G16400


Basic Information

Item Value
gene id G16400
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2296107 ~ 2355467 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24405
gaccttttgttcctttggatatcagAATGTTTCTATgaatagtcttattgcatttacaggttttgattcagctcTTTACACTCGAATGAGAACGGCTGCGTGGACTTTGTCGCTAAAAGTTATTCTTCATTGGGATTCTTCATTATTCTTCATTATTCTTCAAGGCCTCGCTTATCGTGACGTTCATCGTGTTGCTTGTTCCCTTGTCGTTTCCCGTCCATGTCCACGTCAGTGTAGACCTTTCCAGCGCTAATCTGGGTCTGTAATCTATAAATTTCAGTCCAGATAATTCCTGAATTTTT
>TU24406
CGCTCGTgaaagggtcccccttttcctgcaggccctggtcgaagGTCAATGCGTGtccggtcttttctttgcgtctcgttaaaaatcactaatatttatcaATCTTTTGggtttacaattacaattacaatctgcggaaaacctcagaagtcactaacctcaCTCCTCGCccaaaaagagtcatttttaatGCGTTCCTAAAAGTTATCGTAAGCTAACCaagattaacgtttattttgccaggcgaGAATATGGTTTCATTCATAAACTTTTGcgcaactgatcagcagtacggaaacaaaacaaaaaataaaacaaacacaaaaggtcagtatacctggtctttaggACACGCCCCCTTTcccacagaacacagttctaccaagttcttgaTCTTCTCcgtaatataagtgattactgtgaaattgagaccagtTTACCagtcgcactgagacctttcaaatgagaccaaacatgagagtgaagaacaataggttcataagacacatgacatataatgccttattcctaatgaactttaaaccaagtccttTAGTCCTTTTTGAAgaccttttgttcctttggatatcgaATGTTCCTATgaatagtcttattgcatttacaggttttgattcagctcTTTCACACTTCATTAATGAGAACGGCTTATCGTGGCATCGTGGACTTTGTCGCTAAAAGTTATTCTTCATTGGGATTCTTCATTATTCTTCATTATTCTTCAAGGCCTCGCTTATCGTGACGTTCATCGTGTTGCTTGTTCCCTTGTCGTTTCCCGTCCATGTCCACGTCAGTGTAGACCTTTCCAGCGCTAATCTGGGTCTGTAATCTATAAATTTCAGTCCAGATAATTCCTGAATTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24405 False 302 lncRNA 0.41 2 2296107 2354938
TU24406 True 882 lncRNA 0.39 2 2296107 2355467

Neighbor

gene id symbol gene type direction distance location
LOC122341666 NA coding downstream 5745 2270598 ~ 2290362 (-)
mcoln1b mcoln1b,LOC107672921,LOC107755617 coding downstream 42659 2243891 ~ 2253448 (-)
wu:fb95e10 LOC107672920,LOC107563751,LOC107755615,LOC107696329 coding downstream 57861 2212166 ~ 2238246 (-)
engl LOC107755613,LOC107563770,LOC107575003 coding downstream 119154 2165727 ~ 2176953 (-)
si:ch211-106h11.1 LOC107755611,LOC107672936,LOC107563749 coding downstream 141079 2148296 ~ 2155028 (-)
hook2 hook2,LOC107677331,LOC107696339 coding upstream 19146 2374613 ~ 2391111 (-)
rtbdn zgc:109949,LOC107741352,LOC107677336,LOC107567222,LOC107696350,LOC107568146 coding upstream 72478 2427945 ~ 2435535 (-)
LOC122341600 LOC107567216,LOC107677333,LOC107741355,LOC107696343,LOC107751630 coding upstream 153768 2509235 ~ 2513302 (-)
LOC122341573 sphk1,LOC107741344,LOC107677335,LOC107751628,LOC107696311 coding upstream 187378 2542845 ~ 2562150 (-)
LOC122341565 fbf1,LOC107751622 coding upstream 209969 2565436 ~ 2578339 (-)
LOC122341671 NA non-coding downstream 30476 2262671 ~ 2265631 (-)
G16393 NA non-coding downstream 55662 2239298 ~ 2240445 (-)
LOC122342126 NA non-coding downstream 155748 2136069 ~ 2140359 (-)
G16385 NA non-coding downstream 170389 2125316 ~ 2125718 (-)
G16217 NA non-coding downstream 294536 2001274 ~ 2001571 (-)
G16413 LOC107393734 non-coding upstream 26686 2382153 ~ 2383078 (-)
G16440 NA non-coding upstream 159300 2514767 ~ 2515661 (-)
G16453 NA non-coding upstream 229427 2584894 ~ 2587860 (-)
G16464 NA non-coding upstream 234322 2589789 ~ 2590062 (-)
G16467 NA non-coding upstream 250593 2606060 ~ 2606294 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other downstream 85874 2182526 ~ 2210233 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other downstream 295633 1788245 ~ 2000474 (-)
LOC122333107 NA other downstream 445827 1846692 ~ 1850280 (-)
G16172 NA other downstream 643741 1620964 ~ 1652366 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 1112519 1164316 ~ 1183588 (-)
G16421 LOC107572279,LOC107572278,LOC107668191,LOC107569684,LOC107574181,LOC107574114 other upstream 88601 2444068 ~ 2450203 (-)
LOC122341591 NA other upstream 123661 2479128 ~ 2484230 (-)
nup85 nup85,LOC107677339,LOC107569694,LOC107696313,LOC106601803 other upstream 276315 2631782 ~ 2640091 (-)
G16478 NA other upstream 294375 2649842 ~ 2654030 (-)
LOC122333478 LOC107695702,LOC107724673,LOC107601588,LOC107553654,LOC107716264,LOC107673211 other upstream 959285 3314752 ~ 3319186 (-)

Expression


Co-expression Network