hook2 (hook2,LOC107677331,LOC107696339)


Basic Information

Item Value
gene id hook2
gene name hook2,LOC107677331,LOC107696339
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2374613 ~ 2391111 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043235023.1
CGTCGCTATGTTGCTATGGCGACCTGCGTTCTCGCGGCGCGTCGGTGACGCGTCAGTCCGCTCGAGCGCATTTAGCGGCGCTGCTAGCGAGGAGCGGCGCAAACCGGCACCATGAGCCTCAATAAACACCAACTGAGCGACTCTTTATTCATCTGGCTGCAGACGTTCCAGGTGCCGTCGTCCTCCAGCAAACACGAGCTGACCAGCGGCGTGGCCATCGCTCATGTGCTCAACAAAATAGACTCGTCCTGGTTTAATGAGACGTGGCTCAGCAGGATAAAAGAGGATGGCAGCACAAACTGGAGGCTgaagGTCAGCAACCTCAAGAAGATCCTGCAGAGCATGATGGAGTATTATCATGATgtgctGGGTCAGCAGGTGTCCGACCAGCACGTTCCTGACGTGTGTCTGATCGGGGAGATGGGGGACGTGACTGAACTGGGTCGTCTGCTTCAGCTGGTTCTGGGCTGCGCCGTCAGCTGCGATCAGAAACAAGaGCACATCCAGCAGATCATGACTCTGGAGGAATCAGTGCAGCACGTCGTGATGACGGCCATACAGGAGcTGCTGGCCAAAGAGCCCGCGGAGGCCGGAGCTCCAGAGACGTACGGGGACTTCGACAGTCAGTCCAGGAAGTACTATTTTCTGAGTGAAGAGACGGACGACAGGGACTCGACGAGCCAGCGCTGCCGGGAGCTCCAGCGGCAGgtgtctGTCCTGATGGAGGAGAGGTCCTCGCTGCAGGCGGAGCTCCAGTCTCTGCGCGAGCGGCTCAGTCACAGCGAGACGCCCGACGTCTCCTCCACCATCACCAACAagaagctgctgctgctgcagagtCAGATGGAGCAGCTGCAGGAGGAGAACTACAGgctgGAGAGCAGTCGGGACGACCTGCGAGTGCGAGCTGATGTTCTGGAGCGAGAGCTGACGGATCTGCAGCTGAGGAACGAGGATCTCACCAGCCTCGCTCAGGAGGCCCAGTCCCTCAAAGACGAGATGGACATCCTCAGGCACTCGTCTGACCGCGTCAGTCGCCTGGAGGCTCTGGTGGAGACCTACAAGCGCAAGCTGGAGGACCTGGGCGACCTGCGCAGACAGGTGCGTCTGCTGGAGGAGAGGAACCACGTCTACATGCAGCGCACCTGTgagctggaggaggagcagcGGCGGGCCAACGCCATCCGCTCGCAGCTCGACACCTACAAGAGACAGGCTCACGAGATGAGCGCCAAACACTCGGCCGAGGCCATGAAAGCTGAGAAATGGCAGTTTGAGTACAAGAACCTCAGCGACAAATACGAGACGCTTCTGAAGGAGAGAGAGAAGCTGATATGCGAGCGAGACTCATTCAGAGAGACGACCGAAGAGCTGAGGTGTGCTCAGGTCCAGCAGCAGTGTTTAACAGATTCTCTGAGCGCTGATTCAGGAGCCGTGGGCAGCCTGGCGGCAGAGATCATGCCCACAGAGCTCAGggacACAGTTGTGCGTCTGCAGCAGGAGAATAAGACGCTGTGTGTTCAGGAGGAGTCGTACAGACACAGACTGGAGGAGCTTCAGACGCAGCTGGAGGATTCACAGCGCAGCCAGAACACACTCGAGACGCAGAAccggcTGAGTCAGCAGCAGATCTCAGAGCTGAGTGCTCAGGtggaggagctgcagagagCTTTACAGGACCAGGATAGCAAGACCGAGGATGTCATTTCGTCTCTGTTGAAGAAGAAGCTGGAGGAGCATCTagAGAAGCTCCACGAGGCTCATTCTGACCTGCAGAGGAAACGAGAGGTGATTGATGATCTGGAGCCCCATGTGGACAGCAACATGGCGAAGAAGGTCGACGAGCTGCAGGAGATCCTGAAGAAGAAGGATGAAGACATGAGGAGGATGGAGGAGAGATACAAGAGATATGTGGAGAAAGCTCGCACCgtcatAAAGACTCTAGACCCCAAGCAGAAGTCCAGCCCGGTTCCTGCTGAAGTTCAGGCGCTGAAGAACCAGCTGACAGAGAAGGACCGGAAGATCCAGCACCTGGAGcatGATTTCGAGAAGACGCGCTCCAGACATGATCAGGAGGAGAAGCTCATCATCTCAGCCTGGTACAACATGggcATGGCTCTTCATCAGAAGGTGGCTGGAGAGCGCTCCGGCTCCGCTCCGGCTCAGTCCTTCCTCTCCCAGCAGAGACAGTGGACTCAAGCCCGGCGAGGCCTGTCCCGTCCGCAGCCCAGATAAACCCCTGTCCTTTTATCAGTGTGTTTTAGACCAGGTTTAGTCGTTTTTAGTTGTAGCCGGAAAGCCTTGCGCTCCGTGAAGCAGATCAACCTTCGTttcttttaaagctttaaagtgtttttactgtagttGGGTGTCGATCGGGGTTACGGTGCACTTTACACACTCGGTGCCTTCAGCCATCCAGAAACCAGACGCTCTGCGCTGGAGCCTTGAACGCCACGAACAAATCCAGAGCTTTCGTCAGGATCTTTCCAGAGAGCCGCTGTGGTTTAGTGAACGCTCATCACGGATGGACCGCTGGAGGAGCGCGAGTTCCCACCAGTTGCTGCTCGATTTCGTTTTTATCTCGTCGTTGTTTCGTTTTGGCAGAAATACACTACCGACTGAACACTGTGTTCTGGCCCCCGTCGGTCCGGGCCGAGCTTCGTTCGTTTgctttttgttcgttttttggGTCACGGTGCTGATGTTCACGAGTTGTTTGCGTGTTTCTCACGGCGTTTTCCTCGTTCGCTCGGGACCGATGGGGGCGCTACGGAAATGATCACTTTAGTCTCACCCTTCTTCTCTTTGCACTACAATAAAAGAGGTTATCGGTACGAAATGCTGTGACATCTGTGTGTTGAAGTGAGTGGATAATGAACCGTTTTATCAAATGAAATGCTGAACGAAATGCTGAAGTCGGACGAATAAGTCGATTTATCGTTGGTCCGTGACTCCTGTTTGCATTAAAGATACTGACATCGAAGAATTAACAGAACACTTCTGAAATAAGATGAACGTTTTGTAATATTAGCTTATTAGTAGCATACCTTttcatatttatgatttatggtTTTAATATGTCTGCTTCCGAATATAATCATGATCATTCAACTAATGCATAAAAGACTGCATTGCTGTAAACATCACATTAAATGTGTAAACTGTTTCCAGGTATTACTCTATACTGTGGTACTGTACTGTCAGGTGTGTTATTTAAATCAACTTAATTCTAACTTtaagtgcattcattttaatcaaattgtattatttttttaaatcaggtttAGCTAGATGACGATCTTATTTTATCACTCACGGTATACCGAACTGTTCTGTGtattaaagcatttcatttaa
>XM_043235024.1
CGTCGCTATGTTGCTATGGCGACCTGCGTTCTCGCGGCGCGTCGGTGACGCGTCAGTCCGCTCGAGCGCATTTAGCGGCGCTGCTAGCGAGGAGCGGCGCAAACCGGCACCATGAGCCTCAATAAACACCAACTGAGCGACTCTTTATTCATCTGGCTGCAGACGTTCCAGGTGCCGTCGTCCTCCAGCAAACACGAGCTGACCAGCGGCGTGGCCATCGCTCATGTGCTCAACAAAATAGACTCGTCCTGGTTTAATGAGACGTGGCTCAGCAGGATAAAAGAGGATGGCAGCACAAACTGGAGGCTgaagGTCAGCAACCTCAAGAAGATCCTGCAGAGCATGATGGAGTATTATCATGATgtgctGGGTCAGCAGGTGTCCGACCAGCACGTTCCTGACGTGTGTCTGATCGGGGAGATGGGGGACGTGACTGAACTGGGTCGTCTGCTTCAGCTGGTTCTGGGCTGCGCCGTCAGCTGCGATCAGAAACAAGaGCACATCCAGCAGATCATGACTCTGGAGGAATCAGTGCAGCACGTCGTGATGACGGCCATACAGGAGcTGCTGGCCAAAGAGCCCGCGGAGGCCGGAGCTCCAGAGACGTACGGGGACTTCGACAGTCAGTCCAGGAAGTACTATTTTCTGAGTGAAGAGACGGACGACAGGGACTCGACGAGCCAGCGCTGCCGGGAGCTCCAGCGGCAGgtgtctGTCCTGATGGAGGAGAGGTCCTCGCTGCAGGCGGAGCTCCAGTCTCTGCGCGAGCGGCTCAGTCACAGCGAGACGCCCGACGTCTCCTCCACCATCACCAACAagaagctgctgctgctgcagagtCAGATGGAGCAGCTGCAGGAGGAGAACTACAGgctgGAGAGCAGTCGGGACGACCTGCGAGTGCGAGCTGATGTTCTGGAGCGAGAGCTGACGGATCTGCAGCTGAGGAACGAGGATCTCACCAGCCTCGCTCAGGAGGCCCAGTCCCTCAAAGACGAGATGGACATCCTCAGGCACTCGTCTGACCGCGTCAGTCGCCTGGAGGCTCTGGTGGAGACCTACAAGCGCAAGCTGGAGGACCTGGGCGACCTGCGCAGACAGGTGCGTCTGCTGGAGGAGAGGAACCACGTCTACATGCAGCGCACCTGTgagctggaggaggagcagcGGCGGGCCAACGCCATCCGCTCGCAGCTCGACACCTACAAGAGACAGGCTCACGAGATGAGCGCCAAACACTCGGCCGAGGCCATGAAAGCTGAGAAATGGCAGTTTGAGTACAAGAACCTCAGCGACAAATACGAGACGCTTCTGAAGGAGAGAGAGAAGCTGATATGCGAGCGAGACTCATTCAGAGAGACGACCGAAGAGCTGAGGTGTGCTCAGGTCCAGCAGCAGTGTTTAACAGATTCTCTGAGCGCTGATTCAGGAGCCGTGGGCAGCCTGGCGGCAGAGATCATGCCCACAGAGCTCAGggacACAGTTGTGCGTCTGCAGCAGGAGAATAAGACGCTGTGTGTTCAGGAGGAGTCGTACAGACACAGACTGGAGGAGCTTCAGACGCAGCTGGAGGATTCACAGCGCAGCCAGAACACACTCGAGACGCAGAAccggcTGAGTCAGCAGCAGATCTCAGAGCTGAGTGCTCAGGtggaggagctgcagagagCTTTACAGGACCAGGATAGCAAGACCGAGGATTCGTCTCTGTTGAAGAAGAAGCTGGAGGAGCATCTagAGAAGCTCCACGAGGCTCATTCTGACCTGCAGAGGAAACGAGAGGTGATTGATGATCTGGAGCCCCATGTGGACAGCAACATGGCGAAGAAGGTCGACGAGCTGCAGGAGATCCTGAAGAAGAAGGATGAAGACATGAGGAGGATGGAGGAGAGATACAAGAGATATGTGGAGAAAGCTCGCACCgtcatAAAGACTCTAGACCCCAAGCAGAAGTCCAGCCCGGTTCCTGCTGAAGTTCAGGCGCTGAAGAACCAGCTGACAGAGAAGGACCGGAAGATCCAGCACCTGGAGcatGATTTCGAGAAGACGCGCTCCAGACATGATCAGGAGGAGAAGCTCATCATCTCAGCCTGGTACAACATGggcATGGCTCTTCATCAGAAGGTGGCTGGAGAGCGCTCCGGCTCCGCTCCGGCTCAGTCCTTCCTCTCCCAGCAGAGACAGTGGACTCAAGCCCGGCGAGGCCTGTCCCGTCCGCAGCCCAGATAAACCCCTGTCCTTTTATCAGTGTGTTTTAGACCAGGTTTAGTCGTTTTTAGTTGTAGCCGGAAAGCCTTGCGCTCCGTGAAGCAGATCAACCTTCGTttcttttaaagctttaaagtgtttttactgtagttGGGTGTCGATCGGGGTTACGGTGCACTTTACACACTCGGTGCCTTCAGCCATCCAGAAACCAGACGCTCTGCGCTGGAGCCTTGAACGCCACGAACAAATCCAGAGCTTTCGTCAGGATCTTTCCAGAGAGCCGCTGTGGTTTAGTGAACGCTCATCACGGATGGACCGCTGGAGGAGCGCGAGTTCCCACCAGTTGCTGCTCGATTTCGTTTTTATCTCGTCGTTGTTTCGTTTTGGCAGAAATACACTACCGACTGAACACTGTGTTCTGGCCCCCGTCGGTCCGGGCCGAGCTTCGTTCGTTTgctttttgttcgttttttggGTCACGGTGCTGATGTTCACGAGTTGTTTGCGTGTTTCTCACGGCGTTTTCCTCGTTCGCTCGGGACCGATGGGGGCGCTACGGAAATGATCACTTTAGTCTCACCCTTCTTCTCTTTGCACTACAATAAAAGAGGTTATCGGTACGAAATGCTGTGACATCTGTGTGTTGAAGTGAGTGGATAATGAACCGTTTTATCAAATGAAATGCTGAACGAAATGCTGAAGTCGGACGAATAAGTCGATTTATCGTTGGTCCGTGACTCCTGTTTGCATTAAAGATACTGACATCGAAGAATTAACAGAACACTTCTGAAATAAGATGAACGTTTTGTAATATTAGCTTATTAGTAGCATACCTTttcatatttatgatttatggtTTTAATATGTCTGCTTCCGAATATAATCATGATCATTCAACTAATGCATAAAAGACTGCATTGCTGTAAACATCACATTAAATGTGTAAACTGTTTCCAGGTATTACTCTATACTGTGGTACTGTACTGTCAGGTGTGTTATTTAAATCAACTTAATTCTAACTTtaagtgcattcattttaatcaaattgtattatttttttaaatcaggtttAGCTAGATGACGATCTTATTTTATCACTCACGGTATACCGAACTGTTCTGTGtattaaagcatttcatttaa

