LOC122332622 (LOC107701866)


Basic Information

Item Value
gene id LOC122332622
gene name LOC107701866
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1065482 ~ 1075327 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU23578
TaagcacaaatatatttactttcaCTTAAATGAATTGAGTTCAGCCTTGTTTAATAAAAGGTATAAAGTTATAGAGGCTGTGTGTTAATCTTGCCTACGGAAATGTGAAGCAGCacaaaaaataatccaaaaaaataaattgtgagcAGCAAATCGGATtatgagaatgatttctgaaggaccagtAGAAGAGCAGCATAAAAGCAATCTGCTATCTGTACATGATACGGATCTACCCCACAAACCTAATCCTATAGCATTGTCAcgccaaagtccatttttgcatCCACTTTCATGAGATCAGgtagaaattattttttctatttgtcaAATACAGCTGGAAAGACAAATTCTAATGTAAAGTAGTATATTggtcatttattaatgttaaataaatacataatagatGGCATTTTTCTATCATTTTGATCGGGGTTAGTGGGCTGCTTTGTGCCAGAAAGTCCAGGGCCACTGCTTAGGCTCAGTCTGCTCCTATTGCTTCATCCTCACCAAATGAGGCACAATAATGCATCAAGCAATAAAATATCATCTGGACAAATCCTTCCTAGCCAGACGTTGCAAGTCACATGACAAAGAAACATTTGCTAAAGTTTAGAGTGAAGTAAGTTCATCAGATTCAACTGTGATTCAACTCGGAGATGGAGTTGCTCCCCAAAGAAAggttattattgtgttttcttatgagtttcatttcatgtttaGTTGCCTTATAACGCATATGAGTCAAAAGTAGAAGCTTTTACAAACTTGTTCAGGAAGTTGAAGGAGAAGCTGTGACCTCTCTCAAGGTCTGAGATTGAATGAGTTACTCTAAAAAAAGACGCATACTTTGTAATCGATCTTTCTGTGCTTCTCTTTTATGTAGGAATGAATACCTGAACCCCGTATTAAACGAGCCCCAGGGCTAAATTATGAAAGATCATAGTATTGATTGGCTCTAATGTTAACGGTGACTATTCAGCGGTTTTAAATCTGAAGTATTTCCGTACCTTCTTGATTTGCAAACGTGCCACACGTAAAAGGTTGCTCGTTCTTGTGAATATCCCTTGAAAAGATTGTTTAAGTGACAGTGCTAAACATCAGATGAATGCACTGAAAGACATCGATCTTAATTTCCAAGATGAAGCACGGTATAGTCGCacagaattgtaatatttactcTATATTTGAATCCATTTGTGGTACTAACCCCAGGACTGTTTTATTCGTGATTTCCGTTCCATCTCCTCGTGTGACTCAGTTTCATCATTGTCTAATTGTTTATGTTCAGGTGAGTCGTGCCAATTATCCTCATTCACCCTCCCTATATAGGCTGCGCTCTGTTTAGTGTTCACCGTCCGTTCTCGTCAATGTTAACTACATCTCTGTAAAGGTGTGTGCTCCACCCTGCTTGTTGGATTATCTTTACGTGGTTTATTAAAGACTGATAACTATTA
>XM_043229981.1
CATCAGACCTCAGAGGAAGACGTTTAGTTTCACCGCGCTGTTGTTTTGTCGAATCAGGCCAGTAAAAACCTGTAATATTCTCATTGTGATTAAGTTTTGAAGCAAGCAGGGATATATGGAGGTGCATCATCTGAACTGAGATCTTCTTCTGTGAAGATGATGTttgttaaagaggagagtgaggaGAACGCGAGAGAACCAGTaacatggagaataaaacacGAGGAATCGGATTCTTTGACAATAAAAGAAGAGGAACCAGGATCTTTGACGATAAAAGATGAGGAACCAGAATGTTTGATAATAAAAGGCGAGGAAACAGAATCTTTCAGAATTAAAGATGAGGAACCAGAACCCTGGAGAATAAAAGACGAGCAGCGAGGAGAGTTTATTGAAGAAAGTGAGGAGGTTGAAGAATTAAATGAAGTTGAGGAGAAAAAACATGATTCAGAGAAAAGAAGAGCCAAGAAGTCTTTCACCTGCTctctgtgtggaaagagtttGACATGCAAATATAATCTTGATGTTCACATGAGAGTCCACAGTGGAGAGAAACCGTTCACTTGTGGTCAATGTGGGAAGAGTTTTACACAGTTGTTAAGCCTTAGGGTGCACACCAACATCCACACAGGAGAGAAGAAGTTCAATtgttcacactgtgacaagagaTTCAGTCGGTCAGGAGACCTGAAGAAACACAAGTTagtccacactggagagaaaccgtactcgtgtgatcagtgcgggaagagtttcacaCAAAATGGCAGCCTTACGGCACATatgagagttcacaccggagagagactGTTTATATGTAATCAGTGTGGAACGAGTTTTACACACTTAGCCAACCTTAAGGTACACATGAacatccacactggagagaaaccttatAAGTGTTCACACTGCGACAAGAGGTTCACGCGCTCAGGAGGCCTGAAGAAACACAAGGTagtccacactggagagaaactcCACAcgtgtgatcagtgcgggaagagtttcacaCAAAAAGGAAATCTTATGACGCACATGCGAGTTCACACGGGAGAGAAACTGTTCATATGTAACGAAAGTGGGAAAAGTTTTGCACACCTAGGAAACCTTAAGGTGCACATGAACATCCACgctggagagaaaccttacaagtgttcacactgtgacaagagCTTCAGTCAGTCAGGATACCTGAAAACacacgagaggatccacaccggagagaaacggTACTcatgtgatcagtgcgggaagagcttcgtAATAAAAGGAAGCCTTATGGCACATATGAAAGTCCATACAGGCGAGAAACTGTACACCTGCAATCTATGTGGAAAGAGTTTGAAATGCAAATACAGTCTTGCTGGTCACATGAGactccacactggagagaaaccgtacacatgtgatcagtgcgggaagagtttcacaCAAGCAGCGCATGTTAAAGAACACATGAGtgtccacaccggagagaaaccttttAAGTGCTCATACTGTGACAAGAGTTTCTATAGGTTAGGAGACCTGAAAAAACACGAGGGGATCCACAGTGGAGAGAAACCTTACGAGTGTTCCCACTGTGACAAGAGATTCAATAAGTCATCGAATTTGAAAACGCACGAGAGGATCCACACGAAAGAGAAACCCtacaagtgttcacactgtgacaagagaTTCAACCAGTCGTCCGGTCTGAAAACGCACGAGAGGactcacactggagagaaaccgtaTCAGTGCGCTGAATGTGGGAAGCGCTTCAGTCATTCGTCTTGTCTACACAGTCATACAAAACACAATCACTGTAAAGCCCCACGCACACAGGAGGACGTTTCGCTGCATGCAAGCAGGAATATCTCTGTACTGAGATCTGCTGCTGTGAAAATGATGTTTGTTAAAGAGGAGAGCGAGGAGAACATCAGAGCGCCAGAAACATGCGAAATAAAACACGAAGAACAAGAAACATGGGAAATAAAGCACGAGGAACCAGAAACATGGGAAATAAAGCACGAGGAACCAGAAACATGGGAAATAAAACACGAGGAACCAGAAACATGGGAAATAAAACACGAGGAACCAGAaacatggagaataaaacaagaGGACCCAGAAACCTGGAGAATAAAATACGAGGAACCAGAAccctgcaaaataaaacaagaggaGACATGGAGAATGATCCAAGAGGAACAAGAagaatCGCTTACAGAAAACAAGGATATTGAAGAATCGAGTGAATCTGAGACAAATCAGATCAAACTTGCAACAAACCCGTTGAGAAAAACCAAGAAAGCTTTCATCTGcgctcagtgtggaaagagttttccGCGCAAATACGGCCTCGAAGCTCACACgagagttcacaccggagagagaccGTTCAcgtgtgatcagtgcgggaagagttttaCACAAGTAGCACACCTTAACGATCACATGAacatccacaccggagagaagctgTACACGTGTGAGCAGTgcggtaaaatgtttttatgggcTTCAGCTCTGAAGCAGCACCTGACGGTTCACACGAAGGAGAAGCCGCATTCGTgcaatttgtgtgaaaagactTTTTCGTGCATACAAAACCTGAGAGCGCACCAGAAAGTGCACGCCGATGTGAGAAAGTACACGTGCGGCGGgtgcggaaagagtttcatTTCGGCGAACTGTTTAAAACAGCATcagaggatccacaccggagagaaaccgtacaCGTGTTCACACTGCGACAAGAGATTCAATCATCCGACGCATCTGAAAACGcacgagaggatccacaccggcGAGAAACCCTATAAGTGCTCACGCTGCGACAAGAGATTCAACAACTCGTCAAATCTGAAGACacacgagaggatccacaccggagagaaaccgtacgCCTGTTCTCACTGCGACCGCAGTTTCGGTAACTCGGGAACCCTGAAAGCACACaagaggatccacaccggagagaaaccgtatcACTGCACCGAATGCGGCAAGTGTTTCAACAACTTGTCTTCTCTGCACTGTCATGGAAAAAACTATCACAGCAAGTAGATCGTCTTCAGATCCGCCGCTTTCAGGCGTCTGGAGCACCGAGGGTTTTCCCGGTGGAGTAAAGAATGCATCCATACATCCGTCGGCCCAGAAGAGTGGACCACACAGCCCTCGTGAGCCAATCATTCCAACTGATTCAGTGTGCTCTGACTCTTGATCCGTACAGAAGAAGAAACCCAGCAATCTTGGCTGCTACAGCTGAATGAACGCAGGATTTAACTGATTTGACGCAACTAATAAACACAATACGGCAATGTTTGGTTCATCCGAGTTCTTCTTCTAATCTTATTTATAATAGTAATGTACTAGTCAGAGAGCTAGggctctgtgtagtaaatgctGCTGCATCTGAATGCATGTGATGGAGATTTATTGATAATTACTGACGAAATACGCACGGCAAGCGCATTCAATGAACCGTTCAGCCCTACCATTGatgttatttttcacattatacAAGAGTGAATGTTTCACATGCACTACACACTGGTGgccaaatatttgaaataatgtattttctgaAGGAACACtgaatgtatttgaaaaaaaatatatgcagtaaaatatcaatattgcctttaaaagtagttttctAATAAACCAAGTAGTTTGTTTCTGATTCATCACTCCTGTcatgttccttcagaaatcattctaatatgccgatttgcttCTTaattattctgaaatattattggTGATAAATTATTAACAGTCATTCTTTTCATCAAtgcagttaaaaacaaaacggtTTCGCTTAATATATTGGAAACTGAATTATTAGATAAGTACAAAGATGAAGCTGTAAATGATCTGTAATaagcacaaatatatttactttcaCTTAAATGAATTGAGTTCAGCCTTGTTTAATAAAAGGTATAAAGTTATAGAGGCTGTGTGTTAATCTTGCCTACGGAAATGTGAAGCAGCacaaaaaataatccaaaaaaataaattgtgagcAGCAAATCGGATtatgagaatgatttctgaaggaccagtAGAAGAGCAGCATAAAAGCAATCTGCTATCTGTACATGATACGGATCTACCCCACAAACCTAATCCTATAGCATTGTCAcgccaaagtccatttttgcatCCACTTTCATGAGATCAGgtagaaattattttttctatttgtcaAATACAGCTGGAAAGACAAATTCTAATGTAAAGTAGTATATTggtcatttattaatgttaaataaatacataatagatGGCATTTTTCTATCATTTTGATCGGGGTTAGTGGGCTGCTTTGTGCCAGAAAGTCCAGGGCCACTGCTTAGGCTCAGTCTGCTCCTATTGCTTCATCCTCACCAAATGAGGCACAATAATGCATCAAGCAATAAAATATCATCTGGACAAATCCTTCCTAGCCAGACGTTGCAAGTCACATGACAAAGAAACATTTGCTAAAGTTTAGAGTGAAGTAAGTTCATCAGATTCAACTGTGATTCAACTCGGAGATGGAGTTGCTCCCCAAAGAAAggttattattgtgttttcttatgagtttcatttcatgtttaGTTGCCTTATAACGCATATGAGTCAAAAGTAGAAGCTTTTACAAACTTGTTCAGGAAGTTGAAGGAGAAGCTGTGACCTCTCTCAAGGTCTGAGATTGAATGAGTTACTCTAAAAAAAGACGCATACTTTGTAATCGATCTTTCTGTGCTTCTCTTTTATGTAGGAATGAATACCTGAACCCCGTATTAAACGAGCCCCAGGGCTAAATTATGAAAGATCATAGTATTGATTGGCTCTAATGTTAACGGTGACTATTCAGCGGTTTTAAATCTGAAGTATTTCCGTACCTTCTTGATTTGCAAACGTGCCACACGTAAAAGGTTGCTCGTTCTTGTGAATATCCCTTGAAAAGATTGTTTAAGTGACAGTGCTAAACATCAGATGAATGCACTGAAAGACATCGATCTTAATTTCCAAGATGAAGCACGGTATAGTCGCacagaattgtaatatttactcTATATTTGAATCCATTTGTGGTACTAACCCCAGGACTGTTTTATTCGTGATTTCCGTTCCATCTCCTCGTGTGACTCAGTTTCATCATTGTCTAATTGTTTATGTTCAGGTGAGTCGTGCCAATTATCCTCATTCACCCTCCCTATATAGGCTGCGCTCTGTTTAGTGTTCACCGTCCGTTCTCGTCAATGTTAACTACATCTCTGTAAAGGTGTGTGCTCCACCCTGCTTGTTGGATTATCTTTACGTGGTTTATTAAAGACTGATAACTATTA

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF57.1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23578 False 1457 lncRNA 0.43 1 1065482 1066938
XM_043229981.1 True 5327 mRNA 0.42 4 1065482 1075327

Neighbor

gene id symbol gene type direction distance location
LOC122330038 NA coding downstream 3414 1059281 ~ 1062068 (-)
LOC122330129 LOC107568427,LOC107701867 coding downstream 8294 1051304 ~ 1057188 (-)
LOC122330314 NA coding downstream 40195 1020234 ~ 1025287 (-)
LOC122332552 LOC107716870,LOC107683751 coding downstream 61066 1000565 ~ 1004416 (-)
LOC122332431 LOC107712036 coding downstream 111610 943757 ~ 953872 (-)
LOC122330439 NA coding upstream 771 1076098 ~ 1078256 (-)
LOC122332629 NA coding upstream 34127 1109454 ~ 1125863 (-)
ccdc134 ccdc134,si:dkey-167k11.5,LOC107561099,LOC107674487,LOC107561218 coding upstream 53247 1128574 ~ 1133787 (-)
LOC122332636 LOC107674470,LOC107731661 coding upstream 74631 1149958 ~ 1152762 (-)
LOC122330600 polr2f,LOC107727050 coding upstream 151876 1227203 ~ 1229840 (-)
G15808 NA non-coding downstream 103752 960955 ~ 961730 (-)
G15804 NA non-coding downstream 109561 955502 ~ 955921 (-)
G15792 NA non-coding downstream 170034 894934 ~ 895448 (-)
LOC122330753 NA non-coding downstream 204558 859275 ~ 860924 (-)
G15779 NA non-coding downstream 216186 848391 ~ 849296 (-)
G15866 NA non-coding upstream 8113 1083440 ~ 1084810 (-)
G15875 NA non-coding upstream 17173 1092500 ~ 1094729 (-)
LOC122330728 NA non-coding upstream 36555 1111882 ~ 1114305 (-)
G16073 NA non-coding upstream 78973 1154300 ~ 1154580 (-)
G16064 LOC107711804,LOC107563722,LOC107674484 non-coding upstream 144337 1219664 ~ 1221960 (-)
LOC122332559 NA other downstream 49132 1015147 ~ 1016350 (-)
LOC122332393 NA other downstream 166170 895845 ~ 899312 (-)
G15773 NA other downstream 234439 828759 ~ 831043 (-)
LOC122330246 NA other downstream 247657 812249 ~ 817825 (-)
G15742 NA other downstream 396157 666300 ~ 669325 (-)
G16048 NA other upstream 34164 1109491 ~ 1114702 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other upstream 59483 1134810 ~ 1149893 (-)
G16054 mei1,LOC107674470,LOC107731661 other upstream 72262 1147589 ~ 1152760 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other upstream 88989 1164316 ~ 1183588 (-)
G16172 NA other upstream 545637 1620964 ~ 1652366 (-)

Expression


Co-expression Network