LOC122330129 (LOC107568427,LOC107701867)


Basic Information

Item Value
gene id LOC122330129
gene name LOC107568427,LOC107701867
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1051304 ~ 1057188 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043226969.1
CTCAGTAACATCGAAAGCTGGAGTCCTGATAGATCTGGGAAAGGCTCAATAGATGGCGGTAATGCTCTGTTTGTGATCGTGATCCGTCAGTAACAACGAGGAAGAAGAAGACGACCAGTTTCTCCCTGATGTCTGTCGTTTTGTCCTGGTGTCGTTTTAATACAAACTGTTAGAAAGATAGTTTAGCGTTTTTGAATCCAGTCAGTAAAAACCCGTGATATTCACAGCCGTGACTGAGTTTTGAAGCGAGCAGGAATATCTGGAGGAGAATCATCTGAACTGAGATCTGCTGCTGTGAAGATGGTGTttgttaaagaggagagtgaagagAGCACGAGTGAACCAGAAACATGGAGAATAAATCCCAAGAACCCAGAAACCTGGAGAATAAAACGGGAGGAACCAGAAtctttaagaataaaaaacGAGGAACAAGAAGgcCTGATGAAAGTGAAAGAGGAAAGACAAGATCTGAATGAAGGGGAGGAGAAGCATCAGGATCAGAAAGATGATGAAGAACAATCGGTAAATTGCTCCAAAACTGAAAAGACAGAAGTCATAaggcctttcagctgctctgaaTGTGGAAACACTTTCAAACATAAAAGAAGCCTTACATACCACGCATTAATCCACGCTGGAATAAAGCCTTTCACCTGCTCtgagtgtgggaagagttttaCACAGAAAAAGCAACTCAGCGATCATATGCTTGTTCACTCTTCAGAAAAGCCTTTCCCCTGCCATCAGTGCGGAAAAACCTTCACGCGTAAAGCAAACCTTAAAAACCACATGATAATTCATAGCGGGGAaaagcctttcagctgctctcagtgcggaaaCACTTTTACATGTAAAGGAAGCCTGAAGAAACACATGTTGATTCACGCTGGGATAAAGCCGTTCGtctgctctcagtgcggaaagagttttGTGCAGAAAGGACACCTCAAGATTCATCTGGTGACCCATTCTTCAGAaaagcctttcagctgctctcagtgcggaagGAGTTTTACTCAGAGAAACCAGTTCAATGATCATATGCTCATTCACTCTTTAAAAAAGCCattcagctgctctcagtgcggaagGAGCTTCTCGCacgaaaaaaaacttaatgatCATATGCGCGTTCACTCTTCAGAAAAGCCTTTCTCCTGCCCTCAGTGCGGAAACACGTTCACGCGCAAAGCAAGCCTCAACAATCACATGATAATTCATAGCGGGAAAAAGCCTTATTcctgctctcagtgcggaaaCACGTTCAAACGGAAAGGATGCCTGAAGAATCACATGTTGATTCACAATGGAATAAAGTCTTTTAcctgctctcagtgcggaaagagtttcacGCAGAAAGGACATCTCACGGTTCACCTGATAACTCACTCTACAGGAaaacctttcagctgctctcagtgcgggAACACTTTCAAACGTAAAGAATGCCTTAAGAGTCACATGTTAATTCACGCTGGGAAAAAGCTTTTCACCTGCTCTGTGTGAGAAGTGTTTCCTCTGTAACCAAGGACTTAATGGTAAAGAGAGAATTTAGCCTGATCTGTGTGAGAAgggttttaaaaagaaagctgAACTCACTGTGGTGTAGGGAACGTGAACCGATCCGGACAGATTTCTAAGGGCACGTGAAAATAATGCTTGAGAGTGAAAACTGTGGTGTGAGTGTGGGGCGAGCCAAGTACTCTATACAGAAAAACGTGTGACGGAAATAACGTGAAGCAACATAGCCTCACTTGCAAGGTGGAGAGtgtatttctgtcattattaataatattattattatttcgttTTGCCGTTGTTTTTCATGagattttgtttgctttttgtcattCATAACCATTTTCAATGAAATACTGAAAACGTGCATTTTGATATTCATTTACAGTTCACTGTCAGTTTGTCTCAAGCCTAGAATTATAATCTTTATAGTTCGGCTTCCTCTGAACGGTTTTTTGCAAACTGTTTCACTGTATGTGACTTTACATGGAAAAGTTTCAAATCTGATGTGCAGCTATGAatgcaaaattagtttttgcatgaaatgcatttctacacaaataaatgtactgGATACAAACAAATGTGTCTATTCCTTCTCTGTGTACTATAGGGTTAAGATCTCCCAGCAAACGACACACTTGGATGCtactcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgcatctTGAGTTCTCTGTCGGTGTCTGGCTGATTGCTCTGATTGAGAAAACCTGTGGGTTTAATGCGTTCCTTTCGGTCTCATggttaaatacatttcaaaggggtaggtgaattttttttttggtttgattgttttataattGGGGTATAATTTTAGAGATTCTAAAAAGCCCCTCTGGCATGAAATTGGTTATTAGGCctagtgtgttgtgattggctaaaCCACCTTTAGTGCAAAATGTGGAAATGTCTAAATCTCCCGCCATTGCATGTGCTCCAGTTGTATCGTAAACAATGGCGTCATCACATTTCTCTTTACAAATCCTCATTTTATGCTTCTAATTTGTGGTCTGCATTTTGTCTTGCTGTCCGTCTCCATGCTTCGGCAATcaacaataattatttgtgCATGAGCTACGCCGAAGTCCTGCATCATCCGCCTGGAATGTCTTCTGCATACGACAGTCAACAGAAGTGAGATAAAAcagtttataacattttaaataaagatatttttcataCATAAGTGCATTGCTTTGCTACAATTGAACATGCTCGGAAGAACCTggacacacatacatacatacaggggttggacaatgaaactgaaacaggCCAATGCCAAAGCTAAATCTGATCAGTCTTCATTGATTGCACActccaccagtaagagcagatTGTAGAGGTTTAATTATCagagtaatagcacagttttgcttaaaatatagcaatgcacacaacattatgtgAGTTCAAAAGAGAACAAATTGTTGGTTCTCGTCTTGCTGGCGCATcggtgacccagacagcaagcgTTTGTGACGTATCAAGAGACACGGTATCCAGGGGACCTAGAAGGAccaaccacatccaacaggagtaactaggacgcaagaggaagctgtctgaaagagATGTCTGGGTGCTAACCcggattgtatccaaaaaatataaaactacaaCTGCCCTACATCAAGTCTCCCTTGTTTTTGCATCTAAATTTCAAGTTACATTCACTTCCATTTCTATGCATGTGAACGTGGAAGATTAAAAAACAAGCTCAAGCCAATTTCCCCTGCC

