGACGAACCGTTGGATGATTTACTGGATGACCTGGAACCCAAGCAGAAGACGGCTAAGAAAACCGAGCCGCCGTCCTCTTCCTCGCCGGCCTCTCCTCAGAAAACTGcTGCCGTGAAGAAGAGGGACGACCTGACGTTCGACGACGACGAAGACGACCTGATGGACGCTCTGGGCTTCGGAGAAACGCGCAAAACGCAAGAAAGCGGAAAGGCGCCGAAGAAAGACGGCGATCCTCCTCAGAGAGCCCGTACGCGACTGGATGAGATCCTGGGCCGAGGGACGTCCCCCCGTCTGCTGGAGAGACCCGTCACGGGAGAGAAGAAGGACGCGCCGCAGCCCGAGAAACAGACGGAGAAGAGCGCAGCGGGGAAAGCCTCTCTGGTGGACGACGAGGACTTCGCGTTCGGCTCCTATCAGCCCACCGTGGGCTCGACTCCAGAGGGCCGCCAGTCCCGCAGACAGTCTgtcagATTCTCGACTGAAGACGTGAGCGTTCACTCGCCCGAACACAAGCCCAAACCCTCGGCGCGCGCCGCCCGGCCCAGATCTGACTGGCTTGGCCTGAAGCAAGACGAAGAAGAGCTAAAGATGAAGGAGGAGCCCAGACAATCAGCATCAGAGACCCTGAAGCCCCCGGCGTCACCCTCCACAGCGGCCCGAAAAGAGACGCCCGCTTCTCCTAAAACCACCTCCAAACCAGTGAAGAGAGACGAGGACGAGGAAGACGACTGGCTCGCTGGAGCGCTGAGCCGCAAGAAAACACAGTCTGTGAGCCAATCAGAGGACAGGAAGCAGGAAGCGTCGTCAGGGCTGGGGGAGGAAGTGGACGCGTTTGTCAGCTCCAAATCAAATGTGCCTTCAGTCCCACGAAGACGACAGGAAGAGTCTCCCGTCCCAAACACAGAGCCCAGcaGAGAGTCCACTGGCGTCTACATCCAGAGCACCGCCAGCTCAGAAGCTCAACACAAACCTGGACTCAATCAGACCCTCTCGTCACAGTCCAGAGAGCCTAAGCCACGGCCCTTTAACTCATCCAGCAGCACACAACCCAAACCACACGCTCAGGACCCCAGAGCACCCTCAGGACGGGACGTCCAGACAGAGACGCTCCCCTCAAGCCCCTCCCAGGGGTGGCGTGTGCCTGCTCTAGCGCCCCCTGCGGTGTGGATGTTTCCACAGAAGTCTCCTGCAGAGGGCGCTGTACCTGtgacccaaacacacacacctctgtctGCAGACAGTCTACAGCAGCTTCTCATACAAcaacagctggcTCAGTCTCAGCTGTGGGGTCTGAGCGGCTCTCTGGACTCACAGAGACTCCGAGACACGGACCATCAGCACGACGTGACGTCACTGCAGAAGCGCATCATCCAGCTGGAGGGACAGGTGAGGAGCTTACAGCTGGAGAGAGACCAGAATCAGATGCTGTTAGAGAGCGTTCAGCAGAGACACAGACAAGACACTGAGCTCATGGAGAACAtgcacagAGCGCGTGTGAAGCTGCTGGAGGAATCGTCGGCTCAGCGGGAGCTGCGCTCGCGGCAGGAGAACGAGGACCTGGCGGAGAGACTGGCTGCGGTCGCGCGTCTGGCGGAGCAGGAGAGAGCAGAGATGCAGGCTCAGCAGCAGCGCAGACTCACGCAGTGTCAGcaggacagagacagagaggtgGAGAGACTCAGAGACCTGCAGAGGAAGTCCATCCTGGAGATGAAGAGAGATCATGAAGAGCAGATCCAGCGTCTGAAGAAACTGAAGGACGAGGAGATCGATGCAGTGACCAGCGCCACGTCTCAGACCAGGTCTCTGACGGTGGTCATCGAGCAGATGGAGCAGTTCTCCCGCAGGCTGGGCGATCTCTCGTCTCGGGTGGAGAGTTCACACGAAAACACGGCGCAGGGGCTGGAGGTCGGAGCCAGACAGAGAGACGAGCAGCTCCGAGGTACAGACACAAACACGGACACCTCCAGATCGGCGCAGAGCGGATCTGAACCTGTCCTACTCTCAGTCCTGCAGGAGCGCTTGAGTCAGCAGCAGCGCGAGATGGCCGAAGAGAGGTCACGGCTCAAAGAGGTCATCGCCAAGATGGACACGCAGCTGGCCGAGCAGCAGAGACAGCTGGAGAAGGAGCGCTGGAGGGTCACGTCAGAACAGGCCAAAGCCGAATCCTCCCTGCGAGGACTGGAGGAGGAGAGACGCACCATGATGCAGCAGTTCAGCATGGAGAGAGATGAGCTGGAGAGGGCAAAGagcgCTCTTCTGGAGGAGCAGCAGTCCGTCATGCAGCACTGTGCTGAAGAGCGCAGGAAGCTGGCGGCCGAGTGGAGCCGCTTTCACACGCAGGAGAAAGTGCGTCAGGAGCGCGTGGAGAGAGAGGCCAGCCGCGCCATGGAGAGAGACGCACACAGAGAGGGCTCCATCTTCAGCATGGCGCAGGAGCAGGCGGACCTGAAGCTGCGCGCCGGAGAGCTGAAACAGAAGGAGGAAGCgctgcagagagacagagacggtCTGGAGAAACTGAGACAGGAGCTGGACGCTGAGAAAGAGCGACTGAGCACCGCCGCGCTGAGGCTCAAGACACGAGCGCAGGAGGTGGAGGGGTTCAGTAAGCTTGCCTCCGAGCGCTtcgaggagggagagagagctcTCAGAGAGGCCAGACAGGTGGAGGCCGAACATCAGACGCGCCTGCGCAACATCCACACGCAGATGGAGAGACTGAGACAACAGGAGCACAACCTACAACagGAGCGTCTGAGGAGGACGGATCACCACAGAGACACGGAGCGACTGAGACACACTCCTCCCGTCCACCCGGCGCCTCTCATCACAGacttCTCTCCAGCGTTAGCCAGCACACACCTGACGGCCGCAGTGACCCCGCTGCCCCCTGAGCTCCACGCCCGCCTCGCCCTCATCAAACACACGGCCGagaagGACAGAGACTTCCTGCAGGAGGAGCAGTACTTCCTGGACACTCTGAAGAAAACCTCGTACAACTCCGCCGTGAACACATGACCACGAGAGACGGGGGTGGTTTTGATacgctttatttaataaacacgtAAAACAAAGCCGTTCTGTGTCCTGGCCTCAATCTCCAGCATTCAGAGCCACGATGGAGCGCAT