Function

symbol description
hook2 Predicted to enable dynein light intermediate chain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization and cytoskeleton-dependent intracellular transport. Predicted to be active in centrosome and cytoplasm. Is expressed in blastomere. Orthologous to human HOOK2 (hook microtubule tethering protein 2).

NR:

description
protein Hook homolog 2-like isoform X2

GO: NA

KEGG:

id description
K16611 HOOK2; protein HOOK2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043235023.1 True 3360 mRNA 0.52 23 2374613 2391111
XM_043235024.1 False 3354 mRNA 0.52 22 2374613 2391111

Neighbor

gene id symbol gene type direction distance location
LOC122341596 slc25a38a,LOC107572806,LOC107745513,LOC107672904,LOC107751976 coding downstream 56566 2316014 ~ 2318047 (-)
LOC122341666 NA coding downstream 84251 2270598 ~ 2290362 (-)
mcoln1b mcoln1b,LOC107672921,LOC107755617 coding downstream 121165 2243891 ~ 2253448 (-)
wu:fb95e10 LOC107672920,LOC107563751,LOC107755615,LOC107696329 coding downstream 136367 2212166 ~ 2238246 (-)
engl LOC107755613,LOC107563770,LOC107575003 coding downstream 197660 2165727 ~ 2176953 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding upstream 36834 2427945 ~ 2435535 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding upstream 118124 2509235 ~ 2513302 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding upstream 151734 2542845 ~ 2562150 (-)
LOC122341565 fbf1,LOC107751622 coding upstream 174325 2565436 ~ 2578339 (-)
cygb1 cygb1,LOC107569691,LOC107741345,LOC107751633,LOC107696353,LOC107677343,LOC107573176 coding upstream 205576 2596687 ~ 2605411 (-)
G16403 LOC107678214,LOC107706618,LOC107581313 non-coding downstream 10044 2305249 ~ 2364569 (-)
G16401 LOC107696333,LOC107741349,LOC107749601,LOC107575050,LOC107575170 non-coding downstream 16448 2299037 ~ 2358165 (-)
G16400 NA non-coding downstream 19146 2296107 ~ 2355467 (-)
LOC122341603 NA non-coding downstream 54291 2302189 ~ 2320322 (-)
LOC122341671 NA non-coding downstream 108982 2262671 ~ 2265631 (-)
G16440 NA non-coding upstream 123656 2514767 ~ 2515661 (-)
G16453 NA non-coding upstream 193783 2584894 ~ 2587860 (-)
G16464 NA non-coding upstream 198678 2589789 ~ 2590062 (-)
G16467 NA non-coding upstream 214949 2606060 ~ 2606294 (-)
G16475 NA non-coding upstream 254780 2645891 ~ 2646750 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other downstream 526 2314559 ~ 2374087 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other downstream 12214 2303327 ~ 2362399 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other downstream 164380 2182526 ~ 2210233 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other downstream 374139 1788245 ~ 2000474 (-)
LOC122333107 NA other downstream 524333 1846692 ~ 1850280 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 52957 2444068 ~ 2450203 (-)
LOC122341591 NA other upstream 88017 2479128 ~ 2484230 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other upstream 240671 2631782 ~ 2640091 (-)
G16478 NA other upstream 258731 2649842 ~ 2654030 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 923641 3314752 ~ 3319186 (-)

Expression


Co-expression Network