G16172


Basic Information

Item Value
gene id G16172
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1620964 ~ 1652366 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU24042
TGTGTTTCACGGCGTCTGAATGAAGGTCGGCGGTCTGAGAAGATGAGGACGCTCACAAAGTTGCTGCATGATGTCTCCGTGTTCATCAAAAGGTACATTTGCTTTttgaaaaagttgtttttggACATTTCAGCCAAGGTGACATGAATGCCGAAACTTTTGTTATGAATCTACTCGTAAGTTTTCTAACAGAGAAGCCTGTTTCACAGTGTTTTATGAAGAACTGGAAAGCTATTGTTATACTATTCAAAGAAGCACTAATAGAAAGGTGATCAAAACTGTCCGCTGCGCTCGGAGTGATCCGAAGGCCTTGATTGCgtgtttaatttagatttttactcAATCCCTgttctttgtgttttgtattgtctattgtattattttaatttaaaaaatccaattaaaaaaaaaaaaagagaggatgaGGATGACTTCCGGAGACTCACGGCGCCGTCAGGAAACCCTCCAGATATCCGGCCAGGAACATGGTGACGTCATCGCGCTGCGCCGCGCGCCCGCGTCCCGCGCGGATCTCGAGCACGCCCCATCCCGTCGACCACAGCGTGTCGTTATAGAAACCCTCCAGATATCCGGCCAGGAACATGGTGACGTCATCGCGCTGCGCCGCGCGCCCGCGTCCCGCGCGGATCTCGAGCACGCCCCATCCCGTCGACCACAGCGTGTCGTTATAGTAACCGTACGCGTCGCCTCCCGCTGCCGCGACGAAGCACGCGACAATTAACGCGCAGACGCTGCTCTTCGGCATGTTTGTGTCGGCGACGTTCAGTCCCgcagaaactgaaaataaagtgGGAAGTCCGTCAGGGAAGAGCTTCCTCGTGACATAACAACATCGAAATAAATCCCCGCGGACGCACGCACGCGAGATAACGTTTATGTAACGCGACTGCCGCGCGCTGAATTACACAAtaaacacagaagaaagaaaagtaagcttcaccccagatgggactcgaacccacaatccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24042 True 990 TUCP 0.39 3 1620964 1652366

Neighbor

gene id symbol gene type direction distance location
LOC122330436 NA coding downstream 10114 1607064 ~ 1610850 (-)
LOC122332889 LOC107575231,LOC107572359,LOC107722878,LOC107709162 coding downstream 34453 1585711 ~ 1586511 (-)
LOC122329992 NA coding downstream 35257 1582088 ~ 1585707 (-)
zmp:0000000896 zmp:0000000896,LOC107745527,LOC107672931,LOC107563726,LOC107564880,LOC107711547,LOC107691081 coding downstream 70177 1538691 ~ 1550787 (-)
LOC122329710 LOC107564877 coding downstream 82656 1530412 ~ 1538308 (-)
gucy2ca gucy2c,LOC107672912,LOC107745524,LOC107563725 coding upstream 11299 1663665 ~ 1680199 (-)
csdc2b csdc2,LOC107672917,LOC107745522,LOC107691088,LOC108272855,LOC107734809 coding upstream 34801 1687167 ~ 1691179 (-)
polr3h polr3h,rpc8,LOC107672915,LOC107734710,LOC107691087,LOC107745521,LOC106601238 coding upstream 38953 1691319 ~ 1694052 (-)
tefb tef,LOC101073097 coding upstream 50201 1702567 ~ 1707644 (-)
LOC122330004 NA coding upstream 308363 1960729 ~ 1975195 (-)
LOC122330691 NA non-coding downstream 32535 1586841 ~ 1588429 (-)
G16161 NA non-coding downstream 42004 1565193 ~ 1578960 (-)
G16159 NA non-coding downstream 63123 1557402 ~ 1557841 (-)
G16124 NA non-coding downstream 140282 1417894 ~ 1480682 (-)
LOC122330746 NA non-coding downstream 165904 1453240 ~ 1455060 (-)
G16184 NA non-coding upstream 1948 1654314 ~ 1655048 (-)
G16189 NA non-coding upstream 69963 1722329 ~ 1929713 (-)
G16192 NA non-coding upstream 74967 1727333 ~ 1942095 (-)
LOC122330697 NA non-coding upstream 123948 1776314 ~ 1779027 (-)
LOC122330758 NA non-coding upstream 144346 1796712 ~ 1797755 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other downstream 437376 1164316 ~ 1183588 (-)
G16054 mei1,LOC107674470,LOC107731661 other downstream 468204 1147589 ~ 1152760 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other downstream 471071 1134810 ~ 1149893 (-)
G16048 NA other downstream 506262 1109491 ~ 1114702 (-)
LOC122332622 LOC107701866 other downstream 545637 1065482 ~ 1075327 (-)
zc3h7ba LOC107563727,LOC107672930,LOC107722838,LOC107572808 other upstream 135879 1788245 ~ 2000474 (-)
LOC122333107 NA other upstream 194326 1846692 ~ 1850280 (-)
pkn1b LOC107672927,LOC107755614,LOC107742419 other upstream 530160 2182526 ~ 2210233 (-)
G16402 ubn2b,LOC107567211,LOC107677340,LOC107741349,LOC107696333 other upstream 650961 2303327 ~ 2362399 (-)
trir c12h19orf43,LOC107677344,LOC107575051,LOC107567214 other upstream 662193 2314559 ~ 2374087 (-)

Expression


Co-expression Network