Function

symbol description
fbf1 Involved in apical junction assembly and establishment of epithelial cell polarity. Acts upstream of or within cilium assembly. Located in centriole; centrosome; and spindle pole. Part of ciliary transition fiber. Colocalizes with apical junction complex and keratin filament.

NR:

description
PREDICTED: fas-binding factor 1 isoform X4

GO: NA

KEGG:

id description
K16471 FBF1, ALB; Fas-binding factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235019.1 True 4093 mRNA 0.59 31 2565436 2578339

Neighbor

gene id symbol gene type direction distance location
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding downstream 3286 2542845 ~ 2562150 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding downstream 52134 2509235 ~ 2513302 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding downstream 129901 2427945 ~ 2435535 (-)
hook2 hook2,LOC107677331,LOC107696339 coding downstream 174325 2374613 ~ 2391111 (-)
LOC122341596 slc25a38a,LOC107572806,LOC107745513,LOC107672904,LOC107751976 coding downstream 247389 2316014 ~ 2318047 (-)
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding upstream 18348 2596687 ~ 2605411 (-)
LOC122341599 LOC107751358 coding upstream 87013 2665352 ~ 2668367 (-)
LOC122341581 NA coding upstream 93318 2671657 ~ 2674787 (-)
LOC122341582 LOC107696344,LOC107565151,LOC107672900 coding upstream 100195 2678534 ~ 2687338 (-)
LOC122341577 LOC107696344 coding upstream 122027 2700366 ~ 2705732 (-)
G16440 NA non-coding downstream 49775 2514767 ~ 2515661 (-)
G16413 LOC107393734 non-coding downstream 182358 2382153 ~ 2383078 (-)
G16403 LOC107678214,LOC107706618,LOC107581313 non-coding downstream 200867 2305249 ~ 2364569 (-)
G16401 LOC107696333,LOC107741349,LOC107749601,LOC107575050,LOC107575170 non-coding downstream 207271 2299037 ~ 2358165 (-)
G16453 NA non-coding upstream 6555 2584894 ~ 2587860 (-)
G16464 NA non-coding upstream 11450 2589789 ~ 2590062 (-)
G16467 NA non-coding upstream 27721 2606060 ~ 2606294 (-)
G16475 NA non-coding upstream 67552 2645891 ~ 2646750 (-)
G16753 NA non-coding upstream 691737 3270076 ~ 3271309 (-)
LOC122341591 NA other downstream 81206 2479128 ~ 2484230 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other downstream 115233 2444068 ~ 2450203 (-)
LOC122341602 junbb,LOC107741351,LOC107567221,LOC107568144,LOC107696348,LOC107726104 other downstream 141890 2333556 ~ 2423546 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other downstream 191349 2314559 ~ 2374087 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other downstream 203037 2303327 ~ 2362399 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other upstream 53443 2631782 ~ 2640091 (-)
G16478 NA other upstream 71503 2649842 ~ 2654030 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 736413 3314752 ~ 3319186 (-)
LOC122341810 pctp,LOC107710979,LOC107695691,LOC107718942,LOC107567557,LOC107579518 other upstream 895105 3473444 ~ 3483449 (-)
LOC122341931 LOC107673185,LOC107720837,LOC107573119 other upstream 1269641 3847980 ~ 3863851 (-)

Expression


Co-expression Network