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF26.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043226969.1 True 3295 mRNA 0.41 2 1051304 1057188

Neighbor

gene id symbol gene type direction distance location
LOC122330314 NA coding downstream 26017 1020234 ~ 1025287 (-)
LOC122332552 LOC107716870,LOC107683751 coding downstream 46888 1000565 ~ 1004416 (-)
LOC122332431 LOC107712036 coding downstream 97432 943757 ~ 953872 (-)
LOC122332421 NA coding downstream 111626 937243 ~ 939678 (-)
LOC122332401 LOC107573032 coding downstream 136048 911838 ~ 915256 (-)
LOC122330038 NA coding upstream 2093 1059281 ~ 1062068 (-)
LOC122330439 NA coding upstream 18910 1076098 ~ 1078256 (-)
LOC122332629 NA coding upstream 52266 1109454 ~ 1125863 (-)
ccdc134 ccdc134,si:dkey-167k11.5,LOC107561099,LOC107674487,LOC107561218 coding upstream 71386 1128574 ~ 1133787 (-)
LOC122332636 LOC107674470,LOC107731661 coding upstream 92770 1149958 ~ 1152762 (-)
G15808 NA non-coding downstream 89574 960955 ~ 961730 (-)
G15804 NA non-coding downstream 95383 955502 ~ 955921 (-)
G15792 NA non-coding downstream 155856 894934 ~ 895448 (-)
LOC122330753 NA non-coding downstream 190380 859275 ~ 860924 (-)
G15779 NA non-coding downstream 202008 848391 ~ 849296 (-)
G15866 NA non-coding upstream 26252 1083440 ~ 1084810 (-)
G15875 NA non-coding upstream 35312 1092500 ~ 1094729 (-)
LOC122330728 NA non-coding upstream 54694 1111882 ~ 1114305 (-)
G16073 NA non-coding upstream 97112 1154300 ~ 1154580 (-)
G16064 LOC107711804,LOC107563722,LOC107674484 non-coding upstream 162476 1219664 ~ 1221960 (-)
LOC122332559 NA other downstream 34954 1015147 ~ 1016350 (-)
LOC122332393 NA other downstream 151992 895845 ~ 899312 (-)
G15773 NA other downstream 220261 828759 ~ 831043 (-)
LOC122330246 NA other downstream 233479 812249 ~ 817825 (-)
G15742 NA other downstream 381979 666300 ~ 669325 (-)
LOC122332622 LOC107701866 other upstream 8294 1065482 ~ 1075327 (-)
G16048 NA other upstream 52303 1109491 ~ 1114702 (-)
LOC122329780 mei1,LOC107674482,LOC107561079,LOC107674470 other upstream 77622 1134810 ~ 1149893 (-)
G16054 mei1,LOC107674470,LOC107731661 other upstream 90401 1147589 ~ 1152760 (-)
LOC122330455 kdelr3,LOC107731665,LOC107563718,LOC107679478,LOC107674488 other upstream 107128 1164316 ~ 1183588 (-)

Expression


Co-expression